Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acytostelium_20leptosomum_20[genbank_20GCA_5F900092245.1_202017-01- 02] 28,227 sequences; 57,256,845 total letters Query= NC_008291.1 Length=198050 Score E Sequences producing significant alignments: (Bits) Value seq19 291 1e-73 seq3533 201 1e-46 seq1043 156 5e-33 >seq19 Length=770976 Score = 291 bits (322), Expect = 1e-73 Identities = 810/1225 (66%), Gaps = 28/1225 (2%) Strand=Plus/Minus Query 62483 GCACCGTAATAAATGGTTTCGAAGATCTTCTTATTTAGA--TCTTGCGCTTCCAGGCTAT 62540 ||| || ||||||| ||||| || || | ||||||| | | |||| | | || || | Sbjct 362637 GCAGCGAAATAAATCGTTTCAAAAATTTCTTTATTTAAAATTTTTGCCCCTTCA--CTTT 362580 Query 62541 CAAATGGATAATTTAAGAGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAG 62600 ||||||| || | || ||||| || ||||| ||||| || ||||| | ||| | | Sbjct 362579 CAAATGGTAAACGCATCAGGATAAAAGCATCTGCCAATCCCTGTACACCTAAACCAACTG 362520 Query 62601 GTCTATGTCTCTTATTAGAGATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAA 62660 |||| || | | | || || ||| |||||| | |||||||||||| ||| |||| Sbjct 362519 GTCTGTGGCGCATGTTGGAATTTTTAGCTTCCTCTACCGGATAATAATTATGATCAATAA 362460 Query 62661 TTTTATTGAGATTTCTGACAATTACTTTGACCACATCCTTCAGTTTGAGAAAATCAAATC 62720 ||||||| || || | | | | ||||| | | ||| || |||||| Sbjct 362459 TTTTATTCAGGTTCAGGGTAGCCTGATAGGTTACATCATATAATTTCTGATGATCAAACT 362400 Query 62721 GCCCATCTATTACAAACATGTTCAATGCAACAGATGCCAGATTACAAACGGCTACCTCAT 62780 || | || ||||| | ||| || | || ||||| ||||| || || ||||| | Sbjct 362399 CTCCGTTGATGACAAATCTTGGCAAAGCCAACGAGGCCAGGTTACATACAGCAACCTCGT 362340 Query 62781 --TAGCATCCGCATATTGTATTATCTCAGTGCAAAGATTACTACACTTGATGGTTCCTAA 62838 | | | | ||| | ||| || || || ||||| || || |||||||||||||| Sbjct 362339 CTTTGGAA--GTATACTCTATAATTTCTGTACAAAGGTTGGAACTTTTGATGGTTCCTAA 362282 Query 62839 ATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTACCAGT 62898 |||||| || || || |||| ||||| ||||| | | | || || || || Sbjct 362281 ATTTTGCTGGTTGGATTTGCTGTTTGCTGCATCTTTATACAACAGATAAGGGGTTCCGGT 362222 Query 62899 TTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATAGATTT--- 62955 ||||||||| || || | ||| || ||| | || | || |||| || | ||| Sbjct 362221 TTCAATCTGTGAATCCAGAATGGCAAACCAAAGCTCTTGTGC-TTTA--ATGGTTTTACG 362165 Query 62956 -GTATCTCTTTTCTCTTTCGTATAGTGTATACAATCGTTCGAACTCGTCTCCCCAAACAT 63014 | | || || || ||||||| | ||| || ||||| || | || || || Sbjct 362164 GGCACGTCCTT-CTTTTTCGTAACGCTCATATAAAGCATCGAATTCTGCACCA-AAGCAA 362107 Query 63015 TGT-CCAGTCCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACT 63073 | | ||||||| || ||||| ||||| | || ||| ||||||| || | || Sbjct 362106 TCTGCCAGTCCCGGGGCTTCATGAGGACAGAATAAACTCCAGTCTCCGTTTTCTTCTACC 362047 Query 63074 CGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATA-AATAGATCTCTGGTTCTATGTTC 63132 | | |||| || || ||| | |||||| || ||| |||| |||||||| | | |||| Sbjct 362046 CTTCTCATGAACAGGTCACATACCCAAAGGGC-ATAGAATAAATCTCTGGCACGAAGTTC 361988 Query 63133 CTCGTTTCCTGTATTCTTTTTA---AGATCGAGGAACGCCATAATATCAGAATGCCACGG 63189 || || || || |||||| || || || || || | ||| | |||||| || Sbjct 361987 TTCTTTACC---ATGGTTTTTACGCAGGTCCAGAAAACTCAGCACATCTGCATGCCATGG 361931 Query 63190 TTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGC 63249 |||| ||| ||||| | | | || ||||| ||| ||||| || | || | || Sbjct 361930 CTCCAGGTAAATGGCAAAAGCACCTTTACGTTTACCTCCACCCTGGTCCACATAACGGGC 361871 Query 63250 GGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCTGA 63309 ||| | ||| | ||| ||||||| || | ||| |||||| || || || || || Sbjct 361870 GGTATCGTTAAATACTTTCAACATAGGTACAATCCCATTGCTGGTCCCGTTTGTTCCACC 361811 Query 63310 GATATAGCTTCCACTGGCACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTT 63369 ||||| ||| ||||||| || ||| || || ||| || || ||||| ||| Sbjct 361810 AATATAAGATCCCGTGGCACGGATGTTATGGATGCTTAAACCAATACCACCTGCGCTTTG 361751 Query 63370 AGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCAT 63429 || ||| ||| | ||||||| ||||| || || || || ||||| || ||| ||| Sbjct 361750 TGAAATTTTAGCGGTTTGTTTTAAAGTATCGTAAATTCCTTCAATACTGTCGTCCTGCAT 361691 Query 63430 GTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGG 63489 | | |||| ||| ||| ||||||||| | | || | ||||||||||| || || Sbjct 361690 GGTCAGTAAAAAGCAGGAAGACATTTGAGGTTTAGGGGTAGCTGCATTAAATAAAGTTGG 361631 Query 63490 AGAAGCGTGAGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTAT 63549 | || || |||||||| ||| | || || ||||| |||| || || || Sbjct 361630 GGTTGCATGCGTAAACCAGCGCTCACTCATCAGGTTATACGTTGCAATCGCACTTTCAAT 361571 Query 63550 ATCCCATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGAT 63609 ||| || ||||| ||||| || |||||||| |||| || || || | ||| || || Sbjct 361570 ATCTTCTTTGTGAATCCCTACGGCAACACGCATAAACAAATGTTGCGGGCGTTCTACAAT 361511 Query 63610 CTTGTTGTT-TATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGT 63668 |||| || |||||||| || ||||||||||| | |||||||| |||||||| | | Sbjct 361510 -TTGTCCTTCTATTTTCAGCAGATAGGATTTTTCAAGGGTTTTAAACCCAAAATAATCGA 361452 Query 63669 ATGAAAAGTCTCGTTCGTAAATAAT 63693 || ||| || | || |||||||| Sbjct 361451 ATCCAAAATCCCTGTCATAAATAAT 361427 Score = 219 bits (242), Expect = 5e-52 Identities = 579/877 (66%), Gaps = 9/877 (1%) Strand=Plus/Minus Query 32368 TTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTACCTTCTAATGATATAT 32427 ||||||| || |||||||||||||| || || ||||| ||||| |||| | || || Sbjct 360853 TTTTTTGATAATCACCCACACGTTTCTCAAAGAAATTGGTTTTGCCTTGCAGGGAGATCA 360794 Query 32428 TTTCCATGAAATCGAATGGATTGGTAACATTATAAAtttttttAAATCCCAATTCAGAAA 32487 | ||||| ||||| || |||||||| ||| ||| ||||| || | |||| ||| | Sbjct 360793 TCTCCATAAAATCAAACGGATTGGTGGCATGATATATTTTGGTATAACCCAGTTCCTGCA 360734 Query 32488 TCAATCTATCTGCGACAAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATAA 32547 | |||| ||||| ||||| || ||||| | ||||| || |||||| || || | Sbjct 360733 GCCATCTGTCTGCAACAAACTCAATATACTGTGACATCAGTTTTGCATTCATCCCGATCA 360674 Query 32548 GTTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATAGAGACCGCGTCTGTTATAA 32607 | ||| || | || | |||| |||||| | ||| || |||||||| |||| Sbjct 360673 GGGCAACCGGCAAGGCATCTGTAATAAATTCCTTTTCGATTTCTACCGCGTCGCGGATAA 360614 Query 32608 TAGATCTTACTGTTTCTTCACTCGGTGGATACAATAAATGTTTAAACATCAAACATGCGA 32667 | || ||| | ||| || || | |||| | | || || || | Sbjct 360613 TTCCATGAACGACTTCCTGGCTCAGTTTATTTTTGAGCATTTTATAAAGCAGGCAGGCAA 360554 Query 32668 AATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCA 32727 | || || || | ||||| ||||| ||| || || || ||| || || || |||| Sbjct 360553 ATTCACAATGCATCCCCTCATCTCTGGAAATCAACTCATTACTAAAGGTTAGCCCTGGCA 360494 Query 32728 TTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAA-AAGAAAATTCCT 32786 | ||||| | ||||| | ||| || || || || | | ||| | |||||||| ||| Sbjct 360493 TCAGGCCTCTTTTTTTCAACCAGAAGATCGAA-CAGAAGCTCCCGCTGAAGAAAATGCCT 360435 Query 32787 TCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGGCGCTGTCATGTATCCACTTT 32846 || ||||| || || || | | | || || || ||| ||| ||||| Sbjct 360434 TCCACTGCGGCGAAAGCCACCAAACGTTCGGCAAAATTTCCGCCCTCA---ATCCAGCGC 360378 Query 32847 TGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAGCATTAAAGAGATAG 32906 ||||| || || || || ||||||||||| | ||||||| |||| || || | Sbjct 360377 AATGCCCATTCTGCTTTTTTCTTTACACAAGGAACCGTCTCTACGGCATGGAACAGCCTG 360318 Query 32907 tttttttCATTACTATCTTTAACATATGTATCAATCAAAAGACTATACATTTCCGAATGA 32966 | |||||| | | |||||||| ||| ||||| |||| || ||| |||| || || Sbjct 360317 TCTTTTTCTTCAGGATCTTTAATATAGGTATCGATCAGCAGCGCATAGGTTTCAGAGTGG 360258 Query 32967 ATGTTTTCAATGGCCATTTGAAATCCGTAGAAGCATCTAGCCTCGGTAATCTGTACTTCT 33026 |||||||| || || || || || || || || | || |||| || ||||||||| Sbjct 360257 ATGTTTTCCATCATGATCTGGAAGCCATAAAAACAACGGGCTTCGGGAAGCTGTACTTC- 360199 Query 33027 GTACAAAATCGTT--CTGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACG 33084 | || | ||| |||| | |||||||| || || |||||||| || |||||||| | Sbjct 360198 GCTCATGA-AGTTCACTGCAAGGTTTTCATTTACAATGCCGTCACTTGCAGCAAAAAAAG 360140 Query 33085 CCAATACATGTTTTATAAAATATTTTTCGTCTGGTGTTAGTTTATTCCAATCATTGATAT 33144 | | || ||| || |||| ||| ||| ||| || | ||| | || | Sbjct 360139 CAAGTATATGAGAAATGAAATGACGCTCGCCTGTATTTAAGTTGTCCCAGTGCTTCTGGT 360080 Query 33145 CTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATAT 33204 | | ||| | || | |||||| | ||||| || ||| || ||| |||||||| | Sbjct 360079 CATCAGAAAGGTCAATTTCTTCAGCGGTCCAGAAACTTGCTTCACTCTTCTTATACATTT 360020 Query 33205 TCCAGATGTCATGATATTGAATTGGAAAAATAACAAA 33241 |||||| ||| | |||| ||| || |||| |||||| Sbjct 360019 CCCAGATTTCAGGGTATTTAATAGGCAAAAGAACAAA 359983 >seq3533 Length=1137 Score = 201 bits (222), Expect = 1e-46 Identities = 488/723 (67%), Gaps = 17/723 (2%) Strand=Plus/Minus Query 32534 ATTCATTCCTATAAGTTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATAGAGAC 32593 ||||||||| || || | |||||| || | | || | ||| |||| || |||||| Sbjct 1081 ATTCATTCCAATTAGATCAACTGGCAGCGAATCTGTGATAAACTCTTTCTCGCAAGAGAC 1022 Query 32594 CGCGTCTGTTATAATAGATCTTACTGTTTCTT-CACTCGGTGGATACAATAAATGTTTAA 32652 ||||| || ||||| || ||| || | || | || | || | | |||| Sbjct 1021 AGCGTCGCGGATGATAGACTCTATAGTTGCTGGCTCTAGACGG-TGCACCAGCTTTTTAT 963 Query 32653 ACATCAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAA 32712 ||| || || || || |||||||||||||||||||| | ||| || | |||||||||| Sbjct 962 ACAGCATGCAAGCAAAGTCGCAGTGTAGACCCTCGTCACGACTGATCAGCTCGTTGGAAA 903 Query 32713 ACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAG 32772 | || || || ||||||| || | || || | ||| | |||| | |||| | | | | Sbjct 902 AGGTAAGGCCTGGCATTAAACCCCTTTTCTTCAACCAGTAGATGG-CACAAAAGCTGCCG 844 Query 32773 AA-AAGAAAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCC--AT-AACCGGCG 32828 ||||| || || || || || ||||| || | | | || | || ||| | | Sbjct 843 CTGAAGAAGATACCCTCAACCGCAGCAAATGCCACCAAACGTTCGGCGAATGAACAAGAG 784 Query 32829 CTGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCT 32888 || || ||||| | ||||| || |||||||| ||||| || || |||||| Sbjct 783 TTGG--TG-ATCCAGCGCAGCGCCCACTCTGCCTTCTTCTTTACGGCGGGGATCGTCTCT 727 Query 32889 ATAGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCAATCAAAAGA 32948 || || || || || | | ||| | | ||| |||||| ||||| || ||||||||| Sbjct 726 ATCGCGTTGAAAAGCTCCTGTTTCTTTGTGCTACTTTTAACGTATGTGTCGATCAAAAGA 667 Query 32949 CTATACATTTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAGCATCTAGCC 33008 || || | || | |||||||| ||||| || || ||||| || |||||||| | ||| Sbjct 666 CTGTAGGTCTCTGCGTGAATGTTCTCAATCGCGATCTGAAAGCCATAGAAGCAGCGGGCC 607 Query 33009 TCGGTAATCTGTACTTCTGTACA-AAATCGTTCTGCTAAATTTTCATTCACTATTCCGTC 33067 || | || ||||| || | ||| ||||| || | ||| ||||| || || ||||| Sbjct 606 TCTGGTATTTGTACCTCAG-ACATGAATCGAGTGGCGAGATTCTCATTGACGATACCGTC 548 Query 33068 ACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCTGGTGTT-AGTT 33126 || ||||| || |||| |||| | ||||| | | ||||| || || || | Sbjct 547 TGATGCGGCAAAGAATGCCAGCACATTGGTGATAAAGTGTCGTTCGT-TGTCATTGAGCT 489 Query 33127 TATT---CCAATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATG 33183 | || |||||| || ||||| || | || | ||| || ||||||| ||||| | Sbjct 488 TGTTCTCCCAATCGTTCATATCAGAAGCCAAGTCTAATTCCTCTGCTGTCCAGAATGAAG 429 Query 33184 CCTCTGCCTTTTTATACATATTCCAGATGTCATGATATTGAATTGGAAAAATAACAAATC 33243 | ||||| || || ||||||| ||| ||||| || || || || || | ||| |||| Sbjct 428 CTTCTGCTTTCTTGTACATATCCCATATGTCTGTATGTTTGATAGGGAAGAGAACGAATC 369 Query 33244 TAT 33246 ||| Sbjct 368 TAT 366 >seq1043 Length=1979 Score = 156 bits (172), Expect = 5e-33 Identities = 385/571 (67%), Gaps = 15/571 (3%) Strand=Plus/Plus Query 32653 ACATCAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAA 32712 ||| |||||| || || |||||||| | ||||||||| | ||| || | ||||| || | Sbjct 208 ACAGCAAACAGGCAAAGTCGCAGTGCAAACCCTCGTCACGACTGATCAGCTCGTTCGAGA 267 Query 32713 ACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGAT-CCA 32771 ||| | ||| |||||| || ||||| || |||||||| || || ||| | | ||| Sbjct 268 ACGACAAGCCGTGCATTAAACCGCGCTTCTTGAGCCAAAAGATCGA-GCAGAAACTGCCA 326 Query 32772 GAAAAGAAAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCC--ATAACCG-GCG 32828 |||||| || || || || || |||||||| | | | ||| | || | || ||| Sbjct 327 CTAAAGAAGATACCCTCGACAGCGGCAAAGGCGACCAAACGCTCGGCGAATGAGCGAGCG 386 Query 32829 CTGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCT 32888 || || ||||| ||||| ||||| ||||| || || || || ||||| Sbjct 387 TTGG--TG-ATCCAGCGCAAGGCCCAGTCGGCTTTCTTCTTAACGGCGGGGATAGTCTCG 443 Query 32889 ATAGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCAATCAAAAGA 32948 || || | ||||| ||| || | | | | || | || || || || | |||| Sbjct 444 ATGGCGTGGAAGAGCATGTTCTTCTTCTCGGTGTTCTTGATGTAGGTGTCGATGAGAAGA 503 Query 32949 CTATACATTTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAGCATCTAGCC 33008 || || | || || || ||||| || ||||| ||||| ||||| ||||| || | ||| Sbjct 504 CTGTAGGTCTCAGAGTGGATGTTCTCGATGGCGATTTGGAATCCATAGAAACAACGTGCC 563 Query 33009 TCGGTAATCTGTACTTCTGTACAA-AATCGTTCTGCTAAATTTTCATTCACTATTCCGTC 33067 || | ||||| || || | ||| || ||| || | ||| || || || || ||||| Sbjct 564 TCTGGGATCTGCACCTCAG-ACATGAAGCGTGTGGCAAGATTCTCGTTGACAATGCCGTC 622 Query 33068 ACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTC-TGGTGTTAGTT 33126 || ||||| || |||| ||| || | ||||| | |||| | || | || | Sbjct 623 CGATGCGGCAAAGAAGGCCAGTACGTGAGTGATAAAGTGACGCTCGTTATCGT-TCAGCT 681 Query 33127 TATTC---CAATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATG 33183 | ||| ||||| | || || | | | ||| | ||||| ||||||| || |||| Sbjct 682 TGTTCTCCCAATCGTGAATGTCGCTTGCCAGATCGATCTCTTCGGCTGTCCAGAAAGATG 741 Query 33184 CCTCTGCCTTTTTATACATATTCCAGATGTC 33214 |||||||||| || ||||| ||||| ||||| Sbjct 742 CCTCTGCCTTCTTGTACATGTTCCAAATGTC 772 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 633408430869200