Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acytostelium_20leptosomum_20[genbank_20GCA_5F900092245.1_202017-01- 02] 28,227 sequences; 57,256,845 total letters Query= NC_011103.1 Length=60195 Score E Sequences producing significant alignments: (Bits) Value seq46 98.7 4e-16 >seq46 Length=971285 Score = 98.7 bits (108), Expect = 4e-16 Identities = 194/279 (70%), Gaps = 10/279 (4%) Strand=Plus/Plus Query 43304 TTGTTCTCACCAGCAAGCTGATCGACGGCACTTTCCCTGACTATCAGCGCGTCATCCCCA 43363 ||||||| ||| ||||||||| |||||||| ||||| ||||||||||||||||| || Sbjct 535704 TTGTTCTGACCTCCAAGCTGATTGACGGCACCTTCCCGGACTATCAGCGCGTCATTCCAT 535763 Query 43364 CCCAGAACGACAAGAAGATCGTCTTCGGCAGCGATGACATGCGCCAGGCAGCC-TCG--C 43420 || ||||||||||| | | ||| | || | || | ||| | | ||| | | | Sbjct 535764 CCGGCAACGACAAGAAACTGACCATCGACCGCCA-GAGCTTCGC--GTCTGCCGTTGACC 535820 Query 43421 GCGTCTCTGTGATCTCGTCTGAGCGTGGCCGCGCGGTGAAGTTATCCTTCGCGGAGGGGG 43480 ||||||| ||| ||| ||||||||||| || || ||| | | | || || || Sbjct 535821 GCGTCTCGACGATTTCGAGCGAGCGTGGCCGTGCCGTCAAGCTGACGATTGCCGATGGCC 535880 Query 43481 AAGCGAAGCTGGCCGTGAGCAGTCCGGAAACCGGAAGCGCCACCGACGAAATCTTCG--T 43538 | || || | || | || |||||| | || |||||||| ||||| | | || | Sbjct 535881 AGCTGACATTGACGGTCAACAATCCGGATTCGGGCAGCGCCACGGACGAGCT-TGCGGCT 535939 Query 43539 GAACTACGATGGCGACCCGATCGATATCGGATTCAACGC 43577 | | || || ||| |||||||| ||||| ||||| || Sbjct 535940 G-ATTATGACTCCGATCCGATCGAGATCGGCTTCAATGC 535977 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 192437874037718