Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acytostelium_20leptosomum_20[genbank_20GCA_5F900092245.1_202017-01- 02] 28,227 sequences; 57,256,845 total letters Query= NC_005262.3 Length=63882 Score E Sequences producing significant alignments: (Bits) Value seq360 91.5 6e-14 >seq360 Length=29890 Score = 91.5 bits (100), Expect = 6e-14 Identities = 196/292 (67%), Gaps = 6/292 (2%) Strand=Plus/Minus Query 10147 GCGTAAACAAGGTAATTTTGGTTGGAAACTTAGGGGCCGATCCTGAAGTCCGTTACCTGC 10206 ||||||||||||| ||| | || || || | ||| || || ||||| || ||| ||| Sbjct 27570 GCGTAAACAAGGTGATTCTCGTCGGTAATCTGGGGCAGGACCCGGAAGTACGCTACATGC 27511 Query 10207 CGAGCGGCGACGCGGTTGCGAACATCCGTCTCGCGACGACCGATCGATACAAG---GACA 10263 | || |||| ||| || || ||| || || || || |||| || | | |||| Sbjct 27510 CAAGTGGCGGCGCTGTCGCCAACTTCACGCTGGCAACTTCCGA---ATCCTGGCGTGACA 27454 Query 10264 AGGCGAGCGGCGACATCAAGGAGGCGACTGAATGGCACCGCGTCTCGTTCTTCGGTCGGC 10323 || || |||||| || || ||| ||| || ||||||||||| | | ||||| | Sbjct 27453 AGCAGACCGGCGAAATGAAAGAGCAGACCGAGTGGCACCGCGTTGTGCTGTTCGGCAAAC 27394 Query 10324 TGGCTGAGATCGTCGACGAGCACCTGCGCAAGGGCGCATCTGTCTACATCGAGGGGCGCA 10383 |||| || ||| | ||| | ||||| || ||| | || ||||| || || | Sbjct 27393 TGGCGGAAGTCGCTGGTGAGTATCTGCGTAAAGGCTCTCAGGTGTACATTGAAGGCCAGC 27334 Query 10384 TCAAGACGCGGAAGTGGCAGGATCAATCCGGCCAGGATCGTTACACGACCGA 10435 | || || |||||| ||||||||||| ||||| ||||| ||||| Sbjct 27333 TGCGTACCCGCAAGTGGACCGATCAATCCGGTCAGGACAAATACACCACCGA 27282 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 204227318241921