Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acytostelium_20leptosomum_20[genbank_20GCA_5F900092245.1_202017-01- 02] 28,227 sequences; 57,256,845 total letters Query= NC_007145.2 Length=37639 Score E Sequences producing significant alignments: (Bits) Value seq7329 257 4e-64 seq19415 156 1e-33 >seq7329 Length=1002 Score = 257 bits (284), Expect = 4e-64 Identities = 310/420 (74%), Gaps = 10/420 (2%) Strand=Plus/Plus Query 5108 GCAGCCACGCCGGCTTCATCCTGTACATGACCGACGCCGCGCAGAAGCAGGACGACGTGG 5167 ||||||| ||||| ||||| ||||||||||||||||| ||||||||| | || ||| | | Sbjct 1 GCAGCCATGCCGGTTTCATTCTGTACATGACCGACGCGGCGCAGAAGGAAGAGGACATCG 60 Query 5168 ACAACATGCGCGACGCGCTGAAGAACGCGAAGGGGCCTGGCAACTTCCGCAACGTGTTCA 5227 || ||||| ||| ||||||||| |||| ||||| |||||||| |||||| |||| Sbjct 61 ACTCACTGCGCACCGCACTGAAGAACTCGAAAGGGCCAGGCAACTTTCGCAACCTGTTTG 120 Query 5228 TGTACGCGCCGGGCGGGAAGAAGGACGGCATCCAGCTCATCCCCGTGTCCGAGGTCGCCG 5287 |||||||||||| || ||||| |||||||| ||||||||||| ||| |||||| || | Sbjct 121 TGTACGCGCCGGCAGGCAAGAAAGACGGCATTCAGCTCATCCCGGTGAGCGAGGTTGCGG 180 Query 5288 CGAAGGACGAGTTCTTCAACATCAAGAACGTGACGCGCGATGACCTGCTCGCCGCGCACC 5347 | |||||||| ||| | ||||| ||| | | || || || |||||||| ||| | Sbjct 181 CCAAGGACGAATTCAGCTCGATCAAAAACATCAGCCGTGACGATCTGCTCGCGGCGTTGC 240 Query 5348 GCGTGCCGCCGCAGTTGCTTGGCATCGTGCCGAGCAATTCGGGCGGGTTCGGTAC---AC 5404 || | || ||||||||| | |||||||||||| || ||||||| || || | | Sbjct 241 GCATTCCACCGCAGTTGATGGGCATCGTGCCGCAGAACGCGGGCGGTTTTGGGTCGTTGC 300 Query 5405 CGGACACCGCCGCGCGCGTGTTCGGGCG--CAACGAAATCAGGCCGCTACAGGCGCGCTT 5462 ||| | || | | ||| ||||| |||||| | |||| | |||||| | | Sbjct 301 GGGAGGCTGCTGAG-----GTTTGGGCGGTCAACGAGCTGGAGCCGTTGCAGGCGAGGCT 355 Query 5463 CGCCGAGCTGAACGACTGGCTCGGCGAGGAGGTCGTGAGGTTCGACGATTACGAGATTCC 5522 ||| || | ||||| ||||| || || ||||| || |||||| | || | ||| |||| Sbjct 356 GGCCCAGGTCAACGAGTGGCTGGGTGAAGAGGTTGTCAGGTTCAAGGAGTTTGAGCTTCC 415 >seq19415 Length=1017 Score = 156 bits (172), Expect = 1e-33 Identities = 206/286 (72%), Gaps = 0/286 (0%) Strand=Plus/Minus Query 4129 CTACATCGCGATCGACACCACGGGCATGGGGCAAGGCGTCTACCAGCTCGTGCGCAAGTT 4188 |||||||| |||||| | ||| |||| ||| ||||| ||||| ||| |||| Sbjct 972 CTACATCGGGATCGATATCACCGGCACGGGTTCCGGCGTGGCGCAGCTGGTGAAGCAGTT 913 Query 4189 CTTCCCGGCCGCCGTCGCGCTGAACTACTCGCCCGAGGTGAAAACCCGCCTCGTGCTCAA 4248 ||||||| | | | || | | |||||| ||||| || ||||||||||| ||||| || Sbjct 912 CTTCCCGAACATCACCACGTTCAGCTACTCACCCGAAGTCAAAACCCGCCTGGTGCTGAA 853 Query 4249 GGGCCAGTCCGTCGTCCGGAACGGCCGCCTGCAATTCGACGCGGGCTGGACCGATCTGGC 4308 || | |||| || |||||| | ||| | ||||| ||||||||||| ||| |||| Sbjct 852 GGCTTACGACGTCATCAAAAACGGCAGGCTGGAGTTCGATGCGGGCTGGACGGATATGGC 793 Query 4309 GGCGGCGTTCATGGCGATCAAACAGACGATGACGGCGAGCGGCCGTCAGGCGACCTACAC 4368 | | | || ||||| ||| | || || || || ||| || | || ||||| Sbjct 792 GCAGTCATTGATGGCTATCCGCAAAACAATCACCGCCTCCGGGCGCATGTTCACTTACAC 733 Query 4369 CGCCGGCCGCACCGACGAGACGGGCCACGCCGACCTGGCGTGGGCG 4414 ||||| ||||| |||||||||||||| |||||||| ||||||||| Sbjct 732 GGCCGGTCGCACAGACGAGACGGGCCATGCCGACCTAGCGTGGGCG 687 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 120282868189774