Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acytostelium_20leptosomum_20[genbank_20GCA_5F900092245.1_202017-01- 02] 28,227 sequences; 57,256,845 total letters Query= NC_011273.1 Length=164602 Score E Sequences producing significant alignments: (Bits) Value seq20784 432 4e-116 seq2422 403 2e-107 seq25107 399 2e-106 seq7253 387 1e-102 seq15060 87.8 2e-12 >seq20784 Length=1386 Score = 432 bits (478), Expect = 4e-116 Identities = 374/461 (81%), Gaps = 2/461 (0%) Strand=Plus/Minus Query 156414 CCTGCCGATGTTCTGGTCGTCGCGAGGC-AAGCTCACCAACACCGCCGACATGATCCGGC 156472 ||||||||| | ||||| ||| |||| ||||| || ||||| |||||| ||||||| | Sbjct 1386 CCTGCCGATCTATTGGTCCTCGA-AGGCGAAGCTGACGAACACGGCCGACCTGATCCGCC 1328 Query 156473 TCATCATCCGGGACGAGGCCGTGCACGGCTACTACATCGGCTACAAGTTCCAGAAGGGCC 156532 |||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct 1327 TCATCATCCGCGACGAGGCCGTGCACGGGTACTACATCGGCTACAAGTTCCAGAAGGGCC 1268 Query 156533 TGGAGAAGGAGACCAAGGCCCGCCAGCAGGAACTCAAGGACTACACCTATGAGCTGCTGT 156592 | ||||| |||||| ||| |||| | || |||||||||||||| | ||| ||| Sbjct 1267 TCGAGAACGAGACCCAGGAGCGCCGCGATGAGCTCAAGGACTACACGTTCTCGCTCATGT 1208 Query 156593 TCGAGCTGTTCGACAACGAGCAGGAGTACACCCAGGACCTCTACGACGCCACCGGCCAGA 156652 |||||| | |||||||||| | ||||||| |||||||||||||||| ||| | || Sbjct 1207 ACGAGCTCTACGACAACGAGGTGCAGTACACGCAGGACCTCTACGACGGTGTCGGTCTGA 1148 Query 156653 CCGAGGACGTGAAGAAGTTCCTGCGGTACAACGGCAACAAGGCCCTGCAGAACCTGGGCT 156712 |||| ||||||||||||||||||| ||||||| |||||||||||| ||||||||||| Sbjct 1147 CCGAAGACGTGAAGAAGTTCCTGCACTACAACGCCAACAAGGCCCTCATGAACCTGGGCT 1088 Query 156713 ACGACGCGCTGTTCAGCCGCAGCGACTGCGACGTCAACCCGGCCATCCTGAGCGCGCTGT 156772 |||| ||| ||||| | ||||| | |||| |||||||| |||||| || || | Sbjct 1087 ACGAGGCGATGTTCCCCTCCAGCGTCACGAACGTGAACCCGGCGATCCTGTCGGCACTCT 1028 Query 156773 CGCCCGGTGGAGACGAGAACCACGACTTCTTCTCGGGGTCGGGCAGCACGTACGTCATGG 156832 |||| | ||||||||||||||||||||||||||||| ||| |||||||||| | Sbjct 1027 CGCCGAACGCCGACGAGAACCACGACTTCTTCTCGGGGTCAGGCTCGTCGTACGTCATCG 968 Query 156833 CCAAGGGTGTGGTCACCGAAGACGACGACTGGGACTTCTGA 156873 ||||| | || ||| |||||||||||||||||||||||| Sbjct 967 GCAAGGCCGAGGCCACGGAAGACGACGACTGGGACTTCTGA 927 >seq2422 Length=24180 Score = 403 bits (446), Expect = 2e-107 Identities = 663/944 (70%), Gaps = 14/944 (1%) Strand=Plus/Plus Query 155933 GCGCCATCAACTGGAACCGC-GTGATCGACGAGAAGGACGCGGAGGTGTGGAACCGGCTG 155991 |||| ||||||||||||||| |||| ||||| || || ||||| |||||||| || Sbjct 7822 GCGCAATCAACTGGAACCGCATTGAT-GACGATAAAGATCTTGAGGTCTGGAACCGTCTC 7880 Query 155992 ACCAACAACTTCTGGCTGCCGGAGAAGATCCCGGTGTCCAATGACGTCCAGTCGTGGCAC 156051 |||| ||||||||||||||||||||| | ||| |||| || ||| | | | ||||| Sbjct 7881 ACCAGCAACTTCTGGCTGCCGGAGAAAGTGCCGCTGTCGAACGACATTCCCGCCTGGCAA 7940 Query 156052 CAGCTGACCGAGGAAGAGCGCCTGATCACCATGCGGGTGTTCACCGGCCTGACGATGCTG 156111 || | || || |||| | | | ||||| || || || ||||| |||| |||| Sbjct 7941 ACCCTCAGCGCGGCGGAGCAGCAGTTGACCATTCGCGTCTTTACCGGATTGACCCTGCTT 8000 Query 156112 GACACCATCCAGGGCACCGTCGGCGCGGTCTCGCTCATCCCGGACGCCATCACCCCGCAC 156171 |||||||| ||| |||||||||||| |||| || |||||||| | |||||||| Sbjct 8001 GACACCATTCAGAACACCGTCGGCGCCCCGGCGCTAATGGCGGACGCCTTAACCCCGCAT 8060 Query 156172 GAGGAGGCGGTGTACACCAACATCGCGTTCATGGAGAGCGTGCACGCACGCAGCTACTCG 156231 |||||||||||| | |||||| || |||||| || || || ||| ||| Sbjct 8061 GAGGAGGCGGTGCTGTCGAACATCAGCTTTATGGAGGCGGTTCATGCCCGCTCTTACAGC 8120 Query 156232 AACATCTTCTCGACGCTGTGCTCCACCAAGGAGATCGACGCCGCGTTCCGCTGGTCGGAG 156291 |||||| || ||||||||| || |||||| | || ||||| ||| || |||| Sbjct 8121 TCCATCTTTTCCACGCTGTGCCACAGCAAGGAAGTGGATGCCGCCTTCGCCT----GGAG 8176 Query 156292 -GAGAAC-GCCAAC--CTGCAGAAGAAGGCTGAGATCGTGCTCAGCTACTACAACGGTGA 156347 || | | || | | |||||| ||||| || | |||| | ||||| | | || Sbjct 8177 CGAAAGCTGCGATCCTCTGCAGCGCAAGGCGCAGCTGATGCTGGGTTACTATCAGGCCGA 8236 Query 156348 CGACCCGCTCAAGCGCAAGGTCGCCTCCACGCTGCTGGAGGGCTTCCTGTTCTACAGCGG 156407 ||| ||||| ||| || ||||| | | | || || ||| || |||||| ||| Sbjct 8237 CGAGCCGCTGAAGAAAAAAATCGCCAGCGTGTTCCTCGAATCCTTTCTCTTCTACTCCGG 8296 Query 156408 CTTCTACCTGCCGATGTTCTGGTCGTCGCGAGGCAAGCTCACCAACACCGCCGACATGAT 156467 ||||| |||||||||| || || || || ||||| |||||||| || || |||| Sbjct 8297 CTTCTGGCTGCCGATGTACTTCTCCAGCCGGGGAAAGCTGACCAACACTGCGGATCTGAT 8356 Query 156468 CCGGCTCATCATCCGGGACGAGGCCGTGCACGGCTACTACATCGGCTACAAGTTCCAGAA 156527 ||| || ||||| || || || || ||||| ||||| |||||||||||||||| |||||| Sbjct 8357 CCGCCTGATCATTCGCGATGAAGCGGTGCATGGCTATTACATCGGCTACAAGTACCAGAA 8416 Query 156528 GGGCCTGGAGAAGGAGA-CCAAGGCCCGCCAGCAGGAACTCAAGGACTACACCTATGAGC 156586 || ||||||| | | || ||| || | | ||| | || | | | || || | Sbjct 8417 AGGACTGGAGATCGTCAGCCCCGGCAAGCGCG-AAGAATTGAAAAATTTCGCCCTCGATC 8475 Query 156587 TGCTGTTCGAGCTGTTCGACAACGAGCAGGAGTACACCCAGGACCTCTACGACGCCACCG 156646 ||||| | || || | ||||||||| | || |||| || ||| || |||| || | || Sbjct 8476 TGCTGATGGATCTTTACGACAACGAACTGGCCTACAGCCGGGAGCTGTACGGCGAGAGCG 8535 Query 156647 GCCAGACCGAGGACGTGAAGAAGTTCCTGCGGTACAACGGCAACAAGGCCCTGCAGAACC 156706 || | ||| ||||| | |||||| | ||||||| |||||| || ||| ||||| Sbjct 8536 GCTGGTTCGACGACGTCAGCGCTTTCCTGTGCTACAACGCCAACAAAGCGCTGATGAACC 8595 Query 156707 TGGGCTACGACGCGCTGTTCAGCCGCAGCGACTGCGAC-GTCAACCCGGCCATCCTGAGC 156765 | |||||||| ||||||||| | || | || ||| | ||||| ||||| ||||| Sbjct 8596 TCGGCTACGAGGCGCTGTTC-CCGGCGGAGATGGCGGCGGTCAATCCGGCAATCCTCGCA 8654 Query 156766 GCGCTGTCGCCCGGTGGAGACGAGAACCACGACTTCTTCTCGGGGTCGGGCAGCACGTAC 156825 |||||||||||| | ||||| ||||| ||||| ||||| || || ||| | | ||| Sbjct 8655 GCGCTGTCGCCCAACGCCGACGAAAACCATGACTTTTTCTCCGGTTCCGGCTCCTCCTAC 8714 Query 156826 GTCATGGCCAAGGGTGTGGTCACCGAAGACGACGACTGGGACTT 156869 || || | || | | |||| |||||||| |||||||| Sbjct 8715 GTGATAGGAAAAATGGAAGAGACCGCCGACGACGATTGGGACTT 8758 >seq25107 Length=428 Score = 399 bits (442), Expect = 2e-106 Identities = 340/419 (81%), Gaps = 0/419 (0%) Strand=Plus/Plus Query 155995 AACAACTTCTGGCTGCCGGAGAAGATCCCGGTGTCCAATGACGTCCAGTCGTGGCACCAG 156054 ||||||||||||||||| |||||| | ||| |||| || ||||| ||||||||| || | Sbjct 10 AACAACTTCTGGCTGCCCGAGAAGGTGCCGCTGTCGAACGACGTGCAGTCGTGGAACACG 69 Query 156055 CTGACCGAGGAAGAGCGCCTGATCACCATGCGGGTGTTCACCGGCCTGACGATGCTGGAC 156114 || ||| || |||| ||| |||||||||||||||||||||| || ||| |||| ||| Sbjct 70 CTCACCCCCGACGAGCAGCTGCTCACCATGCGGGTGTTCACCGGTCTCACGTTGCTCGAC 129 Query 156115 ACCATCCAGGGCACCGTCGGCGCGGTCTCGCTCATCCCGGACGCCATCACCCCGCACGAG 156174 || |||||||||||||| |||||||| ||||| ||||| ||||| |||||||| ||||| Sbjct 130 ACGATCCAGGGCACCGTGGGCGCGGTGTCGCTGATCCCCGACGCGATCACCCCTCACGAA 189 Query 156175 GAGGCGGTGTACACCAACATCGCGTTCATGGAGAGCGTGCACGCACGCAGCTACTCGAAC 156234 ||||| |||||||| |||||||||||||||||| |||||||| |||||||| Sbjct 190 GAGGCCGTGTACACGAACATCGCGTTCATGGAGTCGGTGCACGCGAAGAGCTACTCCTCG 249 Query 156235 ATCTTCTCGACGCTGTGCTCCACCAAGGAGATCGACGCCGCGTTCCGCTGGTCGGAGGAG 156294 ||||||||||| || || || ||||||||||||| |||||||||||||| ||| Sbjct 250 ATCTTCTCGACCCTCGCGTCGACGAAGGAGATCGACGAGGCGTTCCGCTGGTCCACCGAG 309 Query 156295 AACGCCAACCTGCAGAAGAAGGCTGAGATCGTGCTCAGCTACTACAACGGTGACGACCCG 156354 ||| | ||||| |||||||||||| ||||| | | ||||||| | || ||||||||| Sbjct 310 AACCCGAACCTTCAGAAGAAGGCTCAGATCATCATGGACTACTACCAGGGCGACGACCCG 369 Query 156355 CTCAAGCGCAAGGTCGCCTCCACGCTGCTGGAGGGCTTCCTGTTCTACAGCGGCTTCTA 156413 |||||||||||||| |||||||| || |||||| ||||| |||||| |||||||| Sbjct 370 CTCAAGCGCAAGGTGGCCTCCACCCTTCTGGAGTCGTTCCTCTTCTACTCGGGCTTCTA 428 >seq7253 Length=766 Score = 387 bits (428), Expect = 1e-102 Identities = 345/431 (80%), Gaps = 6/431 (1%) Strand=Plus/Plus Query 155934 CGCCATCAACTGGAACCGCGTGATCGACGAGAAGGACGCGGAGGTGTGGAACCGGCTGAC 155993 ||||||||||||||| ||||| |||||||||||||| ||||| ||| | || || Sbjct 339 CGCCATCAACTGGAATCGCGTCCAGGACGAGAAGGACGCCGAGGTATGGGATCGCCTCGT 398 Query 155994 CAACAACTTCTGGCTGCCGGAGAAGATCCCGGTGTCCAATGACGTCCAGTCGTGGCACCA 156053 || ||||||||||||||| || ||| | ||||| ||||| ||| ||| ||| ||| Sbjct 399 CAGCAACTTCTGGCTGCCCGAAAAGGTGCCGGTCTCCAACGACATCCCGTCCTGGGGAAC 458 Query 156054 GCTGACCGAGGAAGAGCGCCTGATCACCATGCGGGTGTTCACCGGCCTGACGATGCTGGA 156113 |||||||| | | |||| | | |||||||||| || ||||| ||||||||| |||| || Sbjct 459 GCTGACCGCGCAGGAGCAGCAGCTCACCATGCGCGTCTTCACGGGCCTGACGCTGCTCGA 518 Query 156114 CACCATCCAGGGCACCGTCGGCGCGGTCTCGCTCATCCCGGACGCCATCACCCCGCACGA 156173 |||||||||||| || |||||||| ||| |||||||||||||| ||||| || ||||| Sbjct 519 CACCATCCAGGGAACGGTCGGCGCCGTCAGCCTCATCCCGGACGCGATCACTCCCCACGA 578 Query 156174 GGAGGCGGTGTACACCAACATCGCGTTCATGGAGAGCGTGCACGCACGCAGCTA---CTC 156230 || |||||||||||||||||||| |||||||| |||||||| || || ||| Sbjct 579 AGAAGCGGTGTACACCAACATCGCCTTCATGGAATCGGTGCACGCGAAGAGTTACAGCTC 638 Query 156231 GAACATCTTCTCGACGCTGTGCTCCACCAAGGAGATCGACGCCGCGTTCCGCTGGTCGGA 156290 | |||||||||||||||||||||||| || ||||||| |||||||||||||||||| Sbjct 639 G---ATCTTCTCGACGCTGTGCTCCACCCCCGACATCGACGACGCGTTCCGCTGGTCGGA 695 Query 156291 GGAGAACGCCAACCTGCAGAAGAAGGCTGAGATCGTGCTCAGCTACTACAACGGTGACGA 156350 ||||||| ||||||||||| ||||| ||||||| ||| |||||||||||| || Sbjct 696 GGAGAACCCCAACCTGCAGCGCAAGGCGCAGATCGTTCTCGACTACTACAACGGCGAGTC 755 Query 156351 CCCGCTCAAGC 156361 |||||||||| Sbjct 756 GCCGCTCAAGC 766 >seq15060 Length=497 Score = 87.8 bits (96), Expect = 2e-12 Identities = 84/108 (78%), Gaps = 0/108 (0%) Strand=Plus/Plus Query 153209 CCTGCTGGCCCTGATCCGCGAGGGTGAGGGCGTGGGCTGCCAGGTGCTGGTGAAGCGCGG 153268 |||||| | || ||||| |||||||||||||| | |||||| ||||| |||| ||| Sbjct 1 CCTGCTCGGTCTCATCCGTGAGGGTGAGGGCGTAGCAGCCCAGGTTCTGGTCAAGCTCGG 60 Query 153269 CGCGGAGCTGACCAAGGTCCGCCAGGTGGTCATCCAGCTGCTGTCCGG 153316 || || || | | ||||||||| ||||||||||||||| ||||| Sbjct 61 TGCCGATCTCAACCGCGTCCGCCAGCAGGTCATCCAGCTGCTCTCCGG 108 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 526412596337040