Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acytostelium_20leptosomum_20[genbank_20GCA_5F900092245.1_202017-01- 02] 28,227 sequences; 57,256,845 total letters Query= NC_007022.1 Length=172963 Score E Sequences producing significant alignments: (Bits) Value seq330 105 7e-18 seq2516 102 9e-17 seq2261 91.5 2e-13 seq48 89.7 6e-13 seq272 87.8 2e-12 seq14376 86.0 7e-12 >seq330 Length=26733 Score = 105 bits (116), Expect = 7e-18 Identities = 174/249 (70%), Gaps = 4/249 (2%) Strand=Plus/Minus Query 6974 TCGCCTGGACTCAGCAACGCATGGTAAACAGCTTGGTTTGCCTGTGAACCGGAATGGGGT 7033 ||||| || ||||| ||| ||| || || ||| ||||| || ||||| || || Sbjct 8321 TCGCCCGGCTGCAGCAGCGCGGTGTAGACGGCAAAGTTAGCCTGGGAGCCGGAGTGCGGC 8262 Query 7034 TGAACGTTTGCGAAATTGCAACTAAACAGTTCTTTAGCACGCTCAATTGCCAGGTTCTCG 7093 || ||||| || | | | ||||||||||| || || || |||||||| | || Sbjct 8261 TGGACGTTAGCATAGTCAGCGCCGAACAGTTCTTTCGCGCGGTCGATTGCCAGCTGTTCA 8202 Query 7094 ATCTCATCGGCTTTTACACAACCGCCGTAATACCGTTTGCCTGGATATCCCTCAGCATAC 7153 | | | ||| | | | |||| |||||||| || || ||||| ||||| || |||||||| Sbjct 8201 ACCACGTCGACGTATTCACAGCCGCCGTAGTAACGCTTGCCCGGATACCCTTCAGCATAT 8142 Query 7154 TTGTTGGTAAAAATAGAACCTTGCGCTTTCATAACATCATCGGAC--ACATAGTTTTCGG 7211 |||||||| | ||| || ||||| | |||||| ||||| |||||||||| Sbjct 8141 TTGTTGGTCAGCTGAGAGCCCTGCGCCTGCATAAC--GCGCGGACTGGTGTAGTTTTCGG 8084 Query 7212 ATGCAATCA 7220 | || |||| Sbjct 8083 AGGCGATCA 8075 >seq2516 Length=21774 Score = 102 bits (112), Expect = 9e-17 Identities = 134/186 (72%), Gaps = 0/186 (0%) Strand=Plus/Minus Query 65588 TTAAAGGGATTGTGTGAAAGTTCGCGTGATTACGTCCCGTTGTTGCTCAGGAGTTAATGC 65647 ||| ||| || || || || || | ||||||||| || || || || || || | | Sbjct 1961 TTACAGGCTTTCGGTAAAGGTACGGGCGATTACGTCGCGCTGCTGTTCCGGCGTCAGAGA 1902 Query 65648 ATTAAAGCGTACGGCATAGCCGGAAACACGGATGGTTAGCTGGGGATATTTTTCTGGATT 65707 || |||||||| || |||||||||||||| ||||| ||||| ||||||||||| |||| Sbjct 1901 GTTGAAGCGTACCGCGTAGCCGGAAACACGAATGGTCAGCTGCGGATATTTTTCCGGATG 1842 Query 65708 AACGATTGCATCTTCCAGGGTATTTCGGTCAAGAACATTTACGTTGAGATGCTGACCACC 65767 | | || || |||||| | || || || || ||||| || |||||||| || Sbjct 1841 CTCAACCGCGTCCAGCAGGGTTTCGCGACGCAGCACGTTAACGTTCAGGTGCTGACCGCC 1782 Query 65768 TTCAAC 65773 ||| || Sbjct 1781 TTCGAC 1776 >seq2261 Length=3986 Score = 91.5 bits (100), Expect = 2e-13 Identities = 124/173 (72%), Gaps = 0/173 (0%) Strand=Plus/Minus Query 65598 TGTGTGAAAGTTCGCGTGATTACGTCCCGTTGTTGCTCAGGAGTTAATGCATTAAAGCGT 65657 || ||||| || || || || || ||| | || || || || | | ||||| ||| Sbjct 677 TGAGTGAAGGTACGGGTAATAACATCCTGCTGCTGTTCTTTGGTCAGGGAGTTAAAACGT 618 Query 65658 ACGGCATAGCCGGAAACACGGATGGTTAGCTGGGGATATTTTTCTGGATTAACGATTGCA 65717 ||||| ||||| || ||||||||||| ||||| ||||||||||| || || | || || Sbjct 617 ACGGCGTAGCCAGATACACGGATGGTCAGCTGCGGATATTTTTCCGGGTTTTCCATCGCG 558 Query 65718 TCTTCCAGGGTATTTCGGTCAAGAACATTTACGTTGAGATGCTGACCACCTTC 65770 || ||| | | |||| | || || ||||| || |||||||||||||| Sbjct 557 TCGAGCAGCATTTCGCGGTTCATGACGTTCACGTTCAGGTGCTGACCACCTTC 505 >seq48 Length=607718 Score = 89.7 bits (98), Expect = 6e-13 Identities = 154/222 (69%), Gaps = 4/222 (2%) Strand=Plus/Minus Query 7001 ACAGCTTGGTTTGCCTGTGAACCGGAATGGGGTTGAACGTTTGCGAAATTGCA--ACTAA 7058 || ||| ||| ||||||| ||| || || ||||| || || | | ||| || | Sbjct 302598 ACCGCTGCGTTAGCCTGTGCACCTGAGTGCGGTTGTACATTGACCCAG--GCAGCACCGA 302541 Query 7059 ACAGTTCTTTAGCACGCTCAATTGCCAGGTTCTCGATCTCATCGGCTTTTACACAACCGC 7118 | |||| ||| ||||||||||| || | || || || ||||| | |||| || | Sbjct 302540 ATAGTTTTTTTGCACGCTCAATCGCTAAATTTTCAATTTCATCTACAACCTCACATCCAC 302481 Query 7119 CGTAATACCGTTTGCCTGGATATCCCTCAGCATACTTGTTGGTAAAAATAGAACCTTGCG 7178 | ||||| ||||||||||| || || ||||| || ||||| |||| ||||| | Sbjct 302480 CATAATAGCGTTTGCCTGGCAGGCCTTCCGCATATTTATTGGTTAAAACTGAACCAGCAG 302421 Query 7179 CTTTCATAACATCATCGGACACATAGTTTTCGGATGCAATCA 7220 ||| |||||| | | | || ||||||| |||||||||| Sbjct 302420 CTTCCATAACCTGTTTGCTGACGAAGTTTTCAGATGCAATCA 302379 >seq272 Length=21754 Score = 87.8 bits (96), Expect = 2e-12 Identities = 125/176 (71%), Gaps = 0/176 (0%) Strand=Plus/Minus Query 65601 GTGAAAGTTCGCGTGATTACGTCCCGTTGTTGCTCAGGAGTTAATGCATTAAAGCGTACG 65660 ||||| ||||| | ||| || ||| | || ||||| | || | || |||||||| || Sbjct 8208 GTGAACGTTCGGGAGATCACATCCTGCTGCTGCTCGCGGGTCAGCGCGTTAAAGCGGACC 8149 Query 65661 GCATAGCCGGAAACACGGATGGTTAGCTGGGGATATTTTTCTGGATTAACGATTGCATCT 65720 ||||||||||| || ||||| || || | ||||| | || || | | || ||||| Sbjct 8148 GCATAGCCGGAGACGCGGATCGTCAGATTCGGATACTGCTCCGGGTGTTCTATCGCATCG 8089 Query 65721 TCCAGGGTATTTCGGTCAAGAACATTTACGTTGAGATGCTGACCACCTTCAACAGT 65776 ||| | | |||| || ||||| |||||||||||||| || || || || || Sbjct 8088 AGCAGCTTTTCCCGGTTCAGTACATTGACGTTGAGATGCTGTCCCCCCTCCACCGT 8033 >seq14376 Length=406 Score = 86.0 bits (94), Expect = 7e-12 Identities = 144/207 (70%), Gaps = 6/207 (3%) Strand=Plus/Minus Query 6985 CAGCAACGCATGGTAAACAGCTTGGTTTGCCTGTGAACCGGAATGGGGTTGAACGTTTGC 7044 ||||| || |||| || || ||| || || || |||| || || || ||||| || Sbjct 362 CAGCAGGGCCAGGTACACGGCGCTGTTGGCTTGGGAGCCGGCGTGTGGCTGGACGTTGGC 303 Query 7045 GAAATTGCAACTAAACAGTTCTTTAGCACGCTCAATTGCCAGGTTCTC---GATCTCATC 7101 | ||| | | |||||||| || || || || || ||||| | ||| ||| || | Sbjct 302 GTAATCGGCGCCGAACAGTTCCTTGGCGCGGTCGATGGCCAGTTGCTCAACGATGTCGAC 243 Query 7102 GGCTTTTACACAACCGCCGTAATACCGTTTGCCTGGATATCCCTCAGCATACTTGTTGGT 7161 | | | ||||||||||| || || ||||| ||||| || || || ||||||||||| Sbjct 242 GAACT---CGCAACCGCCGTAGTAGCGCTTGCCCGGATAGCCTTCGGCGTACTTGTTGGT 186 Query 7162 AAAAATAGAACCTTGCGCTTTCATAAC 7188 | || |||||||| || | ||| || Sbjct 185 CAGAACCGAACCTTGAGCCTCCATCAC 159 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 553158356099160