Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acytostelium_20leptosomum_20[genbank_20GCA_5F900092245.1_202017-01- 02] 28,227 sequences; 57,256,845 total letters Query= NC_005340.1 Length=30636 Score E Sequences producing significant alignments: (Bits) Value seq2322 141 2e-29 >seq2322 Length=24874 Score = 141 bits (156), Expect = 2e-29 Identities = 198/276 (72%), Gaps = 4/276 (1%) Strand=Plus/Plus Query 22028 TCAGTAAGCAAAAGCAtttttttGAACTCCTGATAGCAAGGCTTAAACATTCGCCCCTGT 22087 |||| || ||||| | || || ||| ||| ||| |||||||||||||||| | | ||| Sbjct 9913 TCAGCAAACAAAAACGTTCTT--GAATTCCCGATGTCAAGGCTTAAACATTCACTCTTGT 9970 Query 22088 CGTGTGGATAATTTTTCGTAAAGCCATTTTGTGATAGGGACTGTACGAttttttttACCT 22147 | || ||| |||||||||||||| ||||| || | || ||||||| || | Sbjct 9971 CTCGTAGATGATTTTTCGTAAAGCTATTTTTGAATCAAAATGGTGCGATTTTGTTGAG-- 10028 Query 22148 TTCGTTTTTGTGAAAGTCAGTTTGTAGGGTGAAAGCTGTGGACGAGTTAATCGTTCTGCC 22207 ||| ||||| ||||| |||||| ||| | | || || || || |||||| ||| | | Sbjct 10029 TTCATTTTTTTGAAAACCAGTTTTTAGAGCGGAAATTGAGGCCGGATTAATCTTTCGGTC 10088 Query 22208 TCACTCCATCTGGCGCCGGTAGCTAAACAGATCTCAACAATCTGCGTAAGGTCTTCGTGT 22267 || | ||| | | || ||||| ||||| | || |||| ||| |||||||| ||| Sbjct 10089 TCGCCCCAGCAAACACCTGTAGCCAAACAATTTTCGGTAATCCGCGAGAGGTCTTCTTGT 10148 Query 22268 CCATACTGATGACATGCCAATAAAAGTTGCGGTATT 22303 |||||||| |||||| || ||| |||| | | ||| Sbjct 10149 CCATACTGGTGACATATCAGTAACAGTTACTGGATT 10184 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 97880779789652