Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acytostelium_20leptosomum_20[genbank_20GCA_5F900092245.1_202017-01- 02] 28,227 sequences; 57,256,845 total letters Query= NC_006883.2 Length=252401 Score E Sequences producing significant alignments: (Bits) Value seq48 149 1e-30 >seq48 Length=607718 Score = 149 bits (164), Expect = 1e-30 Identities = 356/529 (67%), Gaps = 12/529 (2%) Strand=Plus/Plus Query 193671 AGTCATGTTAAAGTTTCCTTTGAGATGCCAGAGTATACTTCTAATGTTGATGCTTTAGGA 193730 || |||||| | || || || ||||| || ||||| | |||| |||| | | || Sbjct 248826 AGCCATGTTCATGTGAGTTTCGAAATGCCGGAATATACGGCGAATGCGGATGGTATCGGG 248885 Query 193731 ACTCTTAGAATACTTGAAGCAGTTCGTATGTTGGGAATGGAGAAAGATGTTCGCATCTAT 193790 || | || | || ||||| | || || ||||| ||||||||| | | || ||| Sbjct 248886 ACATTAAGGCTCCTGGAAGCCATACGGATTTTGGGTATGGAGAAAAAAACCAGAATATAT 248945 Query 193791 CAGGCATCTACCAGCGAACTGTATGGTGGTGTTCTAGGCACT-CCACTATCAGAAACCAC 193849 ||||| ||||| ||| |||||||| || | |||| | || | | ||||| || Sbjct 248946 CAGGCCTCTACTTCTGAATTGTATGGTTTGGTGC-AGGCGGTTCCCCAAAGTGAAACGAC 249004 Query 193850 ACCATTTCATCCACGCTCTCCTTATGGTGTAGCAAAGTTGTATGGTTATTGGATCATCAA 193909 || ||| |||| | |||||||||| || || || |||||| || ||||| | Sbjct 249005 GCCGTTTTATCCCAGGTCTCCTTATGCAGTGGCCAAAATGTATGCCTACTGGATTACGGT 249064 Query 193910 GAATTATCGTGAGTCATATGGATTCCACGCTAGTTCTGGTATTCTCTTCAATCACGAATC 193969 ||||||||||| | ||| | ||||| || ||| ||| | |||||||| ||| Sbjct 249065 AAATTATCGTGAAGCTTATAACATGTACGCTTGTAATGGGATTTTATTCAATCATGAAAG 249124 Query 193970 TCCAAGAAGAGGTGAGACATTTGTAACTCGTAAGATTACACAAGGTTTATCTAAGATCTC 194029 || |||||| || || ||||| || || || ||||| | | | | || || | Sbjct 249125 CCCTTTAAGAGGAGAAACTTTTGTGACCCGAAAAATTACCCGTGCAGCAGCGAAAATTGC 249184 Query 194030 TGTTGGATTACAGAAGATTCTTTATCTT--GGTAATCTTA-ATGCTAAGAGGGATTGGGG 194086 | ||| | |||| ||| ||||| || ||||| |||| || || | || ||||| Sbjct 249185 CTTGGGACTTCAGA--ATTGTTTATATTTAGGTAA-CTTATCAGCGCAGCGTGACTGGGG 249241 Query 194087 ACACGCAAAGGATTATGTTGAAGCGATGTGGTTAATGTTGCAACAGGATGAACCCGATGA 194146 ||| || || |||||| | ||||| |||||||| || | || ||||| || | || || Sbjct 249242 ACATGCTAAAGATTATATCGAAGCCATGTGGTTGATCCTTCAGCAGGAAAAAGCAGAAGA 249301 Query 194147 TTATGTGATTGCTACAGG--TGAACAGTATTCTGTTAGAGACTTTGTGA 194193 | ||||||||| ||||| | | || || |||| | || ||||||| Sbjct 249302 CTTTGTGATTGCAACAGGGATTACCACTA--CTGTCCGTGATTTTGTGA 249348 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 807270264242120