Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acytostelium_20leptosomum_20[genbank_20GCA_5F900092245.1_202017-01- 02] 28,227 sequences; 57,256,845 total letters Query= NC_009816.1 Length=70579 Score E Sequences producing significant alignments: (Bits) Value seq13604 264 5e-66 seq2422 192 3e-44 >seq13604 Length=1214 Score = 264 bits (292), Expect = 5e-66 Identities = 457/654 (70%), Gaps = 24/654 (4%) Strand=Plus/Minus Query 59910 TCATCGAACATAAGGTAAGGATAGCCAGACTCAAACTGAACCTCTGCGATGGTCTGGAAC 59969 || |||||||| | ||| || ||||| ||||| ||||| | ||| |||| ||||||||| Sbjct 671 TCTTCGAACATGACGTACGGGTAGCCGGACTCGAACTGGATCTCGGCGACGGTCTGGAAG 612 Query 59970 AGCTTTCGAGCGTCGATAAAGGTCTTAGCGATCCTATCATCTTTTAGCCACGTGTCGTAC 60029 | || || |||| ||| |||||| ||| | || | | | | | |||| Sbjct 611 AACTCGCGCGCGTTGATCTTGGTCTTCTTGATGCGCGGGTCGTCGACCATCTCGCGGTAC 552 Query 60030 ATCTCGGTTACGGAGAACTCG--GACAGTGACTTTCCGTACACCTTATTGATGTCATAAG 60087 ||||||| || |||| ||| || | || ||||| ||||| | || ||| || | Sbjct 551 TTCTCGGTGACCGAGATGTCGCCGAACGGAACG--CCGTAGACCTTCTCGACGTCGTACG 494 Query 60088 GAGAGAATAGGGCCATAGGCTCGCTCTCCTTGGCAAGGCGGAACGTGACATCAGGAACGA 60147 | ||||| ||| ||| |||| | |||||| || |||||||| || ||||| | Sbjct 493 GCGAGAACAGGTACATGTCCTCGTCGTTCTTGGCGAGTTCGAACGTGATGTCCGGAACCA 434 Query 60148 TAACTCCTAGGGAGAGAGTCTTAATACGGATCTTCTCGTCGGCGTTTTCACGCTTGGTAT 60207 || || || || || ||||| || ||||||||||| |||||||| || |||||||| | Sbjct 433 CGACGCCCAGCGACAGCGTCTTGATGCGGATCTTCTCATCGGCGTTCTCGCGCTTGGTGT 374 Query 60208 CCAGGAA-CGCAAGGATGTCGGGGTGGTGTGCGTTCAAATATACCGCCCCTGCGCCCTGC 60266 | ||||| |||| | |||||||||||||| ||||| | || ||||| || |||||||| Sbjct 373 CGAGGAAGCGCATG-ATGTCGGGGTGGTGGGCGTTGAGGTACACCGCACCGGCGCCCTGA 315 Query 60267 CTTGCACCCAGTTGGTTAGAGTAGGAGAAGCTATCTTCTAGAATCTTCATCACAGGGATG 60326 | ||||| || ||||| | |||| |||||| ||||| || | ||||||||| |||||| Sbjct 314 CGCGCACCGAGCTGGTTGGCGTAGCTGAAGCTGTCTTCGAGGAGCTTCATCACGGGGATG 255 Query 60327 ACTCCAGAGGCCTGACCTTCTCGACC--CTTAATCGGAGCTCCTGCCTCGCGGAGGTTGG 60384 | || |||| ||| ||||||| | ||| ||||| || || | |||||||| ||| | Sbjct 254 ATGCCGGAGGACTG--GTTCTCGATCTGCTTGATCGGCGCACCCGACTCGCGGATGTTCG 197 Query 60385 AGAATCCAATGCCGACTCCGCCACCACGCTTAGACAGCTGGAG---AGAGTCCTGAACGA 60441 | | | | |||| ||||| || ||||| || ||||| || |||| || | | Sbjct 196 ACAGCAGCAGGGCGACGCCGCCGCCGCGCTTGGAGAGCTGCAGGGCCGAGT--TG-ATGC 140 Query 60442 TTCGACCGATGGACCCCATGGTGTCCTGAACATCGAGGATGAAGCATGATACTGGCTTGC 60501 || |||| ||| ||||| |||| | | || | |||||| || | | || Sbjct 139 CGCGGGCGATCGACTCCATGTTGTCTTCGATGCGCAGCAGGAAGCAGCTGACGAGTTCGC 80 Query 60502 ----CTGCGTCGAGAAGCCCCGCGTTGAGGAAGGTCGGAGTTGCAGGCTGGAAG 60551 ||||| | | || ||||||||||| ||||| || || ||||||||| Sbjct 79 CGCGCTGCGCCTTG----CCGGCGTTGAGGAATGTCGGGGTGGCCGGCTGGAAG 30 >seq2422 Length=24180 Score = 192 bits (212), Expect = 3e-44 Identities = 452/671 (67%), Gaps = 16/671 (2%) Strand=Plus/Minus Query 59889 GGATTGCCTCGGTTAGCTGCATCATCGAACATAAGGTAAGGATAGCCAGACTCAAACTGA 59948 ||| || | ||||| | | || || ||||| | ||| || ||||| || |||||||| Sbjct 6772 GGACTGGCGCGGTTCACGGTGTCTTCAAACATGATGTACGGGTAGCCGGATTCAAACTGG 6713 Query 59949 ACCTCTGCGATGGTCTGGAACAGCTTTCGAGCGTCGATAAAGGTCTTAGCGATCCTATCA 60008 | ||| || | | ||||||||| | || ||| ||| || ||| || || || Sbjct 6712 ATCTCCGCCAGGCGCTGGAACAGGTCGCGGGCGCGGATCCAGCGCTTGCGGACCCGCTCG 6653 Query 60009 TCTTTTAGCCACGTGTCG-TACATCTCGGTTACGGAGAACTCGGACAGTGACTTTCCGTA 60067 || | ||| || | || | ||| | || | | |||| | | || ||||| Sbjct 6652 TCGGCCA-CCAGCTGCGGATAGAGGTCGCCGATGGCGCAATCGGCGAAAGGTTTGCCGTA 6594 Query 60068 CACCTTATTGATGTCATAAGGAGAGAATAGGGCCATAGGCTCGCTCTCCTTGGCAAGGCG 60127 || | | || ||||||||| ||||| |||||||| || | || || || || | Sbjct 6593 CAGCCGTTCGACGTCATAAGGCGAGAACAGGGCCATCTGCGCATCTTCTTTCGCCAGCTG 6534 Query 60128 GAACGTGACATCAGGAACGATAACTCCTAGGGAGAGAGTCTTAATACGGATCTTCTCGTC 60187 ||| |||| |||||| | | || || || || | || || || ||||| ||||| || Sbjct 6533 GAAGGTGATATCAGGGATCACCACCCCCAGCGACAAGGTTTTGATGCGGATTTTCTCATC 6474 Query 60188 GGCGTTTTCACGCTTGGTATCCAGGAA-CGCAAGGATGTCGGGGTGGTGTGCGTTCAAAT 60246 ||| ||||||||| |||||| || || || || || ||||| ||||| | | || Sbjct 6473 GGCATTTTCACGCCGGGTATCAAGAAAGCGTAAA-ATATCGGGATGGTGAACATGCAGCC 6415 Query 60247 ATACCGCCCCTGCGCCCTGCCTTGCACCCAGTTGGTTAGAGTAGGAGAAGCTATCTTCTA 60306 | ||||| || || ||||| | || || || || || | ||||||||| || || | Sbjct 6414 AGACCGCACCCGCCCCCTGGCGGGCGCCGAGCTGATTGGCATAGGAGAAGGCGTCCTCCA 6355 Query 60307 GAATCTTCATCACAGGGATGACTCCAGAGGCCTGACCTTCTCGA--CCCTTAATCGGAGC 60364 | ||||||||||| || | || ||||| | ||| || |||| | ||| ||||| || Sbjct 6354 GCATCTTCATCACCGGCACCACCCCAGAAGACTG--GTTTTCGATGCGCTTGATCGGCGC 6297 Query 60365 TCCTGCCTCGCGGAGGTTGGAGAATCCAATGCCGACTCCGCCACCACGCTTAGACAGCTG 60424 || |||||||| |||||||||| | || | | || ||||| || ||||| |||||||| Sbjct 6296 CCCGGCCTCGCGCAGGTTGGAGAGTAAAAAGGCCACCCCGCCGCCGCGCTTCGACAGCTG 6237 Query 60425 GAG---AGAGTCCTGAACGATTCGACCGATGGACCCCATGGTGTCCTGAACATCGAGGAT 60481 || |||| | || || ||||||||| |||| | |||| || | || | Sbjct 6236 TAGCGCCGAGTTC---ACCGCCCGGCCGATGGACTCCATATTATCCTCAATACGCAGCAG 6180 Query 60482 GAAGCATGATACTGGCTTGCCTGCG-TCGAGAAGCCCCGCGTTGAGGAAGGTCGGAGTTG 60540 |||||| || | || | || ||| | | || ||||| ||||||||||| || | Sbjct 6179 GAAGCAGGAGATCAGC-TCCCCGCGCTGCTGTTTGCCAGCGTTAAGGAAGGTCGGTGTGG 6121 Query 60541 CAGGCTGGAAG 60551 | ||||| ||| Sbjct 6120 CGGGCTGAAAG 6110 Score = 96.9 bits (106), Expect = 2e-15 Identities = 266/403 (66%), Gaps = 10/403 (2%) Strand=Plus/Minus Query 58392 TACAAAGCGCAGCTTAGGCAACCTTCCACTTCCGTGCCTTCTACCGACT--TAGCAGAGG 58449 |||| |||||| | ||| ||||| | ||| |||||||| | || | | || || Sbjct 7788 TACAGCGCGCAGGACACGCAGCCTTCAATTTCAGTGCCTTCCAGCGCCAGCTGGCGCAGA 7729 Query 58450 TTCGGATGTAGTACAGAGACTTCAGGCCCTTCTTGTGAGCGTAGATCTGCGCTCGGTTAA 58509 ||||||||||| || | ||| | ||| ||||| ||||| || ||||| ||| | Sbjct 7728 --CGGATGTAGTAGAGCGTCTTGATGCCTTTCTTCCAGGCGTAAATTTGCGCCTTGTTGA 7671 Query 58510 TGTCTCGCGTTGTCGCTGTATCTGGGAAGAACAGCGTGAGAGACATGCCCTGGTCTACCC 58569 | || || || || || ||||| ||||||||||| || || |||| |||||||| || Sbjct 7670 TATCGCGGGTGGTGGCGGTATCGGGGAAGAACAGGGTCAGCGACAGCCCCTGGTCGACGT 7611 Query 58570 AAGGAGATGCTACAGCGTACATATCAATGATCGGGTTAGGTCCGATAGCGTAAGCGCTAT 58629 | | || | ||||| | ||||||||| | || || || | || || || Sbjct 7610 GGCGCGTCGCCTCGGCGTAAGTGTCAATGATCTTCTCCGGCCCTATCTCATACGC---AT 7554 Query 58630 C--AATTGA-TTCTACATTCTCATTGGTCACTCCGTACTGAGGGTAATAGACTCGACCAA 58686 | | || | | ||| || || ||| | ||||| || || || || Sbjct 7553 CCTGGTAGAGGGCCAGATTGTCGTTATTCATAAATGGCGCGGGGTAGTACACCCGCCCGG 7494 Query 58687 GCTTACCCTCCTTGCGAACCTCAACAGGAGAGGTCACAGGGTGAATCGAGGCCGTGGCAT 58746 || ||||| ||||| | ||||| ||| | |||||||| || ||||||| Sbjct 7493 TTTTCCCCTCTTTGCGGATCTCAATCTTCGAGACGATCGGGTGAATGCTGGAGGTGGCAT 7434 Query 58747 GGTTAATGTACGAGATAGAGCCGGTTGGTGGGATCGCCTGGAG 58789 |||| ||||||||||| |||||||| || || | |||||| || Sbjct 7433 GGTTGATGTACGAGATCGAGCCGGTGGGCGGCACCGCCTGCAG 7391 Score = 91.5 bits (100), Expect = 7e-14 Identities = 115/158 (73%), Gaps = 0/158 (0%) Strand=Plus/Minus Query 57370 CTCCATTACCTTCTGGAATTTATATCCCAAGTAATAGCCATGCACACCCTCGTCTCTCAT 57429 ||||| | | |||||| | || || || | ||||||||||||||| | || || | || Sbjct 8426 CTCCAGTCCTTTCTGGTACTTGTAGCCGATGTAATAGCCATGCACCGCTTCATCGCGAAT 8367 Query 57430 GATAAGGCGGATAAGGTCCGCTGTGTTGGTGAGTTTACCTTGAGAGGCGAAGTGAAGAGG 57489 ||| |||||||| || ||||| |||||||| || || || | || ||||| | || Sbjct 8366 GATCAGGCGGATCAGATCCGCAGTGTTGGTCAGCTTTCCCCGGCTGGAGAAGTACATCGG 8307 Query 57490 GAGATAGAAGCCGGTATAGAACAAGAATGATTCCAGGA 57527 || ||||||||| ||||| | || ||||| |||| Sbjct 8306 CAGCCAGAAGCCGGAGTAGAAGAGAAAGGATTCGAGGA 8269 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 225650345829380