Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acytostelium_20leptosomum_20[genbank_20GCA_5F900092245.1_202017-01- 02] 28,227 sequences; 57,256,845 total letters Query= NC_010105.1 Length=170523 Score E Sequences producing significant alignments: (Bits) Value seq3869 134 2e-26 >seq3869 Length=8584 Score = 134 bits (148), Expect = 2e-26 Identities = 278/414 (67%), Gaps = 0/414 (0%) Strand=Plus/Plus Query 141924 CATCAGGTCGTTTAACTGGATTCCGTAGTCCATATGACGAATACGGTTCTCATCGACACC 141983 |||||| | ||| | ||| | ||||||||||| ||||||| ||||| | ||| ||| Sbjct 4353 CATCAGCTTGTTGATCTGTACCCCGTAGTCCATGTGACGAACGCGGTTGGCGTCGGTACC 4412 Query 141984 TTTGTTGTTTTTCAAAACGAGCAGATTTTCAACTTCCAAATGCCAAATAGGATAATAAGC 142043 ||||||||||| || ||||| |||| ||||||| |||||| || || || | Sbjct 4413 ACGGTTGTTTTTCAGCACCAGCAGGCTTTCCACTTCCAGATGCCACATTGGGTAGAAGAG 4472 Query 142044 AGTAGCAGCGCCGCCACGGATTCCACCTTGTGAACATGATTTAACAGCAGTCTGGAAATG 142103 || || |||||||| || | || || || || || ||||| || || ||||||||||| Sbjct 4473 GGTTGCCGCGCCGCCGCGCACGCCGCCCTGCGAGCAGGATTTCACCGCGGTCTGGAAATG 4532 Query 142104 TTTCCAGAATGGAATAACACCGGTATGTTTGACTTCACCCATGCCAATACGAGAACCTTC 142163 || |||| ||||| ||||| || | |||| || || || | || Sbjct 4533 CTTGTAGAACGGAATGCAGCCGGTGTGGAAGGCTTCGCCGCCGCGGATCGGGCTGCCCAG 4592 Query 142164 AGCACGAATCATACCAACGTTGATACCAATACCTGCACGTTTAGAAATGTATTCAATTAT 142223 || ||||| || ||||||| || || || || || | |||| ||||| | || Sbjct 4593 CGCGCGAATGCGCCCGGCGTTGATGCCGATGCCGGCGCGCTGGGAAACGTATTTCACAAT 4652 Query 142224 TGAGTTGGCAGTTTTGTTAATAGATTTCAGCGAGTCGCCTGCTTCAATAACCACACAAGA 142283 | | ||| || ||| || || | ||| |||||| || || | ||| || || Sbjct 4653 CGCGCTGGAGGTGGCGTTGATGGAATCCAGGCTGTCGCCGCACTCGATCAGCACGCAGGA 4712 Query 142284 ACTAAATTGACGAGTTGGAGTACGTGCACCAGCCATAATAGGAGTAGGCAACGA 142337 || || ||||| ||||| ||||| | || | ||| || || || |||| ||| Sbjct 4713 GCTGAACTGACGGGTTGGGGTACGCACGCCGGACATGATCGGCGTCGGCAGCGA 4766 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 545353111054360