Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acytostelium_20leptosomum_20[genbank_20GCA_5F900092245.1_202017-01- 02] 28,227 sequences; 57,256,845 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq13335 174 2e-38 seq19281 149 7e-31 seq11521 132 6e-26 seq24644 107 2e-18 seq271 105 8e-18 seq3533 89.7 6e-13 >seq13335 Length=4250 Score = 174 bits (192), Expect = 2e-38 Identities = 458/689 (66%), Gaps = 19/689 (3%) Strand=Plus/Plus Query 114743 AGCCCTGGTGCCTTATCTGGGCAGAAGAGAGACCATTGACCACCCTCCTCAACACGCTTC 114802 || ||||| |||| | ||||||||||| ||||| | | ||||||| |||| | Sbjct 2285 AGGCCTGGCGCCTCGTTCGGGCAGAAGAGTGACCAGTCGGCGTTGGCCTCAACGCGCTGC 2344 Query 114803 ATGAAGAGGTCTGGGATCCAGAGAGCTGAGAAGAGATCCCGACAGCGAGCTTCT--TCAT 114860 || || | ||| | ||||||||| || ||||||| || || ||| || ||| || | Sbjct 2345 ATAAACAAGTCAGAGATCCAGAGTGCGTAGAAGAGGTCGCG--AGCACGCATCTCCTCCT 2402 Query 114861 CCCCCTGATTGAGACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGT 114920 || || || |||| || | || |||||||| || |||||||| || ||||||| Sbjct 2403 TGCCGTGGTTCTTGCGCAGGTCAAGGAACTCCATGATGTCGGCGTGCCATGGCTCCAGGT 2462 Query 114921 ACACCGCGATTGACCCCTTACG---ACGACCAGCCTGGTTTACATACCTCGCTGTGGCAT 114977 | | || | | ||||| || | ||| |||||| ||||| | || ||| | | Sbjct 2463 AGATGGCAAAGGCGCCCTTGCGCTTGCCGCCACCCTGGTCAACATAACGTGCAGTGTCGT 2522 Query 114978 TAAATACGCGAAGCATTGGAATGATACCATCAGATTGGCCATTTGTCCCCCGAA--TACG 115035 |||| || || |||||||||| | || | || || || || || || | |||| Sbjct 2523 TAAAGACACGCAGCATTGGAACCAGTCCGTTCGAGGTACCGTTGGTGCCGCGGATGTACG 2582 Query 115036 AGACTTATTGGCTCTGACATCATGGATGTGCATACCAATACCCCCTGCCCACTTTGAGAT 115095 || ||| | || | || | || ||| || || || ||| |||| ||| Sbjct 2583 AG--CGCGCGGCACGGATCTTGTGCACCGACAAACCGATGCCTCCGGCCGACTTGCTGAT 2640 Query 115096 TTGCGCGCACTCCGTGAGACTGCCGTAGATCCCGTCGATCGAGTCACCCTT-ATTTGCGA 115154 ||||||| | | ||| | ||||||| || ||||| ||||| |||| || ||| | Sbjct 2641 CAATGCGCACTGCTTCAGAGTATCGTAGATTCCATCGATAGAGTCGTCCTTCATCTGC-A 2699 Query 115155 TAAGGAAGCAGCTCGACATTTGTGGCCTTGGTGTACCAGCGTTGAAGAGGGTTGGTGTCG 115214 |||||||| |||||| || ||| |||| || || | |||||| || || || || | Sbjct 2700 CCAGGAAGCATGACGACATCTGGGGCATTGGCGTGCCCGAGTTGAACAGCGTGGGCGTGG 2759 Query 115215 CGTGGATGAACATACCTTGGGACATCTTATCGTAGGTCTCCAAGACGGCGGGAATGTCTT 115274 | || |||||| | | |||| | |||||||| | | | ||||| |||||| Sbjct 2760 CATGCGTGAACAGGCGACGCGACAGCAGCTCGTAGGTGTGGATGGCGGCGTCAATGTCGC 2819 Query 115275 CCCCGTGAATACCGATCGAGACCCGCATAAACATGTATTGGGG-TGTT--TCCATCAGGA 115331 ||||| || |||||||| || ||||| | ||||| ||||| | | | ||| | Sbjct 2820 GGCCGTGGATGCCGATCGACACACGCATCAGCATGTGCTGGGGACGCTCGACAATCTCGT 2879 Query 115332 TACCATCGAGCCTCTGGAGGTAACTCTTCTCCAAGGTCTTGAGACCAAAATAACCAAAGT 115391 | |||| | ||| ||||| |||||||| | ||||||| |||||| | || | | Sbjct 2880 T---GTCGATGCGCTGCAGGTAGCTCTTCTCGAGTGTCTTGAAGCCAAAAAAGTCATAAT 2936 Query 115392 CATAGTCCCTCTTCGTGACGATGTCATCC 115420 || |||| | ||| | ||||| || || Sbjct 2937 CAAAGTCGCGCTTGTAGTCGATGGCAGCC 2965 Score = 120 bits (132), Expect = 4e-22 Identities = 377/578 (65%), Gaps = 12/578 (2%) Strand=Plus/Plus Query 113597 CGGAGGTAGTACATCCCCGTCTTGAGCCCCTGCTTCCAGGCATACATATGCATCGAGGAC 113656 || ||||||||||| || ||||| || |||| |||||||||||| | |||||||||| Sbjct 1118 CGCAGGTAGTACATGCCAGTCTTCAGTCCCTTCTTCCAGGCATAAAAGTGCATCGAGGTG 1177 Query 113657 AACTTGGAGAGTGTTGGACTTTCCATGAAGAGGTTCATACTTTGGGATTGATCGATGAAG 113716 | ||||| | |||| | || || | ||| | || || ||| |||||||| Sbjct 1178 AGCTTGGCAAAGCTTGGCTCGGCGATAAACACGTTGAAGCTCTGACTTTGGTCGATGAAA 1237 Query 113717 CGTCCACGATCCGCCGCCATATCAATCACATCCTTCATCTTGATTTCCCACACAGTTCTG 113776 ||||| || ||||||||||| |||| | ||| |||||||| || || Sbjct 1238 GCACCACGGTCGGCCGCCATATCGATCAGTGTGCGCTGACGGATCTCCCACACGGTCTTG 1297 Query 113777 TAGAGGTTCTTAATATCATCTGGGATATCCACGATATTTTGGATGGAGCCACCCGCCTTG 113836 || || | || | || || ||||| |||| ||||| || |||| ||| Sbjct 1298 TACAGCTCTTTCAGGTCTTCGGGGATGGAATCGATCGCCTGGATCGAACCAC---GGTTG 1354 Query 113837 ACCATGAGATC---CTTCATATCCTTTGACCAGAGACCAATCTTTTTGAGATCCTCCACG 113893 | |||| || |||||| || || ||| ||||| | | | |||| || Sbjct 1355 GCAATGATCTCGTTCTTCATCTCGGGTGTCCACAGACCGAGTGCCATCAAGTCCTGCAGC 1414 Query 113894 AGATGCTTATTGACAACAACAAACTCACCCGCGAGGGTGCGTCTCAGATAGATATTGGTC 113953 || ||||| ||||| || |||||||| || || || | || || ||| | Sbjct 1415 AGCTGCTTGTTGACGACGGTGAACTCACCGGCAAGCACACGACGACTGTAAATGTTGCTG 1474 Query 113954 GTGTATGGCTC-AAAGCACTCATTGTTACCCAAGATTTGGGCGGTGGAGGCTGTGGGCAT 114012 ||||||||||| ||||| || ||||| || | |||||||| ||| || || |||||||| Sbjct 1475 GTGTATGGCTCGAAAGC-TTCGTTGTTGCCGAGGATTTGGGAGGTCGATGCGGTGGGCAT 1533 Query 114013 GGGTGCCATGAGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGTTCCTTGAGGGCGTC 114072 || || || | | ||||| || ||||| | || ||||| | ||| || || Sbjct 1534 TGGAGCAATCAACAAACTGTTGCGCAGACCAGTCTCGACGATGCGCTTCTTCAGTCCGGT 1593 Query 114073 CCAGTCGTAGTTGAGCTTTG--TCTCCCCCTGCCACATATCAAACTGGAGGATACCTTGG 114130 |||||| || | | ||| | | | || ||| | ||| |||||||| |||| | | Sbjct 1594 CCAGTCCCAGCGGGGGGTTGGTTGTACACC--CCAAAAATCGTACTGGAGGGTACCCTTG 1651 Query 114131 GAGGCTGGCGATCCCTCAAATGTCTCGTATGGGCCCTC 114168 ||| || || || |||| | ||| | |||||| Sbjct 1652 CTGGCAGGGGAGCCGGCAAACGATGGGTACGAGCCCTC 1689 >seq19281 Length=570 Score = 149 bits (164), Expect = 7e-31 Identities = 191/261 (73%), Gaps = 2/261 (1%) Strand=Plus/Plus Query 115058 TGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGACTG 115117 |||||| | ||| || || || || |||| ||||| | ||||||| | ||||| || Sbjct 99 TGGATGGCGACACCGATGCCACCAGCAGACTTGGAGATGAGAGCGCACTGCTTGAGAGTG 158 Query 115118 CCGTAGATCCCGTCGATCGAGTCACCCTT-ATTTGCGATAAGGAAGCAGCTCGACATTTG 115176 ||||||| || ||||||||||| |||| || || || |||||||| ||||||||| Sbjct 159 TCGTAGATGCCCTCGATCGAGTCCTCCTTCATCTG-GACGAGGAAGCACGACGACATTTG 217 Query 115177 TGGCCTTGGTGTACCAGCGTTGAAGAGGGTTGGTGTCGCGTGGATGAACATACCTTGGGA 115236 || | || || ||||||||||| |||||||| || ||||| |||||| || || || Sbjct 218 AGGGATGGGAGTGCCAGCGTTGAACAGGGTTGGCGTGGCGTGAGTGAACAGACGCTGCGA 277 Query 115237 CATCTTATCGTAGGTCTCCAAGACGGCGGGAATGTCTTCCCCGTGAATACCGATCGAGAC 115296 | | | |||||| | | | |||| |||||| ||||| || || |||||||| Sbjct 278 GAGCAGGTTGTAGGTGTGGATGGCGGCATCAATGTCGGTGCCGTGGATGCCAATCGAGAC 337 Query 115297 CCGCATAAACATGTATTGGGG 115317 ||||| | ||||| |||||| Sbjct 338 ACGCATCAGCATGTGTTGGGG 358 >seq11521 Length=1534 Score = 132 bits (146), Expect = 6e-26 Identities = 252/368 (68%), Gaps = 6/368 (2%) Strand=Plus/Plus Query 172589 GGCCAGAAGTAGTGGATCATATTCAGGATGAGACCCTTAATGTGTGAACCATCGTTATCC 172648 ||||| |||| ||| |||| || | || | |||||| ||||| |||||||||| ||| Sbjct 322 GGCCAAAAGTGGTGAATCAAGTTGATGAGCAAACCCTTGATGTGGGAACCATCGTGATCT 381 Query 172649 GCATCCGTCATAATCATAAGCCGACCATAGCGAAGCTCGGAAACATCTTGATACTCCTTA 172708 ||| ||||| ||||| || | || ||||| ||| || || | |||||||| Sbjct 382 TGATCAGTCATGATCATCAGATGGCCGTAGCGGAGCGACTTGACGTCGTCGTACTCCTTG 441 Query 172709 CCCTGTTGAAGACCCAAGATCTTCTTGAGATCATTGAACTCTTGGTTTGATGT-GAGTTG 172767 || || || ||||||| ||| | | | |||| ||||| |||||| | || | Sbjct 442 CCGTGCTGCAGACCCATGATGGTGACAATGTTGTTGATCTCTTCGTTTGACATTGAATCA 501 Query 172768 CGCCA--CTGAAGCATCGCGGACATTTTTACACTTCCCACGGAGAGGGAACACACCGTAG 172825 || |||| || || ||||| ||| || ||||||||| |||||| Sbjct 502 CGGGTGGCTGACTCA---CGCACATTCAGCAGCTTACCCTTGAGAGGGAAGCATCCGTAG 558 Query 172826 TGATCACGACCAACCACAGAAAGACCAGCAACTGCGAGGGTCTTCGCGGAATCACCCTCC 172885 || || | || |||||| | ||| || ||||| || ||||| || ||||| ||||| Sbjct 559 TGGTCCCATCCCACCACACTGATACCGGCGACTGCCAGAGTCTTGGCAGAATCTCCCTCT 618 Query 172886 GTCACGATGAGCGTACACTTTCCAGATTGTGCCGTCCCCGCCTTGTTCGCATCGTCCAAC 172945 |||| ||| | ||||||| | |||| ||||| || ||| ||| || ||||||||| Sbjct 619 GTCAAGATCAATGTACACTCGTCTGATTTGGCCGTTCCTGCCAAGTTTGCTTCGTCCAAC 678 Query 172946 TTGGGAAT 172953 ||||| || Sbjct 679 TTGGGTAT 686 >seq24644 Length=724 Score = 107 bits (118), Expect = 2e-18 Identities = 259/385 (67%), Gaps = 14/385 (4%) Strand=Plus/Plus Query 10774 CACGGTGATCTTACGATCAAAGCGACCTGGGCGGAGGAGGGCGTCGTCAAGGATATCAAT 10833 |||| ||||| ||| || |||||||| ||||| || || ||| ||| ||||| || Sbjct 149 CACGCCGATCTGACGGTCGAAGCGACCGGGGCGCAGCAGCGCGGGGTCGAGGATGTCGGG 208 Query 10834 GCGGTTCGTCGCCGCGATGACAACGATGCCCGTCTCGTT---ATCAAAGCCATCCATCTC 10890 ||||| ||||||||||| |||||| | || |||| || ||||| |||||||| Sbjct 209 ACGGTTGGTCGCCGCGAT---CACGATGACGTTCGCGTTCGGGTCGAAGCCGTCCATCTC 265 Query 10891 AGTCAAGAGTTGATTGATGGTTTGTTCGCGTTCATCATT--CG-CGGGCATACCACCCGC 10947 || | || |||| ||| || ||||| ||||| || || || ||| ||| || Sbjct 266 GACCAGCATCTGGTTGAGGGTCTGCTCGCGCTCATCGTTGCCGCCGCCCAT---ACCGGC 322 Query 10948 ACTGCGTTGCTTACCGACGGCGTCAATTTCATCGATGAAAACGATACACGGTTGATTTTC 11007 | ||| || ||||||||||| || || |||||||| | ||| || ||| || Sbjct 323 GCCGCGGTGACGGCCGACGGCGTCGATCTCGTCGATGAAGATGATGGCGGGCGCATTCTC 382 Query 11008 ACGGGCAACTTCAAAGATATCTCGGACTCTCTTGGCACCGACACCCACAAACATTTCCAC 11067 ||| | |||| || || || | ||| ||||| || || ||||| || || Sbjct 383 CTTGGCCTGGCCGAAGAGGTCGCGCACGCGAGAGGCGCCGACGCCGACGAACATCTCGAC 442 Query 11068 AAAATTGGCGGCGGAACATTG-GATGAAGGGGACGTTGGATTCACCCGCGATGGCTCGGG 11126 || | || ||| | || | | ||| ||| || | || || |||| ||| |||| Sbjct 443 GAAGTCGGAACCGG-AGATGGAGTAGAACGGGGCGCCTGCCTCGCCGGCGACGGCGCGGG 501 Query 11127 CGAGGAGGGTCTTCCCCGTCCCAGG 11151 ||||||| ||||| || || || || Sbjct 502 CGAGGAGCGTCTTGCCGGTTCCGGG 526 >seq271 Length=183270 Score = 105 bits (116), Expect = 8e-18 Identities = 251/374 (67%), Gaps = 4/374 (1%) Strand=Plus/Plus Query 10780 GATCTTACGATCAAAGCGACCTGGGCGGAGGAGGGCGTCGTCAAGGATATCAATGCGGTT 10839 || || ||| ||||| || || || || || | ||| || || | ||| ||||| Sbjct 17958 GACCTGACGGTCAAAACGGCCCGGACGCAGCAAGGCCGGATCGAGAACATCGGGACGGTT 18017 Query 10840 CGTCGCCGCGATGACAACGATGCCCGTCTCGTTATCAAAGCCATCCATCTCAGTCAAGAG 10899 ||||| ||||| | | || ||| | | || || ||||||||||| || || Sbjct 18018 GGTCGCAGCGATCAGGATGACGCCTTCATTGGCCTCGAAACCATCCATCTCGACCAGCAG 18077 Query 10900 TTGATTGATGGTTTGTTCGCGTTCATCATTCGCGG-GCATACCACCCGCACTGCGTTGCT 10958 || || | || ||||||||||| ||||| || || | ||| || | ||| || Sbjct 18078 CTGGTTCAGCGTCTGTTCGCGTTCGTCATTGCCGCCGCCCAG-ACCGGCGCCGCGATGAC 18136 Query 10959 TACCGACGGCGTCAATTTCATCGATGAAAACGATACACGGTTGATTTTCACGGGCAACTT 11018 ||||| || || ||||| |||||||| | ||| || ||| ||| | || || Sbjct 18137 GGCCGACCGCATCGATTTCGTCGATGAAGATGATGCAGGGTGCATTCTTCTTCGCCTGTT 18196 Query 11019 CAAAGATATCTCGGACTCTCTTGGCACCGACACCCACAAACATTTCCACAAAATTGGCGG 11078 | || || || || || | | ||||||||||| || |||||||| || || | || Sbjct 18197 CGAACATGTCACGCACACGCGATGCACCGACACCGACGAACATTTCAACGAAGTCGGAAC 18256 Query 11079 CGGAACATTG-GATGAAGGGGACGTTGGATTCACCCGCGATGGCTCGGGCGAGGAGGGTC 11137 ||| | || | || ||| || || |||| |||||| |||||||| || || || || ||| Sbjct 18257 CGG-AGATGGTGAAGAACGGCACATTGGCTTCACCGGCGATGGCGCGCGCCAGAAGCGTC 18315 Query 11138 TTCCCCGTCCCAGG 11151 || || || || || Sbjct 18316 TTACCGGTACCGGG 18329 >seq3533 Length=1137 Score = 89.7 bits (98), Expect = 6e-13 Identities = 145/208 (70%), Gaps = 3/208 (1%) Strand=Plus/Minus Query 126047 GCAAACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCCT 126106 ||||| || ||| |||||||||||||| ||| || || || || ||| || ||| Sbjct 951 GCAAAGTCGCAGTGTAGACCCTCGTCACGACTGATCAGCTCGTTGGAAAAGGTAAGGCCT 892 Query 126107 GGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGATT 126166 ||||| | ||||| |||||||||||| | || |||||||| || ||||||||| Sbjct 891 GGCATTAAACCCCTTTTCTTCAACCAGTAGATGGCACAAAAGCTGCCGCTGAAGAAGATA 832 Query 126167 CCCTCCACACACGCGAACGCAAAGAGACGCTCAGCAAAGGAGCGCGACTTTGTGTCAAAC 126226 ||||| || || || || | | ||| || || || || | || || ||| | | Sbjct 831 CCCTCAACCGCAGCAAATGCCACCAAACGTTCGGCGAATGAACAAGAGTTGGTG---ATC 775 Query 126227 CACTTCATCGCCCACTGCGCCTTTTTCT 126254 || || |||||||| ||||| |||| Sbjct 774 CAGCGCAGCGCCCACTCTGCCTTCTTCT 747 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597142831249160