Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acytostelium_20leptosomum_20[genbank_20GCA_5F900092245.1_202017-01- 02] 28,227 sequences; 57,256,845 total letters Query= NC_007805.1 Length=39199 Score E Sequences producing significant alignments: (Bits) Value seq2286 221 3e-53 seq278 120 8e-23 >seq2286 Length=7100 Score = 221 bits (244), Expect = 3e-53 Identities = 185/227 (81%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 29791 CGCGAGATCGCGGATCTTGTCGAGGCTCGCCACAACGACGTTGTCACGACCATCGAACGT 29850 || || ||||| ||||| |||||||| || |||||||| || |||| |||||||| ||| Sbjct 2425 CGGGAAATCGCCGATCTAGTCGAGGCCCGGCACAACGATGTAATCACCACCATCGAGCGT 2484 Query 29851 CTCTTCGACAAGGGGCTTTTACGATCAAGTCGTAAAACTCGCCGGGAGTCCACCGGTGGC 29910 || || | ||| ||||||||||||||| |||||||||||| || || ||||||| ||| Sbjct 2485 CTTTTTGCCAAAGGGCTTTTACGATCAGATCGTAAAACTCGGCGTGAAGCCACCGGCGGC 2544 Query 29911 CGTCCGATCGCTGTGTATGACCTGATCGAGAGGGATACTCACCTGGTCGTTGCTGGTTAC 29970 || ||||| | ||| || ||||||| |||| | ||||| || |||||||| ||||| ||| Sbjct 2545 CGACCGATTGATGTCTACGACCTGACCGAGCGTGATACGCATCTGGTCGTGGCTGGCTAC 2604 Query 29971 AGCGATGAGCATCGTGCCCGAGTGATCGACCGCTGGCAGCAGCTTGA 30017 ||||| ||||| || || ||||| ||||||||||||||| | || || Sbjct 2605 AGCGACGAGCACCGCGCACGAGTTATCGACCGCTGGCAGGAACTGGA 2651 >seq278 Length=18759 Score = 120 bits (132), Expect = 8e-23 Identities = 311/472 (66%), Gaps = 4/472 (1%) Strand=Plus/Minus Query 767 GCCATCCTGAACGCCATGGGTAACGACCTGATTCGGGTCGTAAACTTCGTGAAGTCGGCA 826 |||||| |||| || ||||| | |||| || || | || || | |||||||| || Sbjct 18757 GCCATCATGAATGCGATGGGCAGCGACTACATCCGTGAGGTGAATGTGGTGAAGTCTGCC 18698 Query 827 CGCATCGGCTACACGAAAATGCTGATGGCCAACATCGGCTACAAGATTCAGCACAAGCGC 886 || |||| || | ||||||||| ||| | |||| || |||| |||| Sbjct 18697 CGTGTCGGTTATTCCAAAATGCTGCTGGGTGTTTATGCCTACTTTATAGAGCATAAGCAG 18638 Query 887 CGTAATGTGCTGATGTGGAGCCCGACTGACCCAGACGCCGAGGGGATCAGCAAGAGCCAC 946 || || || || ||| ||||| || || |||||| | | || | |||| Sbjct 18637 CGCAACACACTTATCTGGTTGCCGACGGATGGTGATGCCGAGAACTTTATGAAAACCCAC 18578 Query 947 GTTAAT--GGCCTGATTCGCGATGTTCCGGTGCTGCTGGCGCTGGCCCCATGGTATGGCC 1004 ||| | | || || |||||| ||||| ||||||||||||||| || ||||||||| Sbjct 18577 GTTGAGCCGACC--ATCCGCGATATTCCGTCGCTGCTGGCGCTGGCTCCGTGGTATGGCA 18520 Query 1005 GCAAGCATAGCGACAACACGCTCGACACCAAGGTGTTTGCAAACCGGCGGACCCTTTGGA 1064 ||||| | || ||||||||| | ||| ||| | || | || | | ||| Sbjct 18519 AAAAGCACCGGGATAACACGCTCACTATGAAGCGTTTTTCCAATGGTCGTGGCTTCTGGT 18460 Query 1065 CGCTCGGCGGCAAGGCTGCTCGCAACTACCGTGAGAGATCTGCCGACGAGGTGATCTATG 1124 || ||||| || || || ||||||||||| | || | || | || | |||| Sbjct 18459 GCCTGGGCGGTAAAGCGGCAAAAAACTACCGTGAAAAGTCGGTGGATGTGGCGGGTTATG 18400 Query 1125 ACGAGCTGTCGAAGTTCGACGCCGATATTGAAGGTGAAGGTTCCCCAACGTTCCTTGGCG 1184 | || || | || || | ||||||||| ||||| || || ||||||||||||| Sbjct 18399 ATGAACTTGCTGCCTTTGATGAGGATATTGAACAGGAAGGCTCTCCGACGTTCCTTGGCG 18340 Query 1185 ACCAACGTCTGCGCGGTGCTGTTTACCCGAAGTCCATCCGTGGATCGACGCC 1236 || ||||| | || | || | || |||||||||||||| || ||||| Sbjct 18339 ACAAACGTATTGAAGGCTCGGTCTGGCCAAAGTCCATCCGTGGCTCCACGCC 18288 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 125273194893214