Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acytostelium_20leptosomum_20[genbank_20GCA_5F900092245.1_202017-01- 02] 28,227 sequences; 57,256,845 total letters Query= NC_005357.1 Length=42493 Score E Sequences producing significant alignments: (Bits) Value seq4 324 4e-84 >seq4 Length=38681 Score = 324 bits (358), Expect = 4e-84 Identities = 467/656 (71%), Gaps = 2/656 (0%) Strand=Plus/Plus Query 18968 AGTTCGGACACGTCCACATTGGCGATGCGGACGACGTAACGCCAGTCGCGCAGGGTCAGG 19027 || ||| ||| || | ||||||||||| || ||||| |||||||| ||||| | ||| Sbjct 24028 AGATCGCTCACATCGATGTTGGCGATGCGCACAACGTAGCGCCAGTCACGCAGTGCCAGA 24087 Query 19028 CCGATGTCCCACTTGTAGTGGGTGCGGTAGCCCTGGTAGCGGCCGCCGGCGGCGTCGATC 19087 ||| | ||||| ||||| ||||| || ||||||||||| || || ||| |||| | Sbjct 24088 CCGTTATCCCATTTGTAATGGGTACGATAGCCCTGGTATTTACCACCACTGGCATCGACC 24147 Query 19088 AGCGTGTCCTCGCCGAGGTCACGCGATTGCAGGCCGGCCTGCGAACCCTTCGGGTAGATG 19147 || || | ||| || |||| | | || ||||| || | | || |||||| ||||| Sbjct 24148 AGGGTTTGCTCACCAAGGTTCTGAGTCTGTAGGCCAGCTTTCTGCCCTTTCGGGAAGATG 24207 Query 19148 GTATGCAGGGTGTTCGGCCCCCACACCGTCAGCCAGATGGATGCGTTGTCGCTGCCCGTG 19207 ||| | |||||| ||||| ||| ||||||||| || | ||| || |||| || Sbjct 24208 CCATGAACGGTGTTTTCACCCCATACCACCAGCCAGATAGAGGTGTTATCAGTGCCGGTA 24267 Query 19208 CCGCCGGCGTCGATGATGTTCTGGCCGTTCTCCGCGGACAGGCTGTTGAAGCGCGGCGTC 19267 ||||| |||||||| |||||||||||||| | || ||| |||| | | || | | | Sbjct 24268 CCGCCAGCGTCGATAATGTTCTGGCCGTTACCTGCAGACTTGCTGGAGTAACGGGATGAC 24327 Query 19268 AGGCCCATGAACTTCTCGGCGTCGATGCTGGAATCGCCGTAGAACAGCGTGGTCGCCTGG 19327 ||||||||||| | || | || | |||| |||||||||||||||||| ||| Sbjct 24328 AGGCCCATGAATTGCTGTGGGTTCACACTGGTATCGCCGTAGAACAGCGTCTGAGCCATC 24387 Query 19328 GTCTGGTTCATGCCTTCGATGAAGGCGCGGTCTTCGGACAGGCGCCAGGCGGCGGAATTG 19387 ||||||||| ||||||||||| || |||||||| ||||| || | | || | |||| Sbjct 24388 TGCTGGTTCATACCTTCGATGAATGCACGGTCTTCCGACAGACGGAATTCAGCAGTATTG 24447 Query 19388 CCGTTGAGGTCGGCCAGGGCCTTGTCCACTTCGGCGTAGGTTTCCAGCATCCCCATGCTG 19447 ||||| || || ||||| | ||| || || || || ||||||||||||||||| | | Sbjct 24448 CCGTTCAGATCAGCCAGAGACTTATCAACCTCAGCATAGGTTTCCAGCATCCCGCAGGAG 24507 Query 19448 TCCTTGACCTGCACGGTGCGGGACTTCTCGGGCTGCACGCCATAGTTCAGCTTGCGCCAG 19507 || | ||||| |||||| || || |||||||| || ||||||||| |||||| Sbjct 24508 TCTGTAACCTGTACGGTGGTTGATTTGCTTGGCTGCACACCGTAGTTCAGCAAGCGCCAT 24567 Query 19508 GTGCCGGTGGGCAGGCCGCTGCGAACCGTGGTCTTGTGCTCGGTGAAACCGTTGGCCTCG 19567 || | | |||| || || || ||||| |||| | || |||| |||| Sbjct 24568 GTCGCAGATGGCAAACCAGATCGCACAGTGGTGCGGTGCCCTGTTGGCAGGTTGCCCTCT 24627 Query 19568 ATGACGGTCATGT-CGTCGAGGATTTCGTTGGTTTCGTTCAGCATTTCGACGATCT 19622 | || |||||| |||| ||||||||||| || | | || | |||||| |||| Sbjct 24628 ACGAACATCATGTCCGTC-AGGATTTCGTTTGTCTGGGAAAGGAGTTCGACAATCT 24682 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 135810461663170