Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acytostelium_20leptosomum_20[genbank_20GCA_5F900092245.1_202017-01- 02] 28,227 sequences; 57,256,845 total letters Query= NC_009234.1 Length=35741 Score E Sequences producing significant alignments: (Bits) Value seq19415 136 9e-28 seq7329 132 1e-26 >seq19415 Length=1017 Score = 136 bits (150), Expect = 9e-28 Identities = 201/285 (71%), Gaps = 0/285 (0%) Strand=Plus/Minus Query 4117 CTACATCGCGATCGACACCACGGGCATGGGGCAAGGCGTCTACCAGCTCGTGCGCAAGTT 4176 |||||||| |||||| | ||| |||| ||| ||||| ||||| ||| |||| Sbjct 972 CTACATCGGGATCGATATCACCGGCACGGGTTCCGGCGTGGCGCAGCTGGTGAAGCAGTT 913 Query 4177 CTTCCCGGCCGCCGTCGCGCTGAACTACTCGCCCGAGGTGAAAACCCGCCTCGTGCTCAA 4236 ||||||| | | | || | | |||||| ||||| || ||||||||||| ||||| || Sbjct 912 CTTCCCGAACATCACCACGTTCAGCTACTCACCCGAAGTCAAAACCCGCCTGGTGCTGAA 853 Query 4237 GGGCCAGTCCGTCGTCCGGAACGGCCGCCTGCAATTCGACGCGGGCTGGACCGATCTGGC 4296 || | |||| || |||||| | ||| | ||||| ||||||||||| ||| |||| Sbjct 852 GGCTTACGACGTCATCAAAAACGGCAGGCTGGAGTTCGATGCGGGCTGGACGGATATGGC 793 Query 4297 GGCGGCGTTCATGGCGATCAAACAGACGATGACGGCGAGCGGCCGCCAGGCGACCTACAC 4356 | | | || ||||| ||| | || || || || ||| ||| | || ||||| Sbjct 792 GCAGTCATTGATGGCTATCCGCAAAACAATCACCGCCTCCGGGCGCATGTTCACTTACAC 733 Query 4357 CGCCGGCCGTACCGAGGAAACCGGCCACGCCGATCTGGCGTGGGC 4401 ||||| || || || || || ||||| ||||| || |||||||| Sbjct 732 GGCCGGTCGCACAGACGAGACGGGCCATGCCGACCTAGCGTGGGC 688 >seq7329 Length=1002 Score = 132 bits (146), Expect = 1e-26 Identities = 202/286 (71%), Gaps = 10/286 (3%) Strand=Plus/Plus Query 5230 GGGAAGAAGGACGGCATCCAGCTCATTCCCGTGTCCGAGGTCGCCGCGAAGGACGAGTTC 5289 || ||||| |||||||| |||||||| || ||| |||||| || || |||||||| ||| Sbjct 135 GGCAAGAAAGACGGCATTCAGCTCATCCCGGTGAGCGAGGTTGCGGCCAAGGACGAATTC 194 Query 5290 TTCAACATCAAGAACGTGACGCGCGACGATCTGCTCGCCGCGCACCGCGTGCCGCCGCAG 5349 | ||||| ||| | | || |||||||||||||| ||| ||| | || |||||| Sbjct 195 AGCTCGATCAAAAACATCAGCCGTGACGATCTGCTCGCGGCGTTGCGCATTCCACCGCAG 254 Query 5350 TTGCTCGGCATCGTGCCGAGCAATTCGGGCGGGTTCGGCAC---GCCGGATACCGCCGCG 5406 ||| | |||||||||||| || ||||||| || || | || ||| | || | | Sbjct 255 TTGATGGGCATCGTGCCGCAGAACGCGGGCGGTTTTGGGTCGTTGCGGGAGGCTGCTGAG 314 Query 5407 CGTGTGTTCGGGCG--CAACGAAATCAGGCCGCTACAGGCGCGCTTCGCCGAGCTGAACG 5464 ||| ||||| |||||| | |||| | |||||| | | ||| || | |||| Sbjct 315 -----GTTTGGGCGGTCAACGAGCTGGAGCCGTTGCAGGCGAGGCTGGCCCAGGTCAACG 369 Query 5465 ACTGGCTCGGCGACGAGGTCGTGACGTTCGACGATTACGAGATTCC 5510 | ||||| || || ||||| || | |||| | || | ||| |||| Sbjct 370 AGTGGCTGGGTGAAGAGGTTGTCAGGTTCAAGGAGTTTGAGCTTCC 415 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 114211304033922