Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acytostelium_20leptosomum_20[genbank_20GCA_5F900092245.1_202017-01- 02] 28,227 sequences; 57,256,845 total letters Query= NC_005179.1 Length=134721 Score E Sequences producing significant alignments: (Bits) Value seq19 150 2e-31 >seq19 Length=770976 Score = 150 bits (166), Expect = 2e-31 Identities = 478/734 (65%), Gaps = 14/734 (2%) Strand=Plus/Minus Query 12858 TTTTTTGATATTCGCTAACTCTTTTTTCAAAAAAGTTTGTTTTTCCTTCTAACGAAATAT 12917 |||||||||| || | || | ||| ||||| || || ||||| |||| | || || Sbjct 360853 TTTTTTGATAATCACCCACACGTTTCTCAAAGAAATTGGTTTTGCCTTGCAGGGAGATCA 360794 Query 12918 TTTCCATAAAATCGAAAGGATTTTTCGAACAATAGTATTTTT-TACACCCTAATTCTAGT 12976 | ||||||||||| || ||||| | | | ||| |||||| || | || | ||| | Sbjct 360793 TCTCCATAAAATCAAACGGATTGGTGGCATGATA-TATTTTGGTATAACCCAGTTCCTGC 360735 Query 12977 AACAATCTGTCAGCAACAAACTCTATGTACTGTTTCATTAAATCACAGTTCATTCCTATT 13036 | | ||||||| ||||||||||| || |||||| ||| | | ||||| || || Sbjct 360734 AGCCATCTGTCTGCAACAAACTCAATATACTGTGACATCAGTTTTGCATTCATCCCGATC 360675 Query 13037 AATTTTACAGGCATAGCTTCTGTTAAAAAGtttttttCTATATCAACTGCTTCGATAACT 13096 | || |||| || ||||| | ||| | ||||| || || || || ||| | Sbjct 360674 AGGGCAACCGGCAAGGCATCTGTAATAAATTCCTTTTCGATTTCTACCGCGTCGCGGATA 360615 Query 13097 ATGTCTCTTATTACGTTCT--CTAATGGAGGATTTGATAGATGCTTAAACATCATACATG 13154 || | | || | || || | | |||| || ||| | | || || | Sbjct 360614 ATTCCATGAACGACTTCCTGGCTCA--GTTTATTTTTGAGCATTTTATAAAGCAGGCAGG 360557 Query 13155 CAAAATCACAGTGCAATCCTTCATCTCTACTTATTAGCTCGTTTGAAAATGTTAGACCCG 13214 |||| ||||| |||| || |||||||| || | ||| || ||| ||||| || | Sbjct 360556 CAAATTCACAATGCATCCCCTCATCTCTGGAAATCAACTCATTACTAAAGGTTAGCCCTG 360497 Query 13215 GCATAAGCCCTCGTTTTTTAATCCAAAATATAGCAGCAAACGAACCCGaaaaa-aaTATT 13273 |||| || |||| |||||| | ||| || || | | || | | |||| || || || Sbjct 360496 GCATCAGGCCTCTTTTTTTCAACCAGAAGATCGAA-CAGAAGCTCCCGCTGAAGAAAATG 360438 Query 13274 CCTTCAACTGCTGCAAACGCTATCAACCTTTCACCATACGTACTATTTTTACTCTCTATC 13333 ||||| ||||| || || || | ||| | ||| || | |||| | ||| ||| Sbjct 360437 CCTTCCACTGCGGCGAAAGCCACCAAACGTTCGGCAAA------ATTTCCGCCCTCAATC 360384 Query 13334 CACTTTCTGGCCCAGTTTGCTTTTTGTTTAACGCAGTTCATATTTTCTATTGCGTTAAAT 13393 || ||||| | |||||||| || || || | | |||| || | || Sbjct 360383 CAGCGCAATGCCCATTCTGCTTTTTTCTTTACACAAGGAACCGTCTCTACGGCATGGAAC 360324 Query 13394 AAATAAtttttttCCTTACTGTCTAAAATATAAGTATCTATCAATAAGCTATACATTTCT 13453 | | |||||| | | ||| |||||| ||||| |||| | ||| |||| Sbjct 360323 AGCCTGTCTTTTTCTTCAGGATCTTTAATATAGGTATCGATCAGCAGCGCATAGGTTTCA 360264 Query 13454 GAATGAATATTTTCCATCGCTATTTGGAAACCATAAAAACATCTAGCCTCTGATACCTGA 13513 || || || ||||||||| || ||||| ||||||||||| | || || | | ||| Sbjct 360263 GAGTGGATGTTTTCCATCATGATCTGGAAGCCATAAAAACAACGGGCTTCGGGAAGCTGT 360204 Query 13514 ACTTCGGAGTAAAATCTTTCTGCTAAGTTTTCGTTAACTATCCCGTCACTAGCAGCaaaa 13573 |||||| || | |||| | |||||| || || || |||||||| ||||||||| Sbjct 360203 ACTTCGCTCATGAAGTTCACTGCAAGGTTTTCATTTACAATGCCGTCACTTGCAGCAAAA 360144 Query 13574 aaaGCAAGTATGTG 13587 ||||||||||| || Sbjct 360143 AAAGCAAGTATATG 360130 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 430834134916254