Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acytostelium_20leptosomum_20[genbank_20GCA_5F900092245.1_202017-01- 02] 28,227 sequences; 57,256,845 total letters Query= NC_005859.1 Length=121750 Score E Sequences producing significant alignments: (Bits) Value seq2261 104 2e-17 >seq2261 Length=3986 Score = 104 bits (114), Expect = 2e-17 Identities = 135/187 (72%), Gaps = 0/187 (0%) Strand=Plus/Minus Query 27655 ATTACATCGCCTGAGTAAATGTACGACTAATAACGTCGTTCTGCTGTTCACGCGTCAGTG 27714 ||||||| | |||||| || ||||| ||||||| || | ||||||||| ||||| | Sbjct 688 ATTACATGGTCTGAGTGAAGGTACGGGTAATAACATCCTGCTGCTGTTCTTTGGTCAGGG 629 Query 27715 CGTTAAAACGCACAGCGTACCCTGAAACACGGATAGTTAATTGAGGGTATTTTTCAGGAT 27774 ||||||||| || ||||| || || |||||||| || | || || |||||||| || | Sbjct 628 AGTTAAAACGTACGGCGTAGCCAGATACACGGATGGTCAGCTGCGGATATTTTTCCGGGT 569 Query 27775 GTTTCTGTGCATCCAAAAGCTGATCACGACTTAACACATTGACATTTAGGTGTTGACCAC 27834 || | || || | ||| || || | | || || || || ||||| ||||||| Sbjct 568 TTTCCATCGCGTCGAGCAGCATTTCGCGGTTCATGACGTTCACGTTCAGGTGCTGACCAC 509 Query 27835 CTTCAAT 27841 |||| || Sbjct 508 CTTCGAT 502 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 389341214080517