Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acytostelium_20leptosomum_20[genbank_20GCA_5F900092245.1_202017-01- 02] 28,227 sequences; 57,256,845 total letters Query= NC_010342.1 Length=39245 Score E Sequences producing significant alignments: (Bits) Value seq5374 259 1e-64 >seq5374 Length=2118 Score = 259 bits (286), Expect = 1e-64 Identities = 365/508 (72%), Gaps = 10/508 (2%) Strand=Plus/Minus Query 15026 AACGTGTTCGTTGCGCCCTCGGTGCATGCGATCGGCTGCCTGGCGGCGGTGCAGCCGTGG 15085 ||||||||| | ||||| ||| | || |||| | ||||| ||| ||| ||| Sbjct 914 AACGTGTTCCTGGCGCCGTCGTCCCTGGCCATCGCCGCGCTGGCCAAGGTCAAGCAATGG 855 Query 15086 CAAAGCCCCGGCAACCAGGGCGTGTTGATCCAGGGCGTCGCGCGCCACGTGGATTACAAC 15145 ||||||| ||||| |||| || | | | ||| | ||| || || |||||| Sbjct 854 GAAAGCCCGGGCAATCAGGTGACCTTCGCCGAAGACGTGTCCCGCGTGGTTGAGTACAAC 795 Query 15146 ATTCTCGACAAGTCGACTGATGGCGACCTGCTCAACCGCTACGGCATCAGCTACTACGCG 15205 || ||||||| || || || |||||||||||||||||||||||| | ||||||||||| Sbjct 794 ATCCTCGACACCTCCACCGAAGGCGACCTGCTCAACCGCTACGGCGTGAGCTACTACGCC 735 Query 15206 CGCACCAGCCTGGGCGGGTTCTCGCTGATCGGCAACCGCACGGTGACCGGCGAGTTTATC 15265 ||||||| ||| ||||| ||||||||| | || |||||| | | |||||| |||| ||| Sbjct 734 CGCACCATCCTCGGCGGTTTCTCGCTGCTGGGTAACCGCTCCATCACCGGCAAGTTCATC 675 Query 15266 TCGCACGTAGGCCTTGAAGACGCCATCGGTCGCAAGATCGTC--GGCGCGTCGCAGAAGG 15323 |||| ||||| ||||| || ||| | |||||| | ||| ||| || | ||||| | Sbjct 674 AGCTACGTGGGCCTGGAAGATGCGATCAGCCGCAAGCTGGTCAAGGC-CGGC-CAGAAAG 617 Query 15324 CCATGGCGCAGAACTTGACCAAGAGCTTCATGGAGCAGGAGGT---GCGCAAGGTTGATG 15380 ||||||| ||||| |||||||| |||||||| |||||||| ||||| | | | Sbjct 616 CCATGGCCAAGAACCTGACCAAGTCGTTCATGGACCAGGAGGTCAAGCGCA---TCAACG 560 Query 15381 CGTTCGTTCAGGATCAGGTTGCTGCTGAGATCATCCCTGGTGGTCGTGTCTATCTGCATC 15440 | | || | ||| || | |||| ||| || || || | || || ||||| | Sbjct 559 ACTGGCTGCAAACCCTGGTGGCCGACGAGACCATTCCCGGCGGCAGCGTGTACCTGCACC 500 Query 15441 CTGACCTCAACACGGTCGAGCGCTATAAAAACGGTAGCTGGTACATCGTCATCGAGTACG 15500 | || | |||| |||||| || || ||||| | ||||| |||||||||||| |||| Sbjct 499 CGGAATTGAACAGTGTCGAGAAGTACAAGAACGGCACCTGGTTCATCGTCATCGACTACG 440 Query 15501 GCCGCTATTCCCCCAATGAGCACATGAT 15528 ||||||| | || || || |||||||| Sbjct 439 GCCGCTACGCGCCGAACGAACACATGAT 412 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 125420345552418