Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acytostelium_20leptosomum_20[genbank_20GCA_5F900092245.1_202017-01- 02] 28,227 sequences; 57,256,845 total letters Query= NC_007023.1 Length=180500 Score E Sequences producing significant alignments: (Bits) Value seq4092 205 1e-47 seq3869 187 3e-42 seq2516 147 3e-30 seq2100 118 1e-21 seq2053 91.5 2e-13 seq272 87.8 2e-12 seq345 86.0 7e-12 >seq4092 Length=20610 Score = 205 bits (226), Expect = 1e-47 Identities = 769/1189 (65%), Gaps = 59/1189 (5%) Strand=Plus/Minus Query 155729 CAACGAGAACGCGAACAAACACGCAAGGGTATTCCCGACACAGCGCAATTTGCTGGCGGG 155788 |||||| ||||| || || || | || ||||||| |||||| | ||||||| || Sbjct 17815 CAACGAAAACGCCAATAAGGACAGTAAAGTCATCCCGACCCAGCGCGACCTGCTGGCCGG 17756 Query 155789 TATTGTAGCGAAGCATTTCGCCCGTAATCATATCCTTCCGAAACATATCGTAGAAGCGCA 155848 ||| || || ||||| | |||||| | || | || || | || | || || || Sbjct 17755 TATCGTCGCCAAGCACTACGCCCGGCAGCACCTGCTGCCCCACGATGTGGTGATGGCCCA 17696 Query 155849 TGACTCCGGCGACATCCACTATCATGATCTGGATTAC-AGCCCGTTCACGCCATACACAA 155907 || |||| |||||||||||||| || |||||| |||| | | | || | | Sbjct 17695 CGAGCGCGGCATGATCCACTATCATGACCTCGATTACTCGCCCTTCTTCCCGATGTTC-A 17637 Query 155908 ACTGCTGTCTGGTGGATTTGAAAGGTATGCTGGCTAATGGCTTCAAGATGGGTAACGCAG 155967 ||||| ||| | ||| ||||||| |||||| | | ||||| |||||||| ||||| | Sbjct 17636 ACTGCATGCTGATCGATCTGAAAGGCATGCTGACCCAGGGCTTTAAGATGGGCAACGCGG 17577 Query 155968 ACATCGAACCCCCGAAATCAATCGGTGTTGCGACTGCTCTTATGGCACAGATCACCGCAC 156027 | ||||| || ||||| || ||| | || || || | | ||| ||||||| ||| | Sbjct 17576 AGATCGAGCCGCCGAAGTCTATCTCTACCGCCACCGCGGTGACGGCGCAGATCATCGCCC 17517 Query 156028 AGATTGCTTCTCACCAGTACGGCGGGACAACCTTTGCAAACG--TGGATAAAGTGCTGGC 156085 || | || || |||||||| || ||| | ||| || | ||| |||||||||| Sbjct 17516 AGGTCGCCAGCCATATTTACGGCGGCACCACCAT--CAACCGCATCGATGAAGTGCTGGC 17459 Query 156086 TCCGTATG-CAGAAATGACATATGAAAAGCATGTTAAGGATGCTAAAAAGTATAAAATTT 156144 |||| | ||| | | | |||||||| || || || ||| | || Sbjct 17458 GCCGTTCGTCAGCGA-AAGCTTCAAAAAGCATCGCAAAATCGCCGAAGAGTGGCAGATCC 17400 Query 156145 CGTTAGAT--CGTA-CATATGCGATGGAAAAGACTGAAAAAGATGTG-TTTGATGCTTTC 156200 || ||| || | ||||| | || |||||||| ||| | || || ||| Sbjct 17399 CG---GATGCCGAAGGCTATGCCCGCGCCCGTACCGAAAAAGA-GTGCTACGACGCCTTC 17344 Query 156201 CAATCGTATGAATACGAAGTTAACACGCTGCATACTGCCAACGGACAAACACCTTTCGTT 156260 || ||| || || || || ||||| |||||||| |||||||| || || || ||||| Sbjct 17343 CAGTCGCTGGAGTATGAGGTCAACACACTGCATACCGCCAACGGCCAGACGCCGTTCGTC 17284 Query 156261 ACTATTACTTTCGGTACTGGTAC-----GGGAATGTTTGAACGGATGATCCAGAAAGCTA 156315 || | ||||| ||| || |||||| ||| |||||||| | | | Sbjct 17283 ACCTTCGGGTTCGGCCTTGGCACCAGCTGGGAAT-----CGCGGCTGATCCAGCAGTCGA 17229 Query 156316 TTCTGAAAAACCGTATCCGTGGCCTGGGTAAAAAAGGTATTACTCCGGTATTCCCTAAAC 156375 ||||| ||||| || ||||| |||||||| | | || |||| ||||| |||| Sbjct 17228 TTCTGCGCAACCGCATTGCCGGCCTCGGTAAAAATCGCAAAACCGCGGTGTTCCCGAAAC 17169 Query 156376 TGGTTATGTTC---ATGGAAAAAGGCATTAACCTTGATCCAGAGGATCGCAACTATGACA 156432 ||| ||||| || | ||| | |||| | | | || | ||||| |||| Sbjct 17168 TGG---TGTTCGCGATCCGCGACGGCCTGAACCATAAGTTCGGCGACCCGAACTACGACA 17112 Query 156433 TCAAACAACTGGCTCTGGAATGCGCTTCAAAACGTATGTACCCAGATATCATTAGTGCAT 156492 ||||||| ||||| ||||| ||||| || || |||||||| |||||| | | | Sbjct 17111 TCAAACAGCTGGCGCTGGAGTGCGCCAGCAAGCGCATGTACCCGGATATCCTCA---ACT 17055 Query 156493 ATAAT-AACCGTCGCA--TCACTGGTTCTAGCGTTCCTGTATCTCCTATGGGTTGTCGCA 156549 | || | | | | |||| || | |||| | | | || ||||| || |||| Sbjct 17054 ACGATCAGGTGGTGAAAGTCACCGGGT----CGTT--TAAAACGCCGATGGGCTGCCGCA 17001 Query 156550 GTTTCCTTAGTGTGTGGCATGATGATAACGGTAATGAAGTTCTGGATGGACGTAATAACC 156609 | ||||| | || ||| | | || ||||| | | || | |||||||| ||||||| Sbjct 17000 GCTTCCTCGGGGTATGGGAAAACGAGAACGGCGAGCAGGTGCATGATGGACGCAATAACC 16941 Query 156610 TGGGTGTGGTGACAATCAACCTCCCGCGTATTGCTCTTGAAGCACAATCGCAGGAAGATG 156669 | || ||| | | ||||||| ||||| || || || |||| || | | |||| Sbjct 16940 TCGGCGTGATCAGTCTCAACCTGCCGCGCATCGCCCTGGAAG------CGAAAGGCGATG 16887 Query 156670 AAGACGCACATGACGCATTCTGGCGTATCCTTGATGAACGTCTGGAACTGTGCTTTGAAG 156729 || | ||| |||||| | || || || || ||| | ||| ||| Sbjct 16886 AA---------GCCGCCTTCTGGGCGCTGCTGGACGAGCGCCTGCAGCTGGCGCGCAAAG 16836 Query 156730 CCCTGATGACTCGCATCGATAGCCTACGCGGTGTTAAAGCCAGTGTAGCCCCGATCCTGT 156789 | |||||||| || |||| |||| || || || || | || || |||||||||| Sbjct 16835 CGCTGATGACCCGTATCGCCCGCCTGGAAGGAGTGAAGGCTCGCGTGGCGCCGATCCTGT 16776 Query 156790 ACACGGAAGGTGCATTCGGTGTTCGTCTGAATCCTGATGATGAAATCCTGGAACTGTTCA 156849 | | |||||| || | ||| || || ||||| | || || || || || | |||| Sbjct 16775 ATATGGAAGGCGCCTGCGGCGTGCGGCTGAAAGCCGACGACGACGTCTCCGAGATCTTCA 16716 Query 156850 AAAATGGGCGTAGCTCTATCAGTCTGGGTTATATCGGATTGCATGAAAC 156898 |||| || || || || |||||| |||||||| | |||||||| Sbjct 16715 AAAACGGCCGCGCGTCCATTTCTCTGGGCTATATCGGTATCCATGAAAC 16667 >seq3869 Length=8584 Score = 187 bits (206), Expect = 3e-42 Identities = 358/524 (68%), Gaps = 18/524 (3%) Strand=Plus/Minus Query 41794 TCGTTACCTACGCCTATTATGGCTGGTGTGCGTACTCCTACGCGTCAGTTTTCCAGTTGC 41853 ||| | || ||||| || ||| | || |||||||| || || |||||||| | ||| Sbjct 4766 TCGCTGCCGACGCCGATCATGTCCGGCGTGCGTACCCCAACCCGTCAGTTCAGCTCCTGC 4707 Query 41854 GTAGTGATTGAATCAGGTGATTCACTGGGTTCTCTGAATGCTGTAACCTCT---GCGATC 41910 || |||| || | || || |||| ||| | || || ||||| ||||| Sbjct 4706 GTGCTGATCGAGTGCGGCGACAGCCTGGATTCCATCAACGCC---ACCTCCAGCGCGATT 4650 Query 41911 GTGAAGTATATTTCACAACGCGCGGGTATCGGTGTTAATGCTGGACACATTCGCGCAATG 41970 ||||| || |||| || ||||| || ||||| | || || || | ||||||||| || Sbjct 4649 GTGAAATACGTTTCCCAGCGCGCCGGCATCGGCATCAACGCCGGGCGCATTCGCGCGCTG 4590 Query 41971 GGTTCTAAAATCCGTGGTGGTGAAGCAGTACATACAGGCGTGATCCCGTTCTGGAAACAT 42030 || ||||| || || ||||| | || || ||| || ||||||| || ||| Sbjct 4589 GGCAGCCCGATCCGCGGCGGCGAAGCCTTCCACACCGGCTGCATTCCGTTCTACAAGCAT 4530 Query 42031 ATTCAGACAGCGGTTAAATCCTGTTCACAAGGTGGCGTTCGTGGTGGTGCTGCAACGTTG 42090 | ||||| ||||| |||||||| || || || ||||| || || || || ||||| | Sbjct 4529 TTCCAGACCGCGGTGAAATCCTGCTCGCAGGGCGGCGTGCGCGGCGGCGCGGCAACCCTC 4470 Query 42091 TATTATCCGATCTGGCATTTGGAAGTTGAAAACCTGCTGGTTCTGAAAAACAACAAAGGT 42150 | || || || |||||| ||||||| |||| ||||||||| |||||||||||| ||| Sbjct 4469 TTCTACCCAATGTGGCATCTGGAAGTGGAAAGCCTGCTGGTGCTGAAAAACAACCGTGGT 4410 Query 42151 GTTGAGAATAACCGTATTCGTCACCTGGATTATGGCGTTCAGCTTAACGATTTGATGTAT 42210 || ||||| |||||||| |||| || || || ||| | ||| | ||||||| Sbjct 4409 ACCGACGCCAACCGCGTTCGTCACATGGACTACGGGGTACAGATCAACAAGCTGATGTAC 4350 Query 42211 AAGCGTTTAATCAATAACGATTACATCACACTGTTCAGCCCT---GACGTTGCAAATGAT 42267 | ||| | | || || | || || |||||||||||| ||||| | Sbjct 4349 ACCCGTCTGCTGAAGGGCGGCGATATTACCCTGTTCAGCCCTTCCGACGTCCC------G 4296 Query 42268 CGCCTGTATGATGCTTTCTATCAAGCTGATCAGACTGAGTTCGA 42311 |||||||||| || |||| || || |||||| ||||| || Sbjct 4295 GGCCTGTATGACGCCTTCT-TC--GCCGATCAGGACGAGTTTGA 4255 Score = 98.7 bits (108), Expect = 1e-15 Identities = 295/448 (66%), Gaps = 27/448 (6%) Strand=Plus/Minus Query 42957 CGATTGGGAATGGTTGCGCGGCGAAATCAAAAAATATGGCTTGCGTAACTCAACTCTTTC 43016 ||| |||||| ||||||| || |||| | ||| |||| |||||||| || || Sbjct 3591 CGACTGGGAAGCATTGCGCGAGTCCATTAAAACTCACGGCCTGCGCAACTCAACGCTCTC 3532 Query 43017 CGCTTTAATGCCATGTGAGAGTAGTTCTCAAGTAAGCAACTCAACAAACGGGATTGAACC 43076 ||| | ||||| | |||| || || | |||| | || ||||| ||||| || Sbjct 3531 CGCACTGATGCCGTCCGAGACCTCGTCGCAGATCTCCAACGCCACCAACGGCATTGAGCC 3472 Query 43077 GCCTCGCGGTCCTGTGAGTGTGAAATCTTCGAAAGAAGGT-TCATTCAACCAGGTAGTAC 43135 ||| ||||| | |||||| | ||| | || || || ||| || | | |||||| || | Sbjct 3471 GCCGCGCGGCCACGTGAGTATCAAAGCGTCCAAGGACGGTATCCTGCG-CCAGGTGGTGC 3413 Query 43136 CGAA---CCAGAACGATCAGATTGATTTCTATGATTATCTCTGGACAATGGCAAAACGCG 43192 || | | | ||| |||| | ||| || || ||| ||| | || || Sbjct 3412 CGGATTACGAAAACCTGCAGAACGC---CTACGAGCTGCTGTGGGAGATGCCGAACAACG 3356 Query 43193 GTAATAAAGGTTATCTGTCTCATGTTGCTGTTATGCAGAAGTTTGTTGATCAAGCGATCT 43252 | ||||||||| | || | | | |||||||||||| | || || |||||| Sbjct 3355 ------ACGGTTATCTGCAGCTGGTGGGTATCATGCAGAAGTTTATCGACCAGTCGATCT 3302 Query 43253 CTGCAAACACCAACTATGATCCGGCTAACTTCCCAGATGGTAAAGTGAAATCTGAAACCA 43312 |||| ||||| ||||| |||||| | |||||| || |||||| | | | || Sbjct 3301 CTGCCAACACTAACTACGATCCGACGCGCTTCCCGTCCGGAAAAGTG----CCG-ATGCA 3247 Query 43313 TCA-TTG----ATGACCTGCTTTATGCGAACTACTACGGCGTGAAAACTCTGTATTATCA 43367 || ||| | |||||||| | || | | | |||||| ||||| ||||| ||||| Sbjct 3246 GCAGTTGCTCAAAGACCTGCTCAACGCCTATAAATTCGGCGTCAAAACGCTGTACTATCA 3187 Query 43368 CAACACCCGCGACGGTGCAGGTGAAGAC 43395 ||||||||| || || || ||||||| Sbjct 3186 CAACACCCGTGATGGCGC---TGAAGAC 3162 >seq2516 Length=21774 Score = 147 bits (162), Expect = 3e-30 Identities = 144/186 (77%), Gaps = 0/186 (0%) Strand=Plus/Plus Query 51920 GTTGAAGGTGGACAGCACCTAAACGTGAATGTGCTACGTCGCGAAACCCTGGAAGATGCT 51979 || ||||| || |||||||| ||||| || ||||| ||||||||||||||| || || Sbjct 1776 GTCGAAGGCGGTCAGCACCTGAACGTTAACGTGCTGCGTCGCGAAACCCTGCTGGACGCG 1835 Query 51980 GTGAAACATCCTGAGAAGTACCCACAGTTAACGATCCGCGTTTCAGGTTATGCAGTTCGC 52039 || | ||||| || || || || ||| | || || || ||||| || || || || ||| Sbjct 1836 GTTGAGCATCCGGAAAAATATCCGCAGCTGACCATTCGTGTTTCCGGCTACGCGGTACGC 1895 Query 52040 TTTAATGCACTGACTCCAGAACAACAGCGCGACGTTATCGCCAGAACCTTTACGGAAAGC 52099 || || | ||||| || ||||| ||||||||||| |||||| | |||||||| |||||| Sbjct 1896 TTCAACTCTCTGACGCCGGAACAGCAGCGCGACGTAATCGCCCGTACCTTTACCGAAAGC 1955 Query 52100 ATGTAA 52105 ||||| Sbjct 1956 CTGTAA 1961 >seq2100 Length=19628 Score = 118 bits (130), Expect = 1e-21 Identities = 168/234 (72%), Gaps = 2/234 (1%) Strand=Plus/Plus Query 40659 GACCAGATT-GCTCGGATCGTCAACGAACTGAAAACCACACCAGACGATCGCGGGATCAT 40717 |||||||| || ||| | | ||| | ||||||| | || ||| ||| ||||||| Sbjct 19396 GACCAGATCAGCACGG-TGATGAACCAGCTGAAAAACGACCCGGACTCCCGCCGGATCAT 19454 Query 40718 CGTTTCCGCATGGAACCCTGTTGATCTGGATAAAATGGCATTGCGTCCGTGTCACTGTTT 40777 ||| || ||||||||| | || |||||||||||||| || ||||| ||| || Sbjct 19455 CGTCTCGGCATGGAACGTCGGCGAGCTGGATAAAATGGCGCTGGCGCCGTGCCACGCCTT 19514 Query 40778 CTTCCAGTTCGTCGTAATCAACGGTAAACTGTCTCTACAGTGGTATCAGCGTTCGGTTGA 40837 |||||||||| ||| | |||| || || || ||| |||||||||||| || Sbjct 19515 CTTCCAGTTCTACGTCGCCGACGGCAAGCTCTCCTGCCAGCTGTATCAGCGTTCCTGCGA 19574 Query 40838 TGTCTTCTTAGGGTTGCCGTTCAATATCGCCTCCTACGCTCTCCTGACGCATAT 40891 ||| ||| | || ||||||||||||||||| ||| || || ||| |||||| Sbjct 19575 TGTGTTCCTCGGCCTGCCGTTCAATATCGCCAGCTATGCGCTGCTGGTGCATAT 19628 >seq2053 Length=29219 Score = 91.5 bits (100), Expect = 2e-13 Identities = 75/90 (83%), Gaps = 1/90 (1%) Strand=Plus/Plus Query 103740 TATATAGAGAAAAATGTAGTTTTTGGTATACTTTTTGTACAGATGTTAACTATCCGTCTT 103799 |||||||| |||| ||| ||| |||| ||||| || | | |||||||||||||| Sbjct 12526 TATATAGAAAAAACAGTACATTTCCGTATGTTTTTTAATCA-ACGCTAACTATCCGTCTT 12584 Query 103800 CGCTTCGCTTGACGGAACTCGCTTCGCTCG 103829 |||||||||||||||||||||||||||||| Sbjct 12585 CGCTTCGCTTGACGGAACTCGCTTCGCTCG 12614 >seq272 Length=21754 Score = 87.8 bits (96), Expect = 2e-12 Identities = 123/173 (71%), Gaps = 0/173 (0%) Strand=Plus/Plus Query 51920 GTTGAAGGTGGACAGCACCTAAACGTGAATGTGCTACGTCGCGAAACCCTGGAAGATGCT 51979 || || || |||||||| || ||||| ||||| || || |||| ||| ||||| Sbjct 8036 GTGGAGGGGGGACAGCATCTCAACGTCAATGTACTGAACCGGGAAAAGCTGCTCGATGCG 8095 Query 51980 GTGAAACATCCTGAGAAGTACCCACAGTTAACGATCCGCGTTTCAGGTTATGCAGTTCGC 52039 | |||| || ||| |||| || | | ||||||||||| || || ||||| || ||| Sbjct 8096 ATAGAACACCCGGAGCAGTATCCGAATCTGACGATCCGCGTCTCCGGCTATGCGGTCCGC 8155 Query 52040 TTTAATGCACTGACTCCAGAACAACAGCGCGACGTTATCGCCAGAACCTTTAC 52092 ||||| || ||||| | || || |||| || || ||| || |||| || || Sbjct 8156 TTTAACGCGCTGACCCGCGAGCAGCAGCAGGATGTGATCTCCCGAACGTTCAC 8208 >seq345 Length=175672 Score = 86.0 bits (94), Expect = 7e-12 Identities = 131/183 (72%), Gaps = 4/183 (2%) Strand=Plus/Plus Query 40706 TCGCGGGATC--ATCGTTTCCGCATGGAACCCTGTTGATC-TGGATAAAATGGCATTGCG 40762 |||||| || ||||||||||||||||| || | | || | ||| ||||||| ||| Sbjct 150720 TCGCGGCGTCTGATCGTTTCCGCATGGAATCC-GGCGCTCGTCGATGAAATGGCGCTGCC 150778 Query 40763 TCCGTGTCACTGTTTCTTCCAGTTCGTCGTAATCAACGGTAAACTGTCTCTACAGTGGTA 40822 || || ||||| | ||||||||| ||| | |||| || || || ||| || Sbjct 150779 GCCCTGCCACTGCCTGTTCCAGTTCTACGTGGCCGACGGAAAGCTTTCCTGCCAGCTCTA 150838 Query 40823 TCAGCGTTCGGTTGATGTCTTCTTAGGGTTGCCGTTCAATATCGCCTCCTACGCTCTCCT 40882 ||||| || | ||| |||| | || |||||||||||||||| ||||| || || || Sbjct 150839 CCAGCGCTCCGCCGATATCTTTCTCGGCGTGCCGTTCAATATCGCATCCTATGCCCTGCT 150898 Query 40883 GAC 40885 ||| Sbjct 150899 GAC 150901 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 577268246223200