Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acytostelium_20leptosomum_20[genbank_20GCA_5F900092245.1_202017-01- 02] 28,227 sequences; 57,256,845 total letters Query= NC_009603.1 Length=46365 Score E Sequences producing significant alignments: (Bits) Value seq23269 699 0.0 seq12529 688 0.0 seq19644 450 4e-122 seq13735 376 7e-100 seq9902 161 3e-35 seq177 136 1e-27 seq26972 114 4e-21 >seq23269 Length=715 Score = 699 bits (774), Expect = 0.0 Identities = 572/713 (80%), Gaps = 0/713 (0%) Strand=Plus/Plus Query 42386 GAGATGCCTGCAGCCCCGAGGTCCTGGATCGCCTCGACCAGCTCGTCGCGGTACAGCTCC 42445 |||||||| || || ||||||||||||||||||||||| |||||| ||||||||||||| Sbjct 1 GAGATGCCGGCGGCACCGAGGTCCTGGATCGCCTCGACGAGCTCGCCGCGGTACAGCTCG 60 Query 42446 AGGCAGCACTCGATGAGCACCTTCTCGGCGAAGGGGTNNNNNNNNNNNNNNNNNNNNNNN 42505 |||||||||||||||||||||||||||||||| |||| Sbjct 61 AGGCAGCACTCGATGAGCACCTTCTCGGCGAACGGGTCGCCCACCTGCACCGCGGGGCGC 120 Query 42506 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGAGGCGAGGATCGACGCGCCGCCGATCCCG 42565 || |||||||| |||||||||||| ||| Sbjct 121 TTGGTCGGGCCGGTCGAGTCGAAGGAGTCGGACGCGAGGATGCTCGCGCCGCCGATGCCG 180 Query 42566 TCACCCCCCGTGCGCGCCGCGAAGAGGACGACCTTGTTGCCTAGGCCCGTCGCGTTGGCG 42625 || || ||||||||||| |||| ||||||||||||||||| | ||| |||||||| ||| Sbjct 181 TCGCCACCCGTGCGCGCACCGAACAGGACGACCTTGTTGCCGACGCCGGTCGCGTTCGCG 240 Query 42626 AGCTTGAGGTCCTCGTGCCGGAGCACGCCCACCGCCAGGGCGTTGACCAGCGGATTGGCC 42685 ||||||||||| || || || |||||||||||||| |||||||| || ||||| |||||| Sbjct 241 AGCTTGAGGTCTTCATGACGCAGCACGCCCACCGCGAGGGCGTTCACGAGCGGGTTGGCC 300 Query 42686 TGATAGACGGCATCGAACACGGTCTCGCCGCCGATGTTCGGCAGACCGAGGCAGTTGCCG 42745 || |||||||| ||||| || |||||||||||||||||||| || || |||||||||||| Sbjct 301 TGGTAGACGGCGTCGAAGACCGTCTCGCCGCCGATGTTCGGGAGTCCCAGGCAGTTGCCG 360 Query 42746 TAGAAGCTGATGCCGCTGGTGACGCCGTGCACGACCCGCGCCGTGTCGGGGTCGTCGGCC 42805 |||||||||||||||||||| |||||||| ||||| || || |||||||||| |||| | Sbjct 361 TAGAAGCTGATGCCGCTGGTCACGCCGTGTACGACGCGGGCGGTGTCGGGGTGGTCGACT 420 Query 42806 GCGCCGAAGCGCAGGGCGTCCATGACCGCGACCGGGCGAGCGCCCATGGAGATGATGTCG 42865 || ||||||||||||||||||||||| ||||||||||| |||||||| |||||||||||| Sbjct 421 GCACCGAAGCGCAGGGCGTCCATGACTGCGACCGGGCGGGCGCCCATCGAGATGATGTCG 480 Query 42866 CGGACGATGCCGCCCACACCCGTCGCCGCGCCCTGGAAGGGCTCGATGAACGAGGGGTGG 42925 |||||||||||||| || || |||||||| ||||||||||||||||||||||| |||||| Sbjct 481 CGGACGATGCCGCCGACGCCGGTCGCCGCACCCTGGAAGGGCTCGATGAACGACGGGTGG 540 Query 42926 TTGTGACTCTCCGCCTTGAACGTGACCGCCCATCCCTCGCCGACGTCGATGACGCCCGCG 42985 ||||| ||| |||||||| ||||| ||||| |||||||||||||||| |||||||||| Sbjct 541 TTGTGCGACTCGGCCTTGAAGGTGACGGCCCAGCCCTCGCCGACGTCGACGACGCCCGCG 600 Query 42986 TTCTGCCCCATCCCGACCATGAGGCGCTCGCGCATCTCGTCCGAGACCTTCTGCCCGAAC 43045 ||||| ||||| || ||||| ||||| || ||||||||| ||||||||| ||||| Sbjct 601 TTCTGACCCATGCCCACCATCAGGCGTTCCTTCATCTCGTCGCTGACCTTCTGGCCGAAG 660 Query 43046 CTCTTGAGGTAGAGCTTGCTCGACTTGTAGGAGCAGTGCTCCGACCACATCAC 43098 | |||||| ||| ||||||||||||||||||||| |||||| || Sbjct 661 CGGCGCAGGTAGTTCTTCGACGACTTGTAGGAGCAGTGCTCGCTCCACATGAC 713 >seq12529 Length=681 Score = 688 bits (762), Expect = 0.0 Identities = 530/642 (83%), Gaps = 0/642 (0%) Strand=Plus/Plus Query 41257 CATCACGCCCTCGGCGAGGGCCTGCGCGAGGCNNNNNNNNNNNNNNNNNNNNNNACTGGA 41316 ||| |||||||||||||| ||||||||||||| ||| Sbjct 1 CATGACGCCCTCGGCGAGCGCCTGCGCGAGGCCTCCCTCGGAGAGGTCGTGCGCCGAGGA 60 Query 41317 GACCAGCCACTCGTCGCGTGCGGCGGCGATGAGACCGGCCAGGCGTTTCTCGGCGGCGAG 41376 || |||||| |||||||| || || | | |||||||| ||||| |||||| | ||||| Sbjct 61 GATCAGCCATTCGTCGCGGGCTGCCGACAGCAGACCGGCGAGGCGCTTCTCGCCCGCGAG 120 Query 41377 GTCGACGGNNNNNNNNNNNNNNNNGAGGTGGTCGTGCACGGTGTCGGCCCAGGCGGAGCC 41436 |||||| ||||| | ||||||| || ||||| || ||||| Sbjct 121 GTCGACCTTCGGGGGCAGACCGCCCAGGTGCTGGTGCACGACCTCTGCCCATGCCGAGCC 180 Query 41437 GGAAAGCTCCGTGGACGTCACGCCGAGCAGATAGATGTTCTGGCCCTCGTCCTGCCATCC 41496 ||| ||||| || || || ||||||||| ||||||||||||||||||||||||||||| Sbjct 181 GGAGAGCTCGGTCGAGGTGGTGCCGAGCAGGTAGATGTTCTGGCCCTCGTCCTGCCATCC 240 Query 41497 CGAGGGTATGCGGCGCGAGACGTCGTCGATGAGGCCGAGCACGCCCACGAGAGGAGTGGG 41556 ||||| ||||||||||||||||||||||||| |||||||||||| || || || || || Sbjct 241 GGAGGGGATGCGGCGCGAGACGTCGTCGATGATGCCGAGCACGCCGACCAGCGGGGTCGG 300 Query 41557 GTGGATCGGCACGTCGCCGGTCTGGTTGTAGAACGAGACGTTCCCGCCCGTGACCGGGGT 41616 |||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||| Sbjct 301 GTGGATCGGCACGTCGCCGGTCTGGTTGTAGAACGAGACGTTGCCGCCGGTGACCGGGGT 360 Query 41617 GCCCAGGGCGTAGCAGCCGTCGGCGAGCCCGTCCACCGTCTGACCGAACTGCCACATGAC 41676 |||||| |||||||||||||||| || ||||| |||||||| ||||||||||||||||| Sbjct 361 GCCCAGCTCGTAGCAGCCGTCGGCCAGGCCGTCGACCGTCTGGCCGAACTGCCACATGAC 420 Query 41677 CTCGGGATTCTCCGGGGAGCCGAAGTTCAGGCAGTCGGTGACCGCAGTGGGCACGGCGCC 41736 |||||| ||||| || ||||||||||||||||||||||||| ||| || ||||||||||| Sbjct 421 CTCGGGGTTCTCGGGAGAGCCGAAGTTCAGGCAGTCGGTGATCGCGGTCGGCACGGCGCC 480 Query 41737 GGTGACCGCGACGTTGCGGTAGGCCTCGGCGAGGGCGAGCTGTGCGCCCGCGTACGGGTC 41796 |||||| |||||||||||||| |||||||| ||||| ||||||||||||||||||||||| Sbjct 481 GGTGACGGCGACGTTGCGGTACGCCTCGGCCAGGGCCAGCTGTGCGCCCGCGTACGGGTC 540 Query 41797 GAGCTGGCAGTAGCGGCCGTTCGCGTCGGTCGCGATCGCGAACCCGAGGCCCGACTCCTC 41856 ||||||||||||||||||||| || ||||||| || |||||| ||||| ||||| ||||| Sbjct 541 GAGCTGGCAGTAGCGGCCGTTGGCATCGGTCGAGACCGCGAAGCCGAGACCCGATTCCTC 600 Query 41857 ATCGACGCGGATCATGCCGGCGTCGTCGGGGAAGCTGAGGGC 41898 |||||||||||||||||||||||||||||||| |||||| Sbjct 601 GTCGACGCGGATCATGCCGGCGTCGTCGGGGAACGAGAGGGC 642 >seq19644 Length=1527 Score = 450 bits (498), Expect = 4e-122 Identities = 323/371 (87%), Gaps = 1/371 (0%) Strand=Plus/Minus Query 10998 AAGTCCTGATGGCAGGGGAGACCGTGATCACGGTCGTGGGGAACCTCACTGCAGACCCTG 11057 ||||| | ||||| || || ||||| ||||| || ||||| |||||||| || ||||| | Sbjct 1217 AAGTC-TCATGGCCGGCGAAACCGTCATCACCGTGGTGGGAAACCTCACGGCCGACCCCG 1159 Query 11058 AGCTGCGTTACACGCAGAACGGGCTGCCGGTGGCGAACTTCACCATCGCATCGACGCCGC 11117 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct 1158 AGCTGCGCTACACGCAGAACGGGCTGCCGGTGGCGAACTTCACCATCGCATCGACGCCTC 1099 Query 11118 GCACCTTCGACCGTCAGGCGAACGAGTGGAAGGACGGCGAAGCGCTGTTCCTCCGTGCGT 11177 | | |||||||||| ||||| ||||||||||||||||| ||||||||||||||||| | Sbjct 1098 GGAACTTCGACCGTGCCGCGAATGAGTGGAAGGACGGCGATGCGCTGTTCCTCCGTGCAT 1039 Query 11178 CCGTGTGGCGCGAGTTCGCGGAGCACGTGGCGGGTTCGCTGACCAAGGGCATGCGGGTCA 11237 |||| |||||||||||||| |||||||||||||||||| |||| ||||||||||| |||| Sbjct 1038 CCGTCTGGCGCGAGTTCGCCGAGCACGTGGCGGGTTCGTTGACGAAGGGCATGCGCGTCA 979 Query 11238 TCGCATCCGGACGCCTGAAGCAGCGCTCCTACCAGGACCGCGAGGGCAACAACCGCACCG 11297 |||| || || ||| |||||||||||||||||||||||||||||| | ||||||| Sbjct 978 TCGCGCAGGGCCGTCTGCGTCAGCGCTCCTACCAGGACCGCGAGGGCAACCAGCGCACCG 919 Query 11298 CGATCGAGCTCGAGGTGGACGAGATCGGCCCGAGCCTCCGCTACGCGACGGCGCAGGTCA 11357 |||||||||| ||||| |||||||||||||| ||||| |||||||| |||||||||| Sbjct 918 CGATCGAGCTGGAGGTCGACGAGATCGGCCCCTCGCTCCGGTACGCGACCGCGCAGGTCA 859 Query 11358 CCCGGGCCGCC 11368 |||| || ||| Sbjct 858 CCCGTGCGGCC 848 >seq13735 Length=476 Score = 376 bits (416), Expect = 7e-100 Identities = 294/349 (84%), Gaps = 4/349 (1%) Strand=Plus/Minus Query 40936 GACCGTCGCTCATGCGGGCACCTGCTCGGTCACCGTCGGCCCGAACAGGGCCGGCAGCGT 40995 |||| ||||||||||| |||||||| || || ||||| ||||| | ||| || || Sbjct 348 GACC-TCGCTCATGCGCTGACCTGCTCCGTGACGGTCGGGCCGAAGTACGACGGGAGGGT 290 Query 40996 GGCACGCGAGGTCTCGCGCAGCTCGGCGGCGGAGACGGTGAAGACGTCCTGCACCTCGAG 41055 ||| ||||| ||| |||||||||||||| | |||||||||||| ||||||||||||| Sbjct 289 GGCCTGCGAGCGCTCACGCAGCTCGGCGGCCGTCACGGTGAAGACGCCCTGCACCTCGAG 230 Query 41056 CGTCGG---CTCGCTGTCGGTCACGCCGATCCGCAGCACCGGATAGCCGCGCCCCTCGCA 41112 | ||| ||||||||||||||||||||| |||| |||||| ||| |||| || ||||| Sbjct 229 CTTCGCGCCCTCGCTGTCGGTCACGCCGATGCGCATCACCGGGTAGTCGCGTCCTTCGCA 170 Query 41113 GAGGCCGCGGAACTTCACGTCGTCCTCGCGGGGGACGGTGACGATCACGCGCCCTGTCGA 41172 ||||||||||||||||||||| ||||| ||||| ||||| ||||||||||| || ||||| Sbjct 169 GAGGCCGCGGAACTTCACGTCATCCTCACGGGGCACGGTCACGATCACGCGACCGGTCGA 110 Query 41173 CTCCGAGAAGAGGGCGGTCGCGGCGTCCACGCCGTCGCGCTCCATGAGCTCGGTGAGCCA 41232 ||| ||||| |||||||| ||||||||||| ||||||||||| |||| |||| | | ||| Sbjct 109 CTCGGAGAACAGGGCGGTTGCGGCGTCCACTCCGTCGCGCTCGATGATCTCGTTCAACCA 50 Query 41233 CACGCGCGCGCCGACGCCGAAGCGCATCACGCCCTCGGCGAGGGCCTGC 41281 ||||| || ||||||||||||||||| |||||||||||||| |||||| Sbjct 49 GACGCGAGCTCCGACGCCGAAGCGCATGACGCCCTCGGCGAGCGCCTGC 1 >seq9902 Length=491 Score = 161 bits (178), Expect = 3e-35 Identities = 270/378 (71%), Gaps = 18/378 (5%) Strand=Plus/Minus Query 43641 AGCGCTCGGTATCCGCCTTTGGCTTCCGCGGCTGCCAG--CTCCGATCGACAGGAGAACG 43698 |||| | || | | ||||| ||||| | | ||| | || ||||||||| |||||||| Sbjct 371 AGCGTTGGGCAGCTGCCTTGGGCTTTCACAGCT-CAAGGGCTCCGATCGTCAGGAGAAGA 313 Query 43699 TCATCTCGCTCACCGTG--CAGACCTCCACCGGCA-CTCTTGGACCTGTCAGGCAGACGT 43755 ||||||| |||| | | ||| | ||||| | || || || | | ||||| | Sbjct 312 TCATCTCCATCACACAGATCGAACCGACCGCGGCAACGCTGGGTCCGATTCGTCAGACAT 253 Query 43756 ATGCCGGCACCGGCGATTTCCCGCCTATGGCGAAGTCATACACCCGGCTTTCGCAGGTGG 43815 || |||||| || || ||||| || ||||||||| | |||| | | |||||||||| | Sbjct 252 ATTCCGGCAACGCGGACTTCCCTCCCATGGCGAAGGCGTACAAGCAGGTTTCGCAGGTCG 193 Query 43816 TGCGGGAAACAGGCCTCCTGAATCGCGCACCC-GTC-TTCTATGTCCTCGTGGCC---GG 43870 | ||| || || || || | |||||||| || ||||| || |||||||| || Sbjct 192 TCAAGGAGACCGGGCTGCTTCA--GCGCACCCAGTGGTTCTACATCTTCGTGGCCACCGG 135 Query 43871 TGCCCTGGCTCTCG-GCTTCGCGGTATGCATCACGGGCTTCCTCCTGTTGGGCGACAGCT 43929 || | ||| | | ||| |||| | |||||| |||||| ||||| | || ||||||| Sbjct 134 TGTC---GCTGTGGCGCTCGGCGGCCT-CATCACCGGCTTCATCCTGCTCGGTGACAGCT 79 Query 43930 GGTTCCAGCTCCTTATCGCCGCCGCTCTCGGCATCCTGTTCACCCAGGTGGCTTTCCTCG 43989 |||||||| | || |||||||| | ||||||||| | |||| ||| | || ||||||| Sbjct 78 GGTTCCAGTTGCTCATCGCCGCGGGCCTCGGCATCGTCCTCACGCAGATCGCGTTCCTCG 19 Query 43990 CGCACGAGGCGGCACACC 44007 ||||| || || |||| Sbjct 18 GCCACGAAGCCGCCCACC 1 >seq177 Length=203703 Score = 136 bits (150), Expect = 1e-27 Identities = 142/185 (77%), Gaps = 6/185 (3%) Strand=Plus/Plus Query 42806 GCGCCGAAGCGCAGGGCGTCCATGACCGCGACCGGGCGAGCGCCCATGGAGATGATGTCG 42865 ||||||||||||||||||| |||| |||||| ||| || || ||||||| || | ||| Sbjct 124238 GCGCCGAAGCGCAGGGCGTTCATGGCCGCGATCGGCCGGGCACCCATGGTGAACACATCG 124297 Query 42866 CGGACGATGCCGCCCACACCCGTCGCCGCGCCCTGGAAGGGCTCGATGAACGAGGGGTGG 42925 || | ||| ||||| ||||| |||||||| ||||| |||||||||| | || |||||| Sbjct 124298 CGCAGGATACCGCCGACACCGGTCGCCGCACCCTGATAGGGCTCGATATAGGACGGGTGG 124357 Query 42926 TTGTGACTCTCCGCCTTGAACGTGACCGCCCA---TCCCTCGCCGACGTCGATGACGCCC 42982 ||||| |||||| |||||| ||| | || || ||||||| |||| || || Sbjct 124358 TTGTGGCTCTCCATCTTGAA---GACAACGCAGTCGCCATCGCCGATATCGACAACACCG 124414 Query 42983 GCGTT 42987 ||||| Sbjct 124415 GCGTT 124419 >seq26972 Length=384 Score = 114 bits (126), Expect = 4e-21 Identities = 146/201 (73%), Gaps = 0/201 (0%) Strand=Plus/Minus Query 41741 ACCGCGACGTTGCGGTAGGCCTCGGCGAGGGCGAGCTGTGCGCCCGCGTACGGGTCGAGC 41800 || || ||||||||| | |||||||| | |||||||| || || | ||||||||||||| Sbjct 384 ACTGCCACGTTGCGGAAAGCCTCGGCCAACGCGAGCTGCGCACCGGTGTACGGGTCGAGC 325 Query 41801 TGGCAGTAGCGGCCGTTCGCGTCGGTCGCGATCGCGAACCCGAGGCCCGACTCCTCATCG 41860 | ||||||||| |||||||| | | |||| |||| | || | || ||| ||| Sbjct 324 GCGGTGTAGCGGCCCGAAGCGTCGGTGGACAGTGCGATCCCGCGTCCGGTCTTCTCGTCG 265 Query 41861 ACGCGGATCATGCCGGCGTCGTCGGGGAAGCTGAGGGCCGTGTTGCCGAGCACGTAGTAG 41920 | |||||| | ||| ||||| || | ||| | ||||| ||| | |||||| | Sbjct 264 ATGCGGATGACACCGCCGTCGGCGTTCTCGGCCAGGACAGTGTTTCCGCGGACGTAGCGG 205 Query 41921 TCGTACTGGTTCGTGATCCAC 41941 |||||||| | ||||||||| Sbjct 204 TCGTACTGCTCGGTGATCCAC 184 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 148196708455298