Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acytostelium_20leptosomum_20[genbank_20GCA_5F900092245.1_202017-01- 02] 28,227 sequences; 57,256,845 total letters Query= NC_011166.1 Length=66530 Score E Sequences producing significant alignments: (Bits) Value seq11752 87.8 8e-13 >seq11752 Length=4131 Score = 87.8 bits (96), Expect = 8e-13 Identities = 119/164 (73%), Gaps = 3/164 (2%) Strand=Plus/Minus Query 5752 CCAACCAGCACCAGAGACTCGAAATCGAATCGATGATCGTGGATGGCCGAGTGATTGAAG 5811 || |||| ||| | ||| ||| | ||| || ||||||||||| || ||| | ||| Sbjct 174 CCCACCAAGACCCGCGACATGAAGTTGAAGCGGTGATCGTGGATCGCGGAGCTTTCAAAG 115 Query 5812 CAAAGCCGACGCGGCAGCTCCGGGTGCCAAACATGGAGGCGACCG--GCC-GGAAGTTGG 5868 || || ||||| | ||| |||||||| ||||| ||||| | ||| || ||| Sbjct 114 CAGGCGCGGCGCGGTAACTCAGGGTGCCAGACATGCAGGCGCTGGTTGCCTTCCAGCTGG 55 Query 5869 ACCTGAATGAACCCCAGGCCGTGCAGAGTGATCTTGTCCTTCAT 5912 ||||| | || |||||||||||||| ||||||||||| |||| Sbjct 54 ACCTGCACAAAGCCCAGGCCGTGCAGGGTGATCTTGTCGGTCAT 11 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 212698003183177