Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acytostelium_20leptosomum_20[genbank_20GCA_5F900092245.1_202017-01- 02] 28,227 sequences; 57,256,845 total letters Query= NC_010116.1 Length=58663 Score E Sequences producing significant alignments: (Bits) Value seq345 98.7 4e-16 >seq345 Length=175672 Score = 98.7 bits (108), Expect = 4e-16 Identities = 143/200 (72%), Gaps = 3/200 (2%) Strand=Plus/Plus Query 4998 AGGCCGCGCTGCTCGTGGTGGATGAGTATTCCATGATTGACGAACAGATGGGGGAGGACT 5057 ||||| |||| |||| || || |||| || ||| | ||||||||| | || || Sbjct 165531 AGGCCAAGCTGATCGTCGTCGACGAGTGCTCGATGGTGGACGAACAGCTCGGCCGCGATC 165590 Query 5058 TGCTCAGCTTCGGTTGCCCGATCCTCGCCCTGGGCGATCCGGGGCAGCTCCCGCCCGTGG 5117 | | |||||||| ||| || || | |||||||| || || ||||| |||||| | Sbjct 165591 TCATGAGCTTCGGCACCCCCATTCTGGTGCTGGGCGACCCTGGCCAGCTGCCGCCCATAT 165650 Query 5118 GCGGCACCCCCTTCTTCAA-GAACA--AGCCCGACATCCTGCTCACGGAGATTCACCGCC 5174 |||| | |||||||| ||||| |||| || ||||||||| || || ||||| | Sbjct 165651 CCGGCGGCGGCTTCTTCACCGAACACGAGCCGGATTTCCTGCTCAGCGAAATCCACCGGC 165710 Query 5175 AGGCCCAGGACAACCCGATC 5194 |||| | |||||||||||| Sbjct 165711 AGGCGCGCGACAACCCGATC 165730 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 187537117300750