Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acytostelium_20leptosomum_20[genbank_20GCA_5F900092245.1_202017-01- 02] 28,227 sequences; 57,256,845 total letters Query= NC_005135.1 Length=173591 Score E Sequences producing significant alignments: (Bits) Value seq330 120 3e-22 seq85 107 2e-18 seq2516 93.3 5e-14 seq11964 89.7 6e-13 seq14376 87.8 2e-12 seq272 84.2 2e-11 seq2261 82.4 8e-11 >seq330 Length=26733 Score = 120 bits (132), Expect = 3e-22 Identities = 207/297 (70%), Gaps = 4/297 (1%) Strand=Plus/Minus Query 6938 CCGTGAGTGAGATGGCCGCCGCAGTCCAAGGACATAGCGAGAACCGAATCACCCGGCTTC 6997 |||||||| || |||||||| ||| | |||| |||| || | || ||||||| | Sbjct 8369 CCGTGAGTCAGGTGGCCGCCCTGCGCCAGGTTCATACCGAGCACGGTGTCGCCCGGCTGC 8310 Query 6998 AGGAGTGCTTGGTAAACTGCCTGGTTTGCTTGTGAACCGGAATGAGGTTGAACGTTTGCG 7057 || || || ||| || || ||| || || || ||||| || || || ||||| || Sbjct 8309 AGCAGCGCGGTGTAGACGGCAAAGTTAGCCTGGGAGCCGGAGTGCGGCTGGACGTTAGCA 8250 Query 7058 AAATTGCAACTAAACAGTTCTTTAGCACGCTCAATTGCCAGGTTCTCGATTTCATCGGCT 7117 | | | ||||||||||| || || || |||||||| | || | | ||| | Sbjct 8249 TAGTCAGCGCCGAACAGTTCTTTCGCGCGGTCGATTGCCAGCTGTTCAACCACGTCGACG 8190 Query 7118 TTTACGCAGCCGCCATAATACCGTTTGCCCGGATATCCCTCAGCATACTTGTTGGTAAAA 7177 | | | |||||||| || || || ||||||||||| || |||||||| |||||||| | Sbjct 8189 TATTCACAGCCGCCGTAGTAACGCTTGCCCGGATACCCTTCAGCATATTTGTTGGTCAGC 8130 Query 7178 ATAGAACCCTGTGCTTTCATAACATCGTCTGAC--ACATAGTTTTCGGACGCAATCA 7232 ||| ||||| || | |||||| || | ||| ||||||||||| || |||| Sbjct 8129 TGAGAGCCCTGCGCCTGCATAAC-GCG-CGGACTGGTGTAGTTTTCGGAGGCGATCA 8075 >seq85 Length=367292 Score = 107 bits (118), Expect = 2e-18 Identities = 151/210 (72%), Gaps = 8/210 (4%) Strand=Plus/Plus Query 6986 TCACCCGGCTTCAGGAGTGCTTGGTAAACTGCCTGGTTTGCTTGTGAACCGGAATGAGGT 7045 || ||||||| ||| ||||| || | || |||||||| || ||||||| || Sbjct 96956 TCGCCCGGCTGCAGCAGTGCCAGGAATACGGCCTGGTTCATCTGGCTGCCGGAATTCGGC 97015 Query 7046 TGAACGTTTGCGAAATTGCAACTAAACAGTTCTTTAGCACGCTCAATTGCCAGGTTCT-- 7103 || || || || | | ||| | ||||||| ||| || ||||| || ||||| |||| Sbjct 97016 TGCACATTAGCATATTCGCAGTTGAACAGTTTTTTGGCGCGCTCGATGGCCAG-TTCTTC 97074 Query 7104 --CGATTTCATCGGCTTTTACGCAGCCGCCATAATACCGTTTGCCCGGATATCCCTCAGC 7161 |||| |||| | ||||||||||||||| || ||||||||||| ||||| || Sbjct 97075 CGCGAT---ATCGACAAACTGGCAGCCGCCATAATAGCGCTTGCCCGGATAGCCCTCGGC 97131 Query 7162 ATACTTGTTGGTAAAAATAGAACCCTGTGC 7191 ||| |||||||| | || || |||||||| Sbjct 97132 ATATTTGTTGGTCATGATCGAGCCCTGTGC 97161 >seq2516 Length=21774 Score = 93.3 bits (102), Expect = 5e-14 Identities = 132/186 (71%), Gaps = 0/186 (0%) Strand=Plus/Minus Query 65939 TTAAAGGGATTGTGTGAAAGTTCGCGTGATTACGTCCCGTTGTTGCTCAGGAGTTAATGC 65998 ||| ||| || || || || || | ||||||||| || || || || || || | | Sbjct 1961 TTACAGGCTTTCGGTAAAGGTACGGGCGATTACGTCGCGCTGCTGTTCCGGCGTCAGAGA 1902 Query 65999 ATTAAAGCGTACGGCATAACCGGAAACACGGATGGTTAGTTGGGGATATTTTTCTGGATT 66058 || |||||||| || || ||||||||||| ||||| || || ||||||||||| |||| Sbjct 1901 GTTGAAGCGTACCGCGTAGCCGGAAACACGAATGGTCAGCTGCGGATATTTTTCCGGATG 1842 Query 66059 AACGATTGCATCTTCCAGGGTATTTCGGTCAAGAACATTTACGTTGAGATGCTGACCACC 66118 | | || || |||||| | || || || || ||||| || |||||||| || Sbjct 1841 CTCAACCGCGTCCAGCAGGGTTTCGCGACGCAGCACGTTAACGTTCAGGTGCTGACCGCC 1782 Query 66119 TTCAAC 66124 ||| || Sbjct 1781 TTCGAC 1776 >seq11964 Length=703 Score = 89.7 bits (98), Expect = 6e-13 Identities = 180/267 (67%), Gaps = 0/267 (0%) Strand=Plus/Minus Query 6907 GTATATCTTGCCCGAAGCATTCGCTTTGTGCCCGTGAGTGAGATGGCCGCCGCAGTCCAA 6966 ||| | ||||||||| | | ||||| ||||| || || ||||||||| | ||| Sbjct 663 GTACAGCTTGCCCGAGGACGACACTTTGGCGCCGTGGGTCAGGTGGCCGCCGTGGGCCAG 604 Query 6967 GGACATAGCGAGAACCGAATCACCCGGCTTCAGGAGTGCTTGGTAAACTGCCTGGTTTGC 7026 | ||| |||| | | || || | |||| || || |||| || || ||| || Sbjct 603 GCTCATGCCGAGGATGGTGTCGCCGGCGTTCAACAGCGCCAGGTACACCGCACTGTTGGC 544 Query 7027 TTGTGAACCGGAATGAGGTTGAACGTTTGCGAAATTGCAACTAAACAGTTCTTTAGCACG 7086 |||||||| || || || ||||| ||| ||| | || ||||| | || ||||| Sbjct 543 GGACGAACCGGAGTGCGGCTGCACGTTGGCGTAATCGGCACCGAACAGCTGCTTGGCACG 484 Query 7087 CTCAATTGCCAGGTTCTCGATTTCATCGGCTTTTACGCAGCCGCCATAATACCGTTTGCC 7146 ||| || || || |||| | || | | |||||||||| || || || ||||| Sbjct 483 CTCGATGGCGAGCACTTCGACCTTGTCCACGTGCTCGCAGCCGCCGTAGTAACGCTTGCC 424 Query 7147 CGGATATCCCTCAGCATACTTGTTGGT 7173 ||| || || || || ||||||||||| Sbjct 423 CGGGTAACCTTCGGCGTACTTGTTGGT 397 >seq14376 Length=406 Score = 87.8 bits (96), Expect = 2e-12 Identities = 150/215 (70%), Gaps = 7/215 (3%) Strand=Plus/Minus Query 6990 CCGGCTT-CAGGAGTGCTTGGTAAACTGCCTGGTTTGCTTGTGAACCGGAATGAGGTTGA 7048 || |||| ||| || || |||| || || ||| ||||| || |||| || || || Sbjct 370 CCCGCTTGCAGCAGGGCCAGGTACACGGCGCTGTTGGCTTGGGAGCCGGCGTGTGGCTGG 311 Query 7049 ACGTTTGCGAAATTGCAACTAAACAGTTCTTTAGCACGCTCAATTGCCAGGTTCTC---G 7105 ||||| ||| ||| | | |||||||| || || || || || ||||| | ||| | Sbjct 310 ACGTTGGCGTAATCGGCGCCGAACAGTTCCTTGGCGCGGTCGATGGCCAGTTGCTCAACG 251 Query 7106 ATTTCATCGGCTTTTACGCAGCCGCCATAATACCGTTTGCCCGGATATCCCTCAGCATAC 7165 || || || | |||| ||||| || || || ||||||||||| || || || ||| Sbjct 250 ATGTCGACGAACT---CGCAACCGCCGTAGTAGCGCTTGCCCGGATAGCCTTCGGCGTAC 194 Query 7166 TTGTTGGTAAAAATAGAACCCTGTGCTTTCATAAC 7200 |||||||| | || ||||| || || | ||| || Sbjct 193 TTGTTGGTCAGAACCGAACCTTGAGCCTCCATCAC 159 >seq272 Length=21754 Score = 84.2 bits (92), Expect = 2e-11 Identities = 124/176 (70%), Gaps = 0/176 (0%) Strand=Plus/Minus Query 65952 GTGAAAGTTCGCGTGATTACGTCCCGTTGTTGCTCAGGAGTTAATGCATTAAAGCGTACG 66011 ||||| ||||| | ||| || ||| | || ||||| | || | || |||||||| || Sbjct 8208 GTGAACGTTCGGGAGATCACATCCTGCTGCTGCTCGCGGGTCAGCGCGTTAAAGCGGACC 8149 Query 66012 GCATAACCGGAAACACGGATGGTTAGTTGGGGATATTTTTCTGGATTAACGATTGCATCT 66071 ||||| ||||| || ||||| || || | ||||| | || || | | || ||||| Sbjct 8148 GCATAGCCGGAGACGCGGATCGTCAGATTCGGATACTGCTCCGGGTGTTCTATCGCATCG 8089 Query 66072 TCCAGGGTATTTCGGTCAAGAACATTTACGTTGAGATGCTGACCACCTTCAACAGT 66127 ||| | | |||| || ||||| |||||||||||||| || || || || || Sbjct 8088 AGCAGCTTTTCCCGGTTCAGTACATTGACGTTGAGATGCTGTCCCCCCTCCACCGT 8033 >seq2261 Length=3986 Score = 82.4 bits (90), Expect = 8e-11 Identities = 122/173 (71%), Gaps = 0/173 (0%) Strand=Plus/Minus Query 65949 TGTGTGAAAGTTCGCGTGATTACGTCCCGTTGTTGCTCAGGAGTTAATGCATTAAAGCGT 66008 || ||||| || || || || || ||| | || || || || | | ||||| ||| Sbjct 677 TGAGTGAAGGTACGGGTAATAACATCCTGCTGCTGTTCTTTGGTCAGGGAGTTAAAACGT 618 Query 66009 ACGGCATAACCGGAAACACGGATGGTTAGTTGGGGATATTTTTCTGGATTAACGATTGCA 66068 ||||| || || || ||||||||||| || || ||||||||||| || || | || || Sbjct 617 ACGGCGTAGCCAGATACACGGATGGTCAGCTGCGGATATTTTTCCGGGTTTTCCATCGCG 558 Query 66069 TCTTCCAGGGTATTTCGGTCAAGAACATTTACGTTGAGATGCTGACCACCTTC 66121 || ||| | | |||| | || || ||||| || |||||||||||||| Sbjct 557 TCGAGCAGCATTTCGCGGTTCATGACGTTCACGTTCAGGTGCTGACCACCTTC 505 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 555167247036920