Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acytostelium_20leptosomum_20[genbank_20GCA_5F900092245.1_202017-01- 02] 28,227 sequences; 57,256,845 total letters Query= NC_007710.1 Length=46643 Score E Sequences producing significant alignments: (Bits) Value seq4821 152 2e-32 seq9346 129 2e-25 >seq4821 Length=4025 Score = 152 bits (168), Expect = 2e-32 Identities = 294/429 (69%), Gaps = 6/429 (1%) Strand=Plus/Minus Query 35447 GTGAAGTTGCTCGACCCGCGTTTCGGCGATCTGTGGCCGTTGCCGGCCTATGCCACCGAA 35506 || ||| | || ||||||||| ||||| | | | ||| ||||| ||||||||||| Sbjct 2735 GTTAAGATTCTGGACCCGCGTGTCGGCCAGCAATTTCCGCTGCCGACCTATGCCACCTCC 2676 Query 35507 GCCAGTGCAGGCATGGACCTGCGTGCCGCACTGGAGG-CGCCGATGACGTTGCAGCCGGG 35565 | | || || | || ||||| ||| || || | ||||| || | || |||||| Sbjct 2675 GGCTCCGCCGGACTTGATCTGCGAGCCTGTCTCGACGACGCCGTAGAGCTGGC-GCCGGG 2617 Query 35566 CGATGCGGCGCTGATTCCCAGCGGCATCGCGATCCATCTGGCCGACCCGCAGCTGTGCGC 35625 || | ||||| | || | |||| | ||||| ||| | ||||| || ||| || Sbjct 2616 CGCAACCACGCTGTTGCCGACCGGCCTTGCGATTCATATCGCCGATCCCTCTCTGGCGGC 2557 Query 35626 GGTGATCCTGCCGCGCTCGGGGCTTGGCCATCGTCACGGCATCGTACTCGGCAAC--GGT 35683 |||||||||||||||||| || || || ||| || ||| | || || |||||| ||| Sbjct 2556 GGTGATCCTGCCGCGCTCCGGCCTGGGTCATAAGCATGGCGTAGTCCTGGGCAACCTGGT 2497 Query 35684 ACCGGCCTCATCGATGCGGATTACCAGGGGTCGTTGTTGATCAGCACCTGGAATCGCGGC 35743 ||||| ||||| | |||||||||||| | || || | | |||||| ||||| Sbjct 2496 G--GGCCTTATCGACTCCGATTACCAGGGGCAGCTGATGGTGTCCGTCTGGAACCGCGGT 2439 Query 35744 CGCGAGGCCTTCACCATCGAGCCGGGCGACCGGATTGCGCAGCTGGTGATCCTGCCGGTC 35803 | || ||| | |||||||||||||| || || || ||| |||| | |||||||| Sbjct 2438 CAGCAGAGCTTTATTATCGAGCCGGGCGAACGTATCGCACAGATGGTCTTTGTGCCGGTC 2379 Query 35804 GTGCGCGTAGGCTTGCGAGTGGTGGACACTTTCGTCGACAGCGCGCGCGGCGCGGGTGGA 35863 || | | | || ||||||| | |||| | || || ||||||| || || Sbjct 2378 GTTCAGGCGGAATTTAACCTGGTGGAATCCTTCGATGCCACCGACCGCGGCGAAGGCGGC 2319 Query 35864 TTCGGTCAC 35872 ||||||||| Sbjct 2318 TTCGGTCAC 2310 >seq9346 Length=3494 Score = 129 bits (142), Expect = 2e-25 Identities = 313/460 (68%), Gaps = 22/460 (5%) Strand=Plus/Minus Query 35441 TTGCAGGTGAAGTTGCTCGACCCGCGTTTCGGCGATCTGTGGCCGTTGCCGGCCTATGCC 35500 ||||| | ||| | |||||||| || ||||| | | ||| |||||||||| ||| Sbjct 2043 TTGCAAGCCAAGATCCTCGACCCCCGCATCGGCAACGAATTCCCGCTGCCGGCCTACGCC 1984 Query 35501 ACCGAAGCCAGTGCAGGCATGGACCTGCGTGCCGCACT---GGAGG-CGCCGATGACGTT 35556 || || | || ||| | ||||| |||||| || | ||| | ||| || || Sbjct 1983 ACACCAGGCTCCGCCGGCCTCGACCTACGTGCCATGCTCAAGCAGGACACCG-TGC--TT 1927 Query 35557 GCAGCCGGGCGATGCGGCGCTGATTCCCAGCGGCATCGCGATCCATCTGGCCGACCCGCA 35616 | | || ||| | | |||||||| | |||| | ||||| | ||| ||||||| Sbjct 1926 GAA-CCAGGCCAGACCATTCTGATTCCGACCGGCCTGTCGATCTACGTGGGCGACCCGGG 1868 Query 35617 GCTGTGCGCGGTGATCCTGCCGCGCTCGGGGCTTGGCCATCGTCACGGCATCGTACTCGG 35676 ||| ||| |||||||||||||||| || || ||||| ||||||||||| ||||| Sbjct 1867 CCTGGCGGCGCTGATCCTGCCGCGCTCCGGCCTGGGCCACAAACACGGCATCGTCCTCGG 1808 Query 35677 CAAC--GGTACCGGCCTCATCGATGCGGATTACCAGGGGTCGTTGTTGATCAGCACCTGG 35734 |||| ||| || || ||||| |||| |||||||| |||| || | | |||| Sbjct 1807 CAACCTGGT--GGGGCTGATCGACTCGGACTACCAGGGCGAGTTGATGGTGTCCTGCTGG 1750 Query 35735 AATCGCGGCCGCGAGGCCTTCACCATCGAGCCG--GGCGACCGGATTGCGCAGCTGGTGA 35792 || || |||| || |||| ||| |||| ||||| || ||||| || || ||| Sbjct 1749 AACCGTGGCCAGACCGCGTTCAATATC--GCCGTCGGCGAGCGCATTGCCCAACTCGTGC 1692 Query 35793 TCCTGCCGGTCGTGC--GCGTAGGCTTGCGAG-TGGTGGACACTTTCGTCGACAGCGCGC 35849 | | ||||| |||| ||| | ||| |||| |||| || |||| ||| | | Sbjct 1691 TGGTACCGGTGGTGCAGGCGCA--CTT-CGAGCTGGTCGAAGAGTTCGACGAAACACAAC 1635 Query 35850 GCGGCGCGGGTGGATTCGGTCACACCGGCGTGCGCTGACT 35889 ||||||| ||||| ||||| || ||||| | |||||| Sbjct 1634 GCGGCGCAGGTGGCTTCGGGCATTCCGGCAGCCACTGACT 1595 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 149086010265270