Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acytostelium_20leptosomum_20[genbank_20GCA_5F900092245.1_202017-01- 02] 28,227 sequences; 57,256,845 total letters Query= NC_004928.1 Length=167560 Score E Sequences producing significant alignments: (Bits) Value seq2516 223 4e-53 seq2261 136 4e-27 >seq2516 Length=21774 Score = 223 bits (246), Expect = 4e-53 Identities = 164/190 (86%), Gaps = 1/190 (1%) Strand=Plus/Minus Query 62056 TTAGCCATTATAGACTCTCAGTAAAGGTACGAGCGATAACGTCGCGCTGCTGTTCCGGAG 62115 |||||| ||| || || || ||||||||||| ||||| |||||||||||||||||||| | Sbjct 1967 TTAGCC-TTACAGGCTTTCGGTAAAGGTACGGGCGATTACGTCGCGCTGCTGTTCCGGCG 1909 Query 62116 TCAGAGAGTTAAAGCGAACTGCATAACCGGATACACGGATGGTCAGCTGCGGATATTTTT 62175 |||||||||| ||||| || || || ||||| ||||| |||||||||||||||||||||| Sbjct 1908 TCAGAGAGTTGAAGCGTACCGCGTAGCCGGAAACACGAATGGTCAGCTGCGGATATTTTT 1849 Query 62176 CCGGATGCTTAACTGCATCTTCCAGAGTTTCGCGACGCAGAATGTTAACGTTCAGGTGTT 62235 ||||||||| ||| || || ||| |||||||||||||| | ||||||||||||||| | Sbjct 1848 CCGGATGCTCAACCGCGTCCAGCAGGGTTTCGCGACGCAGCACGTTAACGTTCAGGTGCT 1789 Query 62236 GACCACCTTC 62245 |||| ||||| Sbjct 1788 GACCGCCTTC 1779 >seq2261 Length=3986 Score = 136 bits (150), Expect = 4e-27 Identities = 137/178 (77%), Gaps = 0/178 (0%) Strand=Plus/Minus Query 62071 TCTCAGTAAAGGTACGAGCGATAACGTCGCGCTGCTGTTCCGGAGTCAGAGAGTTAAAGC 62130 ||| ||| |||||||| | ||||| || |||||||||| ||||| |||||||| | Sbjct 679 TCTGAGTGAAGGTACGGGTAATAACATCCTGCTGCTGTTCTTTGGTCAGGGAGTTAAAAC 620 Query 62131 GAACTGCATAACCGGATACACGGATGGTCAGCTGCGGATATTTTTCCGGATGCTTAACTG 62190 | || || || || ||||||||||||||||||||||||||||||||||| | | | | Sbjct 619 GTACGGCGTAGCCAGATACACGGATGGTCAGCTGCGGATATTTTTCCGGGTTTTCCATCG 560 Query 62191 CATCTTCCAGAGTTTCGCGACGCAGAATGTTAACGTTCAGGTGTTGACCACCTTCAAT 62248 | || ||| ||||||| || | ||| ||||||||||| ||||||||||| || Sbjct 559 CGTCGAGCAGCATTTCGCGGTTCATGACGTTCACGTTCAGGTGCTGACCACCTTCGAT 502 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 535874856518400