Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acytostelium_20leptosomum_20[genbank_20GCA_5F900092245.1_202017-01- 02] 28,227 sequences; 57,256,845 total letters Query= NC_005083.2 Length=244834 Score E Sequences producing significant alignments: (Bits) Value seq4092 147 3e-30 >seq4092 Length=20610 Score = 147 bits (162), Expect = 3e-30 Identities = 955/1498 (64%), Gaps = 67/1498 (4%) Strand=Plus/Minus Query 7763 ATTCATTTTCACGACCTTGATTA-TAGCCCACTATTCCCGCAATTCAACTGTATGCTTAT 7821 || || | ||| ||||| ||||| | |||| | |||||| |||||||| ||||| || Sbjct 17682 ATCCACTATCATGACCTCGATTACTCGCCCT-TCTTCCCGATGTTCAACTGCATGCTGAT 17624 Query 7822 CGACATCAAGGGGATGTTCGAAGGTGGG-TTCAAAATGGGTAACGCTGAAATTGAAGAGC 7880 ||| | || || ||| | || ||| || || ||||| ||||| || || || || Sbjct 17623 CGATCTGAAAGGCATGCT-GACCCAGGGCTTTAAGATGGGCAACGCGGAGATCGAGCCGC 17565 Query 7881 CAAATAGCATTGCGACTGCTGCGACTATCGTAACTCAGATCATTCAGCAAGTAAGCAGCC 7940 | || || | || || | | | | |||||||| || || ||||| Sbjct 17564 CGAAGTCTATCTCTACCGCCACCGCGGTGACGGCGCAGATCATCGCCCAGGTCGCCAGCC 17505 Query 7941 ACATCTATGGCGGCAACACAATCAATCGCATCGACGAAGTGCTTGCTCCTTATGTTCGCA 8000 | || || ||||||| ||| ||||| |||||||| |||||||| || || ||||| Sbjct 17504 ATATTTACGGCGGCACCACCATCAACCGCATCGATGAAGTGCTGGCGCC----GTTCGTC 17449 Query 8001 AGTCGTA--CTACAAATGGT-TAG--AAATCG--GTCGAGAAGAACATCCAGATTCAGAT 8053 || || | || |||| | | | |||||| | ||| | | |||| | ||| Sbjct 17448 AG-CGAAAGCTTCAAAAAGCATCGCAAAATCGCCGAAGAGTGGCAGATCCCG-----GAT 17395 Query 8054 TCAAAAGCCGCGATCTTTGCTCGTAAACGTGTTGAGAAAGAAACGTATGATGCGTTTCAG 8113 | ||| | | ||| || ||| || ||||| || || || || ||| Sbjct 17394 GCCGAAGGC------TATGCCCGCGCCCGTACCGAAAAAGAGTGCTACGACGCCTTCCAG 17341 Query 8114 ACTTTTGAATACCAAGTCAATACAATGCAGACTTCAAATGGTCAGACACCATTCACGACA 8173 | | || || | ||||| ||| |||| || | || || ||||| || ||| || Sbjct 17340 TCGCTGGAGTATGAGGTCAACACACTGCATACCGCCAACGGCCAGACGCCGTTCGTCACC 17281 Query 8174 ATCAACTTCGGTTTAGGTACTTCGTGGGAAGAGAAACTGATTCAGAAAAGCATTCTGCAA 8233 || ||||| | || || |||||| | ||||| ||| | ||||||| Sbjct 17280 TTCGGGTTCGGCCTTGGCACCAGCTGGGAATCGCGGCTGATCCAGCAGTCGATTCTGCGC 17221 Query 8234 AATCGTATTGCTGGTCTAGGCAAGACTAAGAAAACTGCTATCTTCCCGAAACTTGTTTTC 8293 || || ||||| || || || || | | ||||| || | ||||||||||| || ||| Sbjct 17220 AACCGCATTGCCGGCCTCGGTAAAAATCGCAAAACCGCGGTGTTCCCGAAACTGGTGTTC 17161 Query 8294 ACGTTGAAAGACGGTGTTAACTTGAAAGAAGGTGATCCTTGTTACGGAATCAAGAAGCTT 8353 || | ||||| | ||| || || || || |||| ||||| |||| Sbjct 17160 GCGATCCGCGACGGCCTGAACCATAAGTTCGGCGACCCGAACTACGACATCAAACAGCTG 17101 Query 8354 GCTCTTGAGTGTGCAAGTAAACGCATGTACCCAGACATTTTGAACTATGAAAAGCTAGTT 8413 || || ||||| || || || ||||||||||| || || | ||||| || || | || Sbjct 17100 GCGCTGGAGTGCGCCAGCAAGCGCATGTACCCGGATATCCTCAACTACGATCAGGTGGT- 17042 Query 8414 GAAA--CAACTGGCGGATTCAAGTCGCCTATGGGATGTCGTTCATTCTTGGGTGAATGGA 8471 |||| || | || | || || |||| ||||| || || ||| | || | |||| Sbjct 17041 GAAAGTCACCGGGTCGTTTAAAA-CGCCGATGGGCTGCCGCAGCTTCCTCGGGGTATGGG 16983 Query 8472 AAAATGAAGATGGCGA--AACTGTATTCGACGGTCGTAATAACTTAGGTGTTGTTTCTAT 8529 |||| || | ||||| | || || || || || |||||| | || || | | | Sbjct 16982 AAAACGAGAACGGCGAGCAGGTGCAT--GATGGACGCAATAACCTCGGCGTGATCAGTCT 16925 Query 8530 AAACATCCCGCGTATTGCAATCGAAGCGTCGGGAGACACTGAA--CGT-TTCTTCGAGAT 8586 ||| | ||||| || || | |||||| || || |||| || |||| | | | Sbjct 16924 CAACCTGCCGCGCATCGCCCTGGAAGCGAAAGGCGA---TGAAGCCGCCTTCTGGGCGCT 16868 Query 8587 CTTGCACGAACGTTGTACA-CTAGCTTACGAAGCGTTGATGTTGCGTATCAAGCGTTTTG 8645 || |||| || | || || || | ||||| ||||| |||||| || | | Sbjct 16867 GCTGGACGAGCGCC-TGCAGCTGGCGCGCAAAGCGCTGATGACCCGTATCGCCCGCCTGG 16809 Query 8646 ACGATGTTACTGCATCAGTTGCACCGATTCTGTACTGTGAAGGCGCTATGGGCGTACGCT 8705 | | || | || || || ||||| ||||| |||||||| ||||| || Sbjct 16808 AAGGAGTGAAGGCTCGCGTGGCGCCGATCCTGTATATGGAAGGCGCCTGCGGCGTGCGGC 16749 Query 8706 TGAA-GCCAACTGATAAAGTCAGTGAAGTGTTCAAGAACGGTCGCGCAAGTATCTCACTC 8764 |||| ||| || || | ||| || | ||||| ||||| ||||| || || || Sbjct 16748 TGAAAGCCGAC-GACGACGTCTCCGAGATCTTCAAAAACGGCCGCGCGTCCATTTCTCTG 16690 Query 8765 GGTTACATCGGTCTGCATGAGGCTGT-AACGCTGCTTT-CGCCTGACAAAGACATGCAC- 8821 || || |||||| | ||||| | | || || ||| | || | || | | ||| || Sbjct 16689 GGCTATATCGGTATCCATGAAACCATCAATGC-GCTGTACGGCA-ACCAGCATATGTACG 16632 Query 8822 ACATTCGAGTCGCAGCACAAGCAATTCCTTGCTGAAAAGATTGTTGAGACGCTTAGAGCG 8881 ||| |||| ||| || || || | | || || || || ||| | | ||| Sbjct 16631 ACAG-CGAGGCGCTGCGTGAGAAAGGCGTAGCC------ATCGTCCAG-CGCCT-GCGCG 16581 Query 8882 TACACAGACGCAT---GGAAAGAACTGACTGGCTACGGATTCAGTCTATACAGCACGCCA 8938 || | | || | |||| ||| || |||||||| || || || ||||||||||| Sbjct 16580 -ACGCCGTCGATTTGTGGAAGGAAGAAACCGGCTACGGCTTTAGCCTGTACAGCACGCCG 16522 Query 8939 AGCGAATCGCTATGTGATCGTTTCTGTCGTCTCGATCAAGAGAAATACGGTATCATT--A 8996 |||||| || || ||||| ||||| |||||||| | | | || | | | Sbjct 16521 AGCGAAAACCTGTGCGATCGCTTCTGCCGTCTCGACACCGCCGAGTTTGGCGTGGTGGAA 16462 Query 8997 CGGGTATCAACGACAAAGACTATTACACGAACTCGTTTCACTTAGATGTGTTCAAGAAAG 9056 ||||| | |||||||| || ||||| ||| || ||| | || ||| ||||| | Sbjct 16461 GGGGTAAC--CGACAAAGGTTACTACACCAACAGCTTCCACCTCGACGTGGAGAAGAAGG 16404 Query 9057 TGAATCCGTTCGAGAAGATTGATTTCGAAGCAGCATACCCAATTCATGCGAATGGTGGTT 9116 | || |||| ||| ||||| ||||||||||| | ||||| | || || || || | Sbjct 16403 TCAACCCGTACGATAAGATCGATTTCGAAGCGCCGTACCCGCCGCTGGCCAACGGGGGGT 16344 Query 9117 TCATCTGCTATGCTGAATTCCCGAACATGCGAGACAACATCAAAGGTCTAGAGCGCGTAT 9176 |||| ||||| | || | |||||| || | | ||| |||| | || || ||| | Sbjct 16343 TCATTTGCTACGGCGAGTACCCGAATATCCAGCATAACCTCAAGGCGCTGGAAGACGTGT 16284 Query 9177 GGGATTACGCATATAAGAAAGTTGCGTACTTCGGCACAAACACGCCGATTGACCAGTG 9234 |||||||| ||| || | || |||||| ||| || || |||||||| || |||| Sbjct 16283 GGGATTACAGCTATCAGCACGTGCCGTACTACGGGACCAATACGCCGATCGATGAGTG 16226 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 783064407990480