Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acytostelium_20leptosomum_20[genbank_20GCA_5F900092245.1_202017-01- 02] 28,227 sequences; 57,256,845 total letters Query= NC_009382.1 Length=38760 Score E Sequences producing significant alignments: (Bits) Value seq7329 219 1e-52 seq19415 87.8 4e-13 >seq7329 Length=1002 Score = 219 bits (242), Expect = 1e-52 Identities = 289/396 (73%), Gaps = 6/396 (2%) Strand=Plus/Minus Query 2968 GAACCGCACCACCTCGTCACCGATCCAATCGTTGA--TTGCCAACAGGCGGTCCTGCAGG 3025 ||||| || ||||| ||||| | ||| ||||||| | | | ||| | |||||| Sbjct 398 GAACCTGACAACCTCTTCACCCAGCCACTCGTTGACCTGGGC--CAGCCTCGCCTGCAAC 341 Query 3026 GGCTTCACCTCGTTGCGCGCGAACACCATCGCCGCCTTCTCCA-CGTCGCCGAATCCGCC 3084 |||| || ||||||| ||| | ||| || |||| | || || | || || ||||| Sbjct 340 GGCTCCAGCTCGTTGACCGCCCAAACCTCAGCAGCCTCCCGCAACGAC-CCAAAACCGCC 282 Query 3085 GGTGTTGTTCGGAATGATGCCCATGAGCTGCGGCGGTACGCGGTGCGCGGCGAGCTGGTC 3144 | ||| | ||| | ||||||||| | |||||| || | ||| ||| |||||| | || Sbjct 281 CGCGTTCTGCGGCACGATGCCCATCAACTGCGGTGGAATGCGCAACGCCGCGAGCAGATC 222 Query 3145 GTCGCGCGTGACGTTCTTGATGTTCCAGAACTCGTCCTTCGCGGCCACCTCGGACACCGG 3204 ||| || ||| ||| ||||| | ||| |||||||| || || |||||| |||||| Sbjct 221 GTCACGGCTGATGTTTTTGATCGAGCTGAATTCGTCCTTGGCCGCAACCTCGCTCACCGG 162 Query 3205 TAGCAACTGGATCCCATCCTTCTTGCCATTGGGCGCGTACATGAACAGGTTGCGGAAATT 3264 | | ||| || || || |||||||| |||||||||| ||||||||||| || || Sbjct 161 GATGAGCTGAATGCCGTCTTTCTTGCCTGCCGGCGCGTACACAAACAGGTTGCGAAAGTT 102 Query 3265 GCCCGGCCCCTTGGCACTCTTCATCGCCTCGCGCAGCGTGTCGACGTCCTCCTGCTTCTG 3324 ||| ||||| || | |||||| || |||||| | ||||| |||||| | |||||| Sbjct 101 GCCTGGCCCTTTCGAGTTCTTCAGTGCGGTGCGCAGTGAGTCGATGTCCTCTTCCTTCTG 42 Query 3325 CGCCGCATCGGTCATGTACAGGATGAAGCCGGCGTG 3360 |||||| |||||||||||||| ||||| ||||| || Sbjct 41 CGCCGCGTCGGTCATGTACAGAATGAAACCGGCATG 6 >seq19415 Length=1017 Score = 87.8 bits (96), Expect = 4e-13 Identities = 138/192 (72%), Gaps = 8/192 (4%) Strand=Plus/Plus Query 4192 TCCGTCCAGCCGGCGTCGAACTCCAGCCTGCCCTTGCTGATCACGTCGTGCGCCTTGAGC 4251 ||||||||||| || ||||||||||||||||| || |||| ||||||| ||||| ||| Sbjct 799 TCCGTCCAGCCCGCATCGAACTCCAGCCTGCCGTTTTTGATGACGTCGTAAGCCTTCAGC 858 Query 4252 ACCAGGGCGGTTTTCACGTCCACGGAATAGGTGAAGCCTTCGGCA--TCCGGACGGAACT 4309 |||||| |||||| || || || ||| |||| | | | | | ||| ||||| Sbjct 859 ACCAGGCGGGTTTTGACTTCGGGTGAGTAGCTGAA--CGTGGTGATGTTCGGGAAGAACT 916 Query 4310 TCTGCACCAG--GCGGAACACCGCATCGCCGATGCCGGTCCGGTCGATGCCCACGTAGGC 4367 || |||||| ||| || ||| | | ||| ||||||| ||||| || | ||||| Sbjct 917 GCTTCACCAGCTGCGCCACGCCGGAAC-CCG-TGCCGGTGATATCGATCCCGATGTAGGT 974 Query 4368 GACGTCGTAGCG 4379 || |||||| Sbjct 975 CACCCAGTAGCG 986 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 123868865776028