Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acytostelium_20leptosomum_20[genbank_20GCA_5F900092245.1_202017-01- 02] 28,227 sequences; 57,256,845 total letters Query= NC_004002.1 Length=149955 Score E Sequences producing significant alignments: (Bits) Value seq19 163 3e-35 >seq19 Length=770976 Score = 163 bits (180), Expect = 3e-35 Identities = 569/881 (65%), Gaps = 14/881 (2%) Strand=Plus/Minus Query 13579 TTTTTTGATATTCACTAACTCTTTTTTCAAAGAAGTTAGTTTTACCTTCCAGTGATATAT 13638 |||||||||| |||| || | ||| |||||||| || ||||| |||| ||| || || Sbjct 360853 TTTTTTGATAATCACCCACACGTTTCTCAAAGAAATTGGTTTTGCCTTGCAGGGAGATCA 360794 Query 13639 TTTCCATAAAATCAAATGGATTTATTGACAT-AAACACTTTATCACAACCTAGTTCTAAT 13697 | |||||||||||||| ||| || || ||| | | | ||| | |||| ||||| Sbjct 360793 TCTCCATAAAATCAAACGGA-TTGGTGGCATGATATATTTTGGTATAACCCAGTTCCTGC 360735 Query 13698 AGTAATCTATCAGCAATAAACTCAATATATTGAGACATTAAATCACAATTCATACCTATT 13757 || |||| || |||| |||||||||||| || ||||| | | |||||| || || Sbjct 360734 AGCCATCTGTCTGCAACAAACTCAATATACTGTGACATCAGTTTTGCATTCATCCCGATC 360675 Query 13758 AGTTTTACAGGAATTATATTGGTTAAAAATTCTTTTTCTATAGACACAGCCTCTTTTATA 13817 || || || | || || | |||||| ||||| || || || || ||| Sbjct 360674 AGGGCAACCGGCAAGGCATCTGTAATAAATTCCTTTTCGATTTCTACCGCGTCGCGGATA 360615 Query 13818 ATAATTGTAATAATCTCATTAGAAGGAGGATATTTT--AGATGTTTAAAAATTAAACACG 13875 || || | || | | || |||||| || |||| ||| | || | Sbjct 360614 ATTCCATGAACGACTTCCT--GGCTCAGTTTATTTTTGAGCATTTTATAAAGCAGGCAGG 360557 Query 13876 CAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCTG 13935 |||| |||||||| | ||||||||||| ||| | || || ||| |||| |||| Sbjct 360556 CAAATTCACAATGCATCCCCTCATCTCTGGAAATCAACTCATTACTAAAGGTTAGCCCTG 360497 Query 13936 GCATCAATCCTCGtttttttAACCAAAATATTGCAGCAAATGACCCGGAAAAGAATATTC 13995 |||||| |||| |||||| ||||| || || | | || |||| ||||| || | Sbjct 360496 GCATCAGGCCTCTTTTTTTCAACCAGAAGATCGAACAGAAGCTCCCGCTGAAGAAAATGC 360437 Query 13996 CCTCAACTGCAGCAAACGCTATTAATCGTTCTCCAAACGATGCTTTTTTGTTCGATATCC 14055 | || ||||| || || || | || ||||| |||| ||| | | |||| Sbjct 360436 CTTCCACTGCGGCGAAAGCCACCAAACGTTCGGCAAA------ATTTCCGCCCTCAATCC 360383 Query 14056 ATTTTCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTTTCAATAGCATTAAATA 14115 | |||||||| | |||||| || | | || | || || | |||| || | Sbjct 360382 AGCGCAATGCCCATTCTGCTTTTTTCTTTACACAAGGAACCGTCTCTACGGCATGGAACA 360323 Query 14116 AATATTCCTTCTCTTTAGTACTTGAAATGTATGTATCAATAAGTAAGCTATACATTTCAG 14175 || || |||| || | | ||| || ||||| || || | ||| |||||| Sbjct 360322 GCCTGTCTTTTTCTTCAGGATCTTTAATATAGGTATCGATCAGCAGCGCATAGGTTTCAG 360263 Query 14176 AGTGTATGTTTTCCATAGCTATCTGAAAACCATAAAAGCATCTAGCTTCCGACCATTGTA 14235 |||| ||||||||||| ||||| || |||||||| || | ||||| | |||| Sbjct 360262 AGTGGATGTTTTCCATCATGATCTGGAAGCCATAAAAACAACGGGCTTCGGGAAGCTGTA 360203 Query 14236 CTTC-CGAGTAAAATCTTTCGGCCAAATTTTCATTAACTATACCATCACTAGCTGCAAAA 14294 |||| | | || | | | || | |||||||| || || || ||||| || |||||| Sbjct 360202 CTTCGCTCATGAAGT-TCACTGCAAGGTTTTCATTTACAATGCCGTCACTTGCAGCAAAA 360144 Query 14295 AATGCCAATATGTTTTTAATAAAGTATTGCTCTTCATTGTTGAGTTTTTTCCAATCGGAT 14354 || || | ||| | ||| || | |||| | | || | || | ||| | Sbjct 360143 AAAGCAAGTATATGAGAAATGAAATGACGCTCGCCTGTATTTAAGTTGTCCCAGTGCTTC 360084 Query 14355 AAATCCTTAGAAAGATCTACTTCATCAACTGTCCAAAAACTAGCGACAGCTTTTTTATAC 14414 || | |||||| || | ||| ||| | ||||| ||||| || || || |||||| Sbjct 360083 TGGTCATCAGAAAGGTCAATTTCTTCAGCGGTCCAGAAACTTGCTTCACTCTTCTTATAC 360024 Query 14415 ATTACCCATATTTCTTTATATAATATAGGAAAAACTACAAA 14455 ||| |||| ||||| ||| ||||| |||| ||||| Sbjct 360023 ATTTCCCAGATTTCAGGGTATTTAATAGGCAAAAGAACAAA 359983 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 479558733971800