Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acytostelium_20leptosomum_20[genbank_20GCA_5F900092245.1_202017-01- 02] 28,227 sequences; 57,256,845 total letters Query= NC_010106.1 Length=52975 Score E Sequences producing significant alignments: (Bits) Value seq3869 416 1e-111 >seq3869 Length=8584 Score = 416 bits (460), Expect = 1e-111 Identities = 758/1106 (69%), Gaps = 14/1106 (1%) Strand=Plus/Minus Query 51856 AATGGCTTACACTACCTTTTCACAAACCAAGAATAACCAATTACTAGAGCCAATGTTCTT 51915 |||||| ||||| || |||||||| || || || | || | || || || ||||| || Sbjct 2995 AATGGCATACACCACTTTTTCACAGACGAAAAACGATCAGCTGCTGGAACCTATGTTTTT 2936 Query 51916 TGGTCAGAACGTTAACGTTGCTCGATATGACCAACAGAAGTACGGCATATTCGAGAAGTT 51975 ||| ||| |||||||| || || || || || || || |||| ||| || || ||| | Sbjct 2935 TGGCCAGCCGGTTAACGTGGCCCGCTACGATCAGCAAAAATACGACATCTTTGAAAAGCT 2876 Query 51976 AATTGAGAAACAATTGTCATTCTTCTGGCGACCGGAAGAGGTAGACGTTTCCCAGGACCG 52035 ||||| || || | || ||||||||||| ||||||||||| |||||||||| || || Sbjct 2875 GATTGAAAAGCAGCTCTCCTTCTTCTGGCGCCCGGAAGAGGTTGACGTTTCCCGCGATCG 2816 Query 52036 TATTGATTATCAGAAGCTACCTGCAAACGAACAACACATTTTCACCAGTAATCTTCGTTA 52095 || || || ||| ||| || | | | ||| |||| ||||||| ||| || || || Sbjct 2815 CATCGACTACCAGGCGCTGCCGGAACATGAAAAACATATTTTCATCAGCAACCTGAAGTA 2756 Query 52096 TCAGATTCTTCTTGACTCAATTCAGGGACGTGGGCCCAACACAGTTTTGCTTCCAATCGT 52155 |||| || || ||||| || ||||| ||| | || || | ||||| || | | Sbjct 2755 CCAGACGCTGCTCGACTCCATCCAGGGCCGTAGCCCGAATGTGGCGTTGCTGCCGCTGAT 2696 Query 52156 GAGCATTCCTGAATTGGAGACGTGGATTGAAACCTGGTCTTTCTCCGAGACTATTCATTC 52215 ||| || || ||||||| ||| | ||||||||| | ||||||||||| ||||| || Sbjct 2695 CTCCATCCCGGAGCTGGAGACCTGGGTAGAAACCTGGGCCTTCTCCGAGACCATTCACTC 2636 Query 52216 ACGTTCTTATACCCACATCATTCGTAATATTGTTACAGACCCAAGCATTATCTTTGATGA 52275 ||||| || || |||||||| || || || || | ||||| | | || || || Sbjct 2635 GCGTTCGTACACTCACATCATCCGCAACATCGTCAACGACCCGGCGACCGTGTTCGACGA 2576 Query 52276 AATCGTAACTAACGAACACATCAAGGCACGAGCAATTGGCATCTCCCAATATTATGACGA 52335 ||||| || ||||| || ||| || ||| || |||||||| || ||||| || Sbjct 2575 CATCGTCACCAACGAGCAGATCCAGAAACGTGCGGAAGGCATCTCTCACTATTACGATTC 2516 Query 52336 ACTCCAGCAACTCACTGCATTATGGCAGTTGTTCGGAGAAGGGAGCCATGCTG-----GT 52390 || || | || | ||||| || | || ||||| | ||| | | | Sbjct 2515 GCTGATCGAAATGACCAGCTACTGGCATCTGCTGGGCGAAGGCACCCACACCGTCAACGG 2456 Query 52391 CA------TGA-AATTAGTCTGCGTGAGTTGAAGAAGAAGCTGTATTTATGCCTCATGTC 52443 || ||| | | |||||| ||| |||| ||||| || ||| | ||||| ||| Sbjct 2455 CAAAACCGTGACCGTGAATCTGCGCGAGCTGAAAAAGAAACTCTATCTGTGCCTGATGAG 2396 Query 52444 TATCAATGCATTGGAAGCAATTCGCTTCTATGTCAGCTTTGCTTGCTCATTTGCCTTCGC 52503 | ||||| ||||||| || |||||||| |||||||| || ||||| || ||||| || Sbjct 2395 CGTTAATGCCCTGGAAGCGATCCGCTTCTACGTCAGCTTCGCCTGCTCCTTCGCCTTTGC 2336 Query 52504 AGAACGTAAGTTAATGGAAGGAAATGCCAAGATTATTCGCTTAATTGCACGAGATGAAGC 52563 ||||| || | |||||||| || ||||| ||||| ||| | || || || |||||||| Sbjct 2335 CGAACGCAAACTGATGGAAGGCAACGCCAAAATTATCCGCCTGATCGCCCGCGATGAAGC 2276 Query 52564 ACTTCATTTGACAGGAACTCAGCACATGCTGAACCTTCTTGCAAGTGGAAAAGATGACCC 52623 || || |||| || || ||||| ||||||||||| || || | || || || Sbjct 2275 GCTGCACCTGACCGGCACCCAGCATATGCTGAACCTGCTGCGCTCCGGCAGCGACGATCC 2216 Query 52624 AGAAATGGGTGAAATTGCTGCTGAATGCCGCCAAGAATGCCAGAAATTGTTCGAAGATGC 52683 ||||||| ||||| || | || ||| || || ||| | | |||||| || Sbjct 2215 GGAAATGGCGGAAATCGCCGAAGAGTGCAAGCAGGAGTGCTATGACCTGTTCGTGCTGGC 2156 Query 52684 TGCTCAACAAGAGAAGGATTGGGCCGATTATTTGTTCAAAGATGGCTCTATGATTGGCTT 52743 || || || ||||| || ||||| || || ||||| || ||||| ||||| ||| | Sbjct 2155 GGCGCAGCAGGAGAAAGAGTGGGCGGACTACCTGTTCCGCGACGGCTCGATGATCGGCCT 2096 Query 52744 AAACAAGCAAATTCTATGCGGATATGTGGAATATATCACGAATATTCGTATGCAAGCAGT 52803 || || | ||||| ||| || || || || ||||| ||||| || ||||| || || Sbjct 2095 GAATAAAGATATTCTCTGCCAGTACGTCGAGTACATCACCAATATCCGCATGCAGGCGGT 2036 Query 52804 TGGATTAGATGCTCCATT-CAAAGGTGCAACTAACCCGATTCCGTGGATTAATGCATGGT 52862 || | ||| || || || | || | |||||||| || ||||| || | ||| Sbjct 2035 GGGCCTCGATCTGCCGTTCCAGACCCGC-TCCAACCCGATCCCATGGATCAACACCTGGC 1977 Query 52863 TGAATTCGGATGCTGTACAGGTTGCTCCACAGGAAACGGAGATTAGTTCCTACCTGGTCG 52922 || || || || ||||| || || |||||| ||| | ||||| || || |||| Sbjct 1976 TGGTCTCCGACAACGTTCAGGTGGCGCCGCAGGAAGTGGAAGTCAGTTCTTATCTCGTCG 1917 Query 52923 GGCAAATTGACTCCGAAGTTGATACC 52948 | || || || || ||||| ||| || Sbjct 1916 GCCAGATCGATTCTGAAGTCGATGCC 1891 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 169341618397438