Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acytostelium_20leptosomum_20[genbank_20GCA_5F900092245.1_202017-01- 02] 28,227 sequences; 57,256,845 total letters Query= NC_006998.1 Length=194711 Score E Sequences producing significant alignments: (Bits) Value seq19 268 1e-66 seq3533 208 9e-49 seq1043 179 5e-40 >seq19 Length=770976 Score = 268 bits (296), Expect = 1e-66 Identities = 1027/1591 (65%), Gaps = 40/1591 (3%) Strand=Plus/Minus Query 62628 GCACCGTAATAAATGGTTTCGAAGATCTTCTTATTTAGATCTTGTGCTTCCAGGCTATCA 62687 ||| || ||||||| ||||| || || | ||||||| | || ||| | || ||| Sbjct 362637 GCAGCGAAATAAATCGTTTCAAAAATTTCTTTATTTAAAATTTTTGCCCCTTCACTTTCA 362578 Query 62688 AATGGATAATTTAAGAGAATAAACGCGTCCGCTAATCCTTGAACACCAATACCGATAGGT 62747 ||||| || | || ||||| || || || ||||| || ||||| | ||| | ||| Sbjct 362577 AATGGTAAACGCATCAGGATAAAAGCATCTGCCAATCCCTGTACACCTAAACCAACTGGT 362518 Query 62748 CTATGTCTCTTATTAGAGATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATT 62807 || || | | | || || ||| |||||| | |||||||||||| ||| |||||| Sbjct 362517 CTGTGGCGCATGTTGGAATTTTTAGCTTCCTCTACCGGATAATAATTATGATCAATAATT 362458 Query 62808 TTATTGAGATTTCTGACAATTACTTTGACCACATCCTTCAGTTTGAGAAAATCAAATCGC 62867 ||||| || || | | | | ||||| | | ||| || |||||| Sbjct 362457 TTATTCAGGTTCAGGGTAGCCTGATAGGTTACATCATATAATTTCTGATGATCAAACTCT 362398 Query 62868 CCATCTATTACAAA-CATGTTCAAGGCAACAGATGCCAGATTACAAACGGCTACCTCAT- 62925 || | || ||||| | || ||| |||| || ||||| ||||| || || ||||| | Sbjct 362397 CCGTTGATGACAAATCTTGGCAAAGCCAAC-GAGGCCAGGTTACATACAGCAACCTCGTC 362339 Query 62926 -TAGCATCCGCATATTGTATTATCTCAGTGCAAAGATTACTACACTTGATAGTTCCTAAA 62984 | | | | ||| | ||| || || || ||||| || || ||||| ||||||||| Sbjct 362338 TTTGGAA--GTATACTCTATAATTTCTGTACAAAGGTTGGAACTTTTGATGGTTCCTAAA 362281 Query 62985 TTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTACCAGTT 63044 ||||| || || || |||| ||||| ||||| | | | || || || ||| Sbjct 362280 TTTTGCTGGTTGGATTTGCTGTTTGCTGCATCTTTATACAACAGATAAGGGGTTCCGGTT 362221 Query 63045 TCAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATAGATTT---- 63100 |||||||| || || | ||| || ||| | || | || |||| || | ||| Sbjct 362220 TCAATCTGTGAATCCAGAATGGCAAACCAAAGCTCTTGTGC-TTTA--ATGGTTTTACGG 362164 Query 63101 GTATCTCCTTTCTCTTTCGTATAGTGTATACAATCGTTCGAACTCGTCTCCCCAAACATT 63160 | | ||||| || ||||||| | ||| || ||||| || | || || || | Sbjct 362163 GCACGTCCTT-CTTTTTCGTAACGCTCATATAAAGCATCGAATTCTGCACCA-AAGCAAT 362106 Query 63161 GT-CCAATCCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTC 63219 | ||| ||| || ||||| ||||| | || ||| ||||||| || | || | Sbjct 362105 CTGCCAGTCCCGGGGCTTCATGAGGACAGAATAAACTCCAGTCTCCGTTTTCTTCTACCC 362046 Query 63220 GTTTCATAAAGAGATCAGGAATCCAAAGAGCTATA-AATAGATCTCTGGTTCTATGTTCC 63278 | |||| || || ||| | |||||| || ||| |||| |||||||| | | |||| Sbjct 362045 TTCTCATGAACAGGTCACATACCCAAAGGGC-ATAGAATAAATCTCTGGCACGAAGTTCT 361987 Query 63279 TCGTTTCCTGTATTCTTTTTA---AGATCGAGGAACGCCATAATATCAGAATGCCACGGT 63335 || || || || |||||| || || || || || | ||| | |||||| || Sbjct 361986 TCTTTACC---ATGGTTTTTACGCAGGTCCAGAAAACTCAGCACATCTGCATGCCATGGC 361930 Query 63336 TCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCG 63395 |||| ||| ||||| | | | || ||||| ||| ||||| || | || | ||| Sbjct 361929 TCCAGGTAAATGGCAAAAGCACCTTTACGTTTACCTCCACCCTGGTCCACATAACGGGCG 361870 Query 63396 GTGTTATTATAAACTCTCAACATTGGAATAATACCGTTTGATATACCATTGGTACCGGAG 63455 || | ||| | ||| ||||||| || | ||| || || | || || || || Sbjct 361869 GTATCGTTAAATACTTTCAACATAGGTACAATCCCATTGCTGGTCCCGTTTGTTCCACCA 361810 Query 63456 ATATAGCTTCCACTGGCACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTA 63515 ||||| ||| ||||||| || ||| || || ||| || || ||||| ||| Sbjct 361809 ATATAAGATCCCGTGGCACGGATGTTATGGATGCTTAAACCAATACCACCTGCGCTTTGT 361750 Query 63516 GAGATTAATGCGCATCGTTTTAACGTGTCATAGATACCCTCTATGCTATCATCGATCATG 63575 || ||| ||| | ||||||| || || || || || || || || || || |||| Sbjct 361749 GAAATTTTAGCGGTTTGTTTTAAAGTATCGTAAATTCCTTCAATACTGTCGTCCTGCATG 361690 Query 63576 TTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGA 63635 | |||| ||| ||| ||||||||| | | || | ||||||||||| || || Sbjct 361689 GTCAGTAAAAAGCAGGAAGACATTTGAGGTTTAGGGGTAGCTGCATTAAATAAAGTTGGG 361630 Query 63636 GAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTATA 63695 | || ||||||||||| ||| | || || ||||| |||| || || ||| Sbjct 361629 GTTGCATGCGTAAACCAGCGCTCACTCATCAGGTTATACGTTGCAATCGCACTTTCAATA 361570 Query 63696 TCCCATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATC 63755 || || ||||| ||||| || |||||||| |||| || || || | ||| || || Sbjct 361569 TCTTCTTTGTGAATCCCTACGGCAACACGCATAAACAAATGTTGCGGGCGTTCTACAAT- 361511 Query 63756 TTGTTGTT-TATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA 63814 |||| || |||||||| || ||||||||||| | |||||||| |||||||| | | | Sbjct 361510 TTGTCCTTCTATTTTCAGCAGATAGGATTTTTCAAGGGTTTTAAACCCAAAATAATCGAA 361451 Query 63815 TGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAGTTTAT---CCTTATATTTGTTAAC 63871 | ||| || | || |||||||| || || | | | || | |||| | || Sbjct 361450 TCCAAAATCCCTGTCATAAATAATGGTGCTGTCCAGAATCTCTGCATTTTCTTTGATCAC 361391 Query 63872 --TATATCCATGGTGATACTTGAAATAATCGGAGAATGTTTCCCATTTTTAGGATTAACA 63929 | ||| || || ||| | | || | ||| | |||| | || ||| Sbjct 361390 CTCCCAAACATCGT-----CTGCAATCAGTGAAGCAGATTTGTCTGTTTTGGAATCCACA 361336 Query 63930 TAGTTGAATAAATC--CTCCATCACTTCACTAAATAGtttttttGTTTCCTTGTGTAGAT 63987 ||||| ||| | | |||||| || || ||| | || | |||||| |||| Sbjct 361335 TAGTT--ATACAGCATCTCCATGGTTTTGGAGAAAGATTTCGTGGTGTTCTTGTGCAGAT 361278 Query 63988 TTGATACGGCTATTCTGGCGGCTAGAATGGCATAATCCGGATGTTGTGTAGTACAAGTGG 64047 | ||||| || || | || || | | |||||||| ||||| | || || | | Sbjct 361277 TAGATACCGCAATACGGGAAGCCAATAATGCATAATCAGGATGCTTGGTGGTCAGCGAAG 361218 Query 64048 CTGCTATTTCGGCTGCCAGAGTGTCCAATTCTACCGTTGTTACTCCATTATATATTCCTT 64107 |||| |||| || ||||| | |||| |||| || ||||| |||| || | |||| Sbjct 361217 CTGCCGTTTCCGCAGCCAGGTTATCCAGTTCTGAGGTGGTTACCCCATCGTACAAACCTT 361158 Query 64108 GAATAACCTTCATAGCTATTTTAATAGGATCTATATGATCCGTGTTTAAGCCATAACATA 64167 ||| ||||| | || | | ||| ||||| | | || | || |||||||| || | Sbjct 361157 CAATTACCTTTTTCGCCACATCAATCGGATCCACCAGTTCTGCATTAAAGCCATAGCAGA 361098 Query 64168 ATTTTCTAATACGAGACGTGATTTTATCAAA 64198 ||| |||||| | || |||||||| || Sbjct 361097 GCTTTTCAATACGGGCGGTTATTTTATCGAA 361067 Score = 237 bits (262), Expect = 2e-57 Identities = 583/877 (66%), Gaps = 9/877 (1%) Strand=Plus/Minus Query 33011 TTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTCCAATGATATAT 33070 ||||||| || |||||||||||||| || || ||||| ||||| |||| || || || Sbjct 360853 TTTTTTGATAATCACCCACACGTTTCTCAAAGAAATTGGTTTTGCCTTGCAGGGAGATCA 360794 Query 33071 TTTCCATGAAATCAAACGGATTGGTAACATTATAAAtttttttAAATCCCAATTCAGAAA 33130 | ||||| ||||||||||||||||| ||| ||| ||||| || | |||| ||| | Sbjct 360793 TCTCCATAAAATCAAACGGATTGGTGGCATGATATATTTTGGTATAACCCAGTTCCTGCA 360734 Query 33131 TCAATCTATCCGCGACGAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATAA 33190 | |||| || || || || || ||||| | ||||| || |||||| || || | Sbjct 360733 GCCATCTGTCTGCAACAAACTCAATATACTGTGACATCAGTTTTGCATTCATCCCGATCA 360674 Query 33191 GTTTAACTGGAAGAGCCGCAGTAAGAAATTCTTGTTCAATGGATACCGCATCTGTTATAA 33250 | ||| || | || | |||| |||||| | ||| || |||||| || |||| Sbjct 360673 GGGCAACCGGCAAGGCATCTGTAATAAATTCCTTTTCGATTTCTACCGCGTCGCGGATAA 360614 Query 33251 TAGATCTAACGGTTTCTTCACTCGGTGGATGCAATAAATGTTTAAACATCAAACATGCGA 33310 | |||| ||| | ||| || || | |||| | | || || || | Sbjct 360613 TTCCATGAACGACTTCCTGGCTCAGTTTATTTTTGAGCATTTTATAAAGCAGGCAGGCAA 360554 Query 33311 AATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGCA 33370 | || || |||| ||||| ||||| ||| | || || ||| || || || |||| Sbjct 360553 ATTCACAATGCATCCCCTCATCTCTGGAAATCAACTCATTACTAAAGGTTAGCCCTGGCA 360494 Query 33371 TTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCAGAA-AAGAAGATTCCT 33429 | ||||| | ||||| | ||| || || ||| ||| | ||| | ||||| || ||| Sbjct 360493 TCAGGCCTCTTTTTTTCAACCAGAAGATCGAACAGAA-GCTCCCGCTGAAGAAAATGCCT 360435 Query 33430 TCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATAACCGGCGCTGTCATGTATCCACTTT 33489 || ||||| || || || | | | || || || ||| ||| ||||| Sbjct 360434 TCCACTGCGGCGAAAGCCACCAAACGTTCGGCAAAATTTCCGCCCTCA---ATCCAGCGC 360378 Query 33490 TGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAGAGATAG 33549 ||||| || || || || ||||||||||| | ||| |||| ||||| || || | Sbjct 360377 AATGCCCATTCTGCTTTTTTCTTTACACAAGGAACCGTCTCTACGGCATGGAACAGCCTG 360318 Query 33550 tttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACATTTCCGAATGA 33609 | |||||| | | |||||||| ||| |||||||||| || ||| |||| || || Sbjct 360317 TCTTTTTCTTCAGGATCTTTAATATAGGTATCGATCAGCAGCGCATAGGTTTCAGAGTGG 360258 Query 33610 ATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGTACTTCT 33669 |||||||| || ||||| || || || ||||| | || |||| || ||||||||| Sbjct 360257 ATGTTTTCCATCATGATCTGGAAGCCATAAAAACAACGGGCTTCGGGAAGCTGTACTTC- 360199 Query 33670 GTACAAAATCGTT--CCGCCAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACG 33727 | || | ||| | || | |||||||| || || |||||||| || |||||||| | Sbjct 360198 GCTCATGA-AGTTCACTGCAAGGTTTTCATTTACAATGCCGTCACTTGCAGCAAAAAAAG 360140 Query 33728 CCAATACATGTTTTATAAAATATTTTTCGTCTGGTGTTAGTTTATTCCAATCATTGATAT 33787 | | || ||| || |||| ||| ||| ||| || | ||| | || | Sbjct 360139 CAAGTATATGAGAAATGAAATGACGCTCGCCTGTATTTAAGTTGTCCCAGTGCTTCTGGT 360080 Query 33788 CTTTAGATATATCTACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATGT 33847 | | ||| | || | |||||| | ||||| || ||| || ||| |||||||| | Sbjct 360079 CATCAGAAAGGTCAATTTCTTCAGCGGTCCAGAAACTTGCTTCACTCTTCTTATACATTT 360020 Query 33848 TCCAGATGTCATAATATTGGATTGGGAAAATAACAAA 33884 |||||| ||| |||| || || |||| |||||| Sbjct 360019 CCCAGATTTCAGGGTATTTAATAGGCAAAAGAACAAA 359983 >seq3533 Length=1137 Score = 208 bits (230), Expect = 9e-49 Identities = 419/608 (69%), Gaps = 15/608 (2%) Strand=Plus/Minus Query 33291 TTTAAACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTT 33350 |||| ||| || || || || |||||||| ||||||||||| | ||| || || ||||| Sbjct 967 TTTATACAGCATGCAAGCAAAGTCGCAGTGTAGACCCTCGTCACGACTGATCAGCTCGTT 908 Query 33351 GGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGA 33410 |||||| || || || ||||||| || | || || | ||| | |||| | | || | Sbjct 907 GGAAAAGGTAAGGCCTGGCATTAAACCCCTTTTCTTCAACCAGTAGATGGCA-CAAAAGC 849 Query 33411 TCCAGAA-AAGAAGATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCC--AT-AAC 33466 | | | |||||||| || || || |||||||| || | | | || | || ||| Sbjct 848 TGCCGCTGAAGAAGATACCCTCAACCGCAGCAAATGCCACCAAACGTTCGGCGAATGAAC 789 Query 33467 CGGCGCTGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCG 33526 | | || || ||||| | ||||| || |||||||| ||||| || |||| Sbjct 788 AAGAGTTGG--TG-ATCCAGCGCAGCGCCCACTCTGCCTTCTTCTTTACGGCGGGGATCG 732 Query 33527 TTTCTATGGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCA 33586 | ||||| || || || || | | ||| | | ||| |||||| || || ||||||| Sbjct 731 TCTCTATCGCGTTGAAAAGCTCCTGTTTCTTTGTGCTACTTTTAACGTATGTGTCGATCA 672 Query 33587 AAAGACTATACATTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATC 33646 ||||||| || | || | |||||||| ||||| || |||||||| || ||||| || | Sbjct 671 AAAGACTGTAGGTCTCTGCGTGAATGTTCTCAATCGCGATCTGAAAGCCATAGAAGCAGC 612 Query 33647 TAGCCTCGGTAATCTGTACTTCTGTACA-AAATCGTTCCGCCAAATTTTCATTCACTATT 33705 ||||| | || ||||| || | ||| ||||| || | ||| ||||| || || Sbjct 611 GGGCCTCTGGTATTTGTACCTCAG-ACATGAATCGAGTGGCGAGATTCTCATTGACGATA 553 Query 33706 CCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCTGGTGTT 33765 ||||| || ||||| || |||| |||| | ||||| | | ||||| || || Sbjct 552 CCGTCTGATGCGGCAAAGAATGCCAGCACATTGGTGATAAAGTGTCGTTCGT-TGTCATT 494 Query 33766 -AGTTTATT---CCAATCATTGATATCTTTAGATATATCTACTTCTTCCACTGTCCAAAA 33821 || || || |||||| || ||||| || | |||| ||| || ||||||| || Sbjct 493 GAGCTTGTTCTCCCAATCGTTCATATCAGAAGCCAAGTCTAATTCCTCTGCTGTCCAGAA 434 Query 33822 TGATGCCTCTGCCTTTTTATACATGTTCCAGATGTCATAATATTGGATTGGGAAAATAAC 33881 ||| || ||||| || || ||||| | ||| ||||| || || ||| ||||| | ||| Sbjct 433 TGAAGCTTCTGCTTTCTTGTACATATCCCATATGTCTGTATGTTTGATAGGGAAGAGAAC 374 Query 33882 AAATCTAT 33889 ||||||| Sbjct 373 GAATCTAT 366 >seq1043 Length=1979 Score = 179 bits (198), Expect = 5e-40 Identities = 388/570 (68%), Gaps = 13/570 (2%) Strand=Plus/Plus Query 33296 ACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAA 33355 ||| |||||| || || |||||||||| ||||||||| | ||| || || ||||| || | Sbjct 208 ACAGCAAACAGGCAAAGTCGCAGTGCAAACCCTCGTCACGACTGATCAGCTCGTTCGAGA 267 Query 33356 ACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCAG 33415 ||| | ||| |||||| || ||||| || |||||||| || || ||| ||| Sbjct 268 ACGACAAGCCGTGCATTAAACCGCGCTTCTTGAGCCAAAAGATCGAGCAGAAACTGCCAC 327 Query 33416 AAAAGAAGATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCC--ATAACCG-GCGC 33472 ||||||||| || || || || |||||||| | | | ||| | || | || ||| Sbjct 328 TAAAGAAGATACCCTCGACAGCGGCAAAGGCGACCAAACGCTCGGCGAATGAGCGAGCGT 387 Query 33473 TGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTA 33532 || || ||||| ||||| ||||| ||||| || || || || || || | Sbjct 388 TGG--TG-ATCCAGCGCAAGGCCCAGTCGGCTTTCTTCTTAACGGCGGGGATAGTCTCGA 444 Query 33533 TGGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGAC 33592 |||| | ||||| ||| || | | | | || | || || ||||| | ||||| Sbjct 445 TGGCGTGGAAGAGCATGTTCTTCTTCTCGGTGTTCTTGATGTAGGTGTCGATGAGAAGAC 504 Query 33593 TATACATTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCT 33652 | || | || || || ||||| || ||||| || || ||||| |||||||| | |||| Sbjct 505 TGTAGGTCTCAGAGTGGATGTTCTCGATGGCGATTTGGAATCCATAGAAACAACGTGCCT 564 Query 33653 CGGTAATCTGTACTTCTGTACAA-AATCGTTCCGCCAAATTTTCATTCACTATTCCGTCA 33711 | | ||||| || || | ||| || ||| || | ||| || || || || ||||| Sbjct 565 CTGGGATCTGCACCTCAG-ACATGAAGCGTGTGGCAAGATTCTCGTTGACAATGCCGTCC 623 Query 33712 CTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTC-TGGTGTTAGTTT 33770 || ||||| || |||| ||| || | ||||| | |||| | || | || || Sbjct 624 GATGCGGCAAAGAAGGCCAGTACGTGAGTGATAAAGTGACGCTCGTTATCGT-TCAGCTT 682 Query 33771 ATTC---CAATCATTGATATCTTTAGATATATCTACTTCTTCCACTGTCCAAAATGATGC 33827 ||| ||||| | || || | | | ||| | ||||| ||||||| || ||||| Sbjct 683 GTTCTCCCAATCGTGAATGTCGCTTGCCAGATCGATCTCTTCGGCTGTCCAGAAAGATGC 742 Query 33828 CTCTGCCTTTTTATACATGTTCCAGATGTC 33857 ||||||||| || ||||||||||| ||||| Sbjct 743 CTCTGCCTTCTTGTACATGTTCCAAATGTC 772 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 622727400867320