Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acytostelium_20leptosomum_20[genbank_20GCA_5F900092245.1_202017-01- 02] 28,227 sequences; 57,256,845 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq13335 167 2e-36 seq8653 107 2e-18 seq1351 100 3e-16 seq3381 93.3 4e-14 seq3382 87.8 2e-12 seq4240 86.0 6e-12 seq2999 82.4 8e-11 >seq13335 Length=4250 Score = 167 bits (184), Expect = 2e-36 Identities = 639/978 (65%), Gaps = 38/978 (4%) Strand=Plus/Plus Query 153597 GCAATAGACGCCAGATTACAGACGGCCGTCTCTTC-GGCGTCGCTGTACTGCACGATCTC 153655 ||||| || || || || ||||| ||| ||| || |||| || ||||||| | |||||| Sbjct 2009 GCAATCGATGCAAGGTTGCAGACAGCCACCTCCTCTGGCGACG-TGTACTGGATGATCTC 2067 Query 153656 GGCGCAGAGGTTGCTGCATTTTATGACGCCCAAATTTTGCTGATTGCTTTTGCGATTGCA 153715 || ||| |||||||| | || ||| | || || || ||| |||| |||||| Sbjct 2068 GGTGCACAGGTTGCTCGACGAGATAGTGCCGAGGTTCTGTTGGTTGGACTTGCCATTGCA 2127 Query 153716 CGCGTCTTTGAAGAGCATGTACGGTCCGCCGGTCTCGACTTGCGTTTCGACGAT--AAAC 153773 || ||| ||| | || |||||||| ||| ||||||| || | |||| ||| | | Sbjct 2128 CGAGTCCTTGTATAGGATGTACGGGGTGCCTGTCTCGATCTGGGACTCGAGGATCGAGAA 2187 Query 153774 CTATGCAGGTCCTGCGC-TCGCACCCGCTGC---CGATAGCGGCCCTCGCTCTCGTATCG 153829 | | |||||| || || | | || || ||| ||| ||||| ||||| || Sbjct 2188 CCA--CAGGTCTTGTGCCTTGATGGTGCGGCGTGCGAGGCCGGGTGTCGCT-TCGTAGCG 2244 Query 153830 CTCGTACAGTCGCTCAAACTCGTCGCCGTAGCAGTCGGCGAGGCCGGGACACTGATGCGG 153889 | ||| ||| | |||| ||||| || |||||| ||||| || || | ||| Sbjct 2245 CAGGTAGAGTTCGTTGAACTTCTCGCCCCAGGTGTCGGCAAGGCCTGGCGCCTCGTTCGG 2304 Query 153890 ACACATCAGCGACCACATATCGTCGGCGTTGACGCGTCGCATGAACAGATCCGGCACCCA 153949 || | || ||||| ||| ||| | ||||| |||| |||| || | | ||| Sbjct 2305 GCAGAAGAGTGACCAGTCGGCGTTGGCCTCAACGCGCTGCATAAACAAGTCAGAGATCCA 2364 Query 153950 GAGCGCGTACATGAGGTCGCGCGCCTTGCAA-TCCTCCGCGCCCATGTT---GCGTTTCA 154005 ||| ||||| | ||||||||| || ||| |||||| ||| ||| ||| || Sbjct 2365 GAGTGCGTAGAAGAGGTCGCGAGCAC-GCATCTCCTCCTTGCCGTGGTTCTTGCG---CA 2420 Query 154006 GATTGAGCA-CGCTATAGATGTCGGCGTGCCAGGGTTCAATGTAGACGGCCAGGGCACCT 154064 | | || | | | || ||||||||||||||| || || | ||||| ||| | ||| || Sbjct 2421 GGTCAAGGAACTCCAT-GATGTCGGCGTGCCATGGCTCCAGGTAGATGGCAAAGGCGCCC 2479 Query 154065 TTACGCTTTCCG---CCCTGATCGACGTGGCGCACCATATTGTTGAAGACGCGCACCATG 154121 || ||||| ||| ||||| || || | || | | | ||| ||||| |||| ||| Sbjct 2480 TTGCGCTTGCCGCCACCCTGGTCAACATAACGTGCAGTGTCGTTAAAGACACGCAGCATT 2539 Query 154122 GGTTCCAGGCCGCTTGCGGTGCCGTTGGTCGAATTGATCTTGCTGC-CGCGGGCGCGCA- 154179 || |||| ||| | | ||| |||||||| ||| | || ||| ||| || | Sbjct 2540 GGAACCAGTCCGTTCGAGGTACCGTTGGTGCCGCGGATGTACGAGCGCGC-GGCACGGAT 2598 Query 154180 CTTGATGCACGTTAACGCCAATGCCGCCGCCGTACTT--TGAT--ATGGCAGCGCAGTCG 154235 |||| ||||| | || ||||| ||| | |||| |||| || ||||| | Sbjct 2599 CTTG-TGCACCGACAAACCGATGCCTCCGGCCGACTTGCTGATCAAT----GCGCACTGC 2653 Query 154236 CCCAGCGTCCTGTAGATGCCGTCGATGCTATCGTCGCGGACGCCGAGCAAGAAACACGAA 154295 ||| || |||||| || ||||| ||||| | | || ||| || || Sbjct 2654 TTCAGAGTATCGTAGATTCCATCGATAGAGTCGTCCTTCATCTGCACCAGGAAGCATGAC 2713 Query 154296 CACATTTGCGGAATGCGCGTTCCCGCCGAAAAGAGGGTGGGACTCGCGTGCGTAAACAGT 154355 |||| || || || |||| |||| || || ||||| | || ||||| ||||| Sbjct 2714 GACATCTGGGGCATTGGCGTGCCCGAGTTGAACAGCGTGGGCGTGGCATGCGTGAACAGG 2773 Query 154356 TTTTGGCTCATCATGCGGTACGTTTCGATGGCGTCTTCGATATCATCGCCGTGAATGCCG 154415 | || || ||| || | ||||||| | || || || |||||| |||||| Sbjct 2774 CGACGCGACAGCAGCTCGTAGGTGTGGATGGCGGCGTCAATGTCGCGGCCGTGGATGCCG 2833 Query 154416 AGCGCGACGCGCATGAGCATGTGCTGCGGACGTTCGGCGA-CTCTATTGTCAATCTTCAA 154474 | || || ||||| ||||||||||| ||||| ||| | | ||| ||||| || | Sbjct 2834 ATCGACACACGCATCAGCATGTGCTGGGGACGCTCGACAATCTC-GTTGTCGATGCGCTG 2892 Query 154475 GAGATATCCATTTTCGAGGGTTTTGTAACCGAAATACTTGTATTCAAAATCTAGCTCATG 154534 || || | || ||||| || ||| | || ||| | | || ||||| || ||| | Sbjct 2893 CAGGTAGCTCTTCTCGAGTGTCTTGAAGCCAAAAAAGTCATAATCAAAGTCGCGCTTGTA 2952 Query 154535 AGCGATGGCCGCATCGAG 154552 ||||||| || ||||| Sbjct 2953 GTCGATGGCAGCCTCGAG 2970 >seq8653 Length=1535 Score = 107 bits (118), Expect = 2e-18 Identities = 162/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || || || | ||||| || || || | | | |||||||| |||||||||||||||| Sbjct 194 CCTCCACGGAGACGCAGCACCAAGTGGAGGGTAGACTCCTTCTGAATGTTGTAGTCGCCG 253 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | ||| || ||| || ||||| || |||| | |||| | ||| ||||| || || || Sbjct 254 AGAGTGCGACCGTCTTCAAGTTGCTTGCCGGCAAAGATCAAACGTTGTTGATCGGGTGGG 313 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTG-TTTTAATTGTTCCACGGTGTCGGTCGACTCCAC 138566 |||||||||||||| ||| | |||| || | | || | ||||| | ||| || Sbjct 314 ATACCTTCTTTGTC-TTGAATCTTTGCCTTGACGTTCTCGATAGTGTCAGAGCCCTCGAC 372 Query 138567 CTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 ||| | || | || || ||||||| || |||||||| || ||||| Sbjct 373 CTCTAGTGTGATGGTCTTTCCAGTCAATGTCTTTACAAAGATTTGCAT 420 Score = 86.0 bits (94), Expect = 6e-12 Identities = 134/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 138423 CTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATA 138482 |||||| |||||||||||||| | | ||||| |||||||| || || |||| | | Sbjct 1 CTCCTTCTGAATGTTGTAGTCACCGAGGGTACGACCATCCTCGAGCTGCTTGCCGGCAAA 60 Query 138483 GATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTG 138542 ||| |||||||| || || || || || || || || || ||| || || | | Sbjct 61 GATGAGACGCTGCTGATCGGGTGGGATTCCCTCCTTATCTTGGATCTTGGCCTTGACGTT 120 Query 138543 TTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTAC 138602 || | ||||| | ||| ||||||| || | || || ||||| ||||| || || Sbjct 121 CTCGATAGTGTCAGAGCCCTCAACCTCGAGGGTGATAGTCTTGCCAGTGAGAGTCTTCAC 180 Query 138603 AAAAATCTGCAT 138614 ||| |||||||| Sbjct 181 AAAGATCTGCAT 192 >seq1351 Length=12664 Score = 100 bits (110), Expect = 3e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || || || | ||| | ||| || || | | | ||||||||||||||||||||||| | Sbjct 4702 CCTCCACGGAGACGAAGAACCAAGTGAAGGGTGGACTCCTTTTGAATGTTGTAGTCACCG 4643 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | || || ||||| ||||| || |||| | |||| | ||| || ||||| || || Sbjct 4642 AGGGTGCGTCCATCCTCAAGTTGCTTGCCGGCAAAGATCAAACGTTGCTGGTCGGGTGGG 4583 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCACC 138567 ||||| || ||||| ||| || || | | || | |||||||| ||| ||| Sbjct 4582 ATACCCTCCTTGTCCTGGATCTTGNNCTTGACGTTCTCGATGGTGTCGGATCCCTCGACC 4523 Query 138568 TCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 |||| || | || || ||||| || || || || || |||||||| Sbjct 4522 TCGAGGGTGATGGTCTTGCCAGTGAGGGTCTTGACGAAGATCTGCAT 4476 Score = 98.7 bits (108), Expect = 1e-15 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || || || | ||| | || || || | | | ||||||||||||||||||||||| | Sbjct 4930 CCTCCACGGAGACGGAGCACCAAGTGAAGGGTGGACTCCTTTTGAATGTTGTAGTCACCG 4871 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | || || ||||| || || || |||| | |||| |||||||| ||||| || || Sbjct 4870 AGGGTGCGTCCATCCTCAAGCTGCTTGCCGGCAAAGATGAGACGCTGCTGGTCGGGTGGA 4811 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCACC 138567 ||||| || ||||| ||| || || | | || | |||||||| ||| ||| Sbjct 4810 ATACCCTCCTTGTCTTGGATCTTGGCCTTGACGTTCTCGATGGTGTCGGATCCCTCGACC 4751 Query 138568 TCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 || | || | || || ||||| ||||| || ||||| || ||||| Sbjct 4750 TCCAGAGTGATGGTCTTTCCAGTTAGAGTCTTCACAAAGATTTGCAT 4704 Score = 91.5 bits (100), Expect = 1e-13 Identities = 150/214 (70%), Gaps = 2/214 (1%) Strand=Plus/Minus Query 138402 CAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTC 138461 ||| || || || | | | ||||||||||||||||| ||||||| | ||| || || Sbjct 5144 CAATACCAAGTGAAGGGTGGACTCCTTTTGAATGTTATAGTCGCCAAGAGTGCGACCATC 5085 Query 138462 CTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTC 138521 ||| || || || |||| | |||| |||||||| ||||| || || || || || ||||| Sbjct 5084 CTCAAGCTGCTTGCCGGCAAAGATGAGACGCTGCTGGTCGGGTGGGATTCCCTCCTTGTC 5025 Query 138522 GGTGATTTTTTG-TTTTAATTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCG 138580 ||| | || | || | | || | |||||| | ||| ||||| | || | | Sbjct 5024 -TTGAATCTTGGCCTTGACGTTCTCGATGGTGTCAGAGCCCTCAACCTCAAGTGTGATGG 4966 Query 138581 TTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 | || ||||| || || || || || |||||||| Sbjct 4965 TCTTGCCAGTGAGGGTCTTGACGAAGATCTGCAT 4932 >seq3381 Length=12314 Score = 93.3 bits (102), Expect = 4e-14 Identities = 137/194 (71%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 || |||||||| ||||||||||||| | ||| || |||||||| || || || | | Sbjct 1608 GATTCCTTTTGGATGTTGTAGTCGCCAAGAGTGCGGCCATCCTCGAGCTGCTTGCCAGCA 1549 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAAT 138540 |||| | |||||| ||||| || || ||||| || || || ||| ||| |||| Sbjct 1548 AAGATCAAACGCTGCTGGTCGGGTGGGATACCCTCCTTATCTTGGATCTTTGCCTTTACG 1489 Query 138541 TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 138600 | || | ||| || | || ||||||| || | || |||||||| ||||| || Sbjct 1488 TTCTCAATGGTATCAGAGCCTTCAACCTCGAGAGTGATAGTCTTACCAGTAAGAGTCTTG 1429 Query 138601 ACAAAAATCTGCAT 138614 || || |||||||| Sbjct 1428 ACGAAGATCTGCAT 1415 Score = 89.7 bits (98), Expect = 5e-13 Identities = 136/194 (70%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 || |||||||||||||||||||||| | |||||| ||||||||||| || |||| | Sbjct 1380 GATTCCTTTTGAATGTTGTAGTCGCCAAGAGTACGACCATCCTCGAGTTGCTTGCCGGCA 1321 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAAT 138540 |||| ||||| || || || || || ||||| || || || ||| || || | Sbjct 1320 AAGATGAGACGTTGCTGATCGGGTGGGATACCCTCCTTATCTTGGATCTTGGCCTTGACG 1261 Query 138541 TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 138600 | || | || || | ||| ||||||| || | || || || |||| ||| || Sbjct 1260 TTCTCGATAGTATCCGAACCCTCAACCTCGAGGGTGATAGTCTTTCCGGTCAAAGTCTTC 1201 Query 138601 ACAAAAATCTGCAT 138614 ||||| || ||||| Sbjct 1200 ACAAAGATTTGCAT 1187 Score = 84.2 bits (92), Expect = 2e-11 Identities = 137/195 (70%), Gaps = 2/195 (1%) Strand=Plus/Minus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 ||||| || || ||||||||||| | | ||||| || || | ||| || || | | Sbjct 1152 GACTCTTTCTGGATGTTGTAGTCACCGAGGGTACGACCATCTTCCAATTGCTTTCCAGCA 1093 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTG-TTTTAA 138539 | || |||||||| ||||| || || |||||||| ||||| ||| | || | || | Sbjct 1092 AAAATGAGACGCTGCTGGTCGGGTGGAATACCTTCCTTGTC-TTGAATCTTAGCCTTGAC 1034 Query 138540 TTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTT 138599 | || | |||||| | ||| ||||| | || | ||| || ||||| ||||| || Sbjct 1033 ATTCTCAATGGTGTCCGAGCCCTCAACCTCAAGAGTGATCGTCTTGCCAGTGAGAGTCTT 974 Query 138600 TACAAAAATCTGCAT 138614 ||||| |||||||| Sbjct 973 GACAAAGATCTGCAT 959 >seq3382 Length=4522 Score = 87.8 bits (96), Expect = 2e-12 Identities = 156/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || || || | ||| | || || || | | | ||||||||||| ||||||||||| Sbjct 4179 CCTCCACGGAGACGGAGCACCAAGTGAAGGGTGGACTCCTTTTGGATGTTGTAGTCAGAG 4120 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | ||||| |||||| | || || |||| | |||| |||||||| ||||| || || Sbjct 4119 AGGGTACGACCGTCCTCCAACTGCTTTCCGGCAAAGATGAGACGCTGCTGGTCGGGTGGG 4060 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCACC 138567 || || || ||||| ||| || || | | || | ||| |||| ||| ||| Sbjct 4059 ATTCCCTCCTTGTCTTGGATCTTGGCCTTGACGTTCTCGATGGTATCGGAACCCTCAACC 4000 Query 138568 TCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCATG 138615 || | || | || || || |||||||| || || ||||| |||||| Sbjct 3999 TCAAGGGTGATGGTCTTTCCGGTCAGAGTCTTGACGAAAATTTGCATG 3952 >seq4240 Length=2116 Score = 86.0 bits (94), Expect = 6e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || || || | ||| | || ||||| | |||||||||| || || |||||||| Sbjct 1441 CCTCCACGGAGACGGAGGACCAAATGGAGAGTTGACTCCTTCTGGATATTGTAGTCAGAG 1382 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | ||||| ||||| | || || |||| | |||| ||||| || ||||| || || Sbjct 1381 AGGGTACGACCATCCTCCAACTGCTTTCCGGCAAAGATGAGACGTTGCTGGTCGGGTGGA 1322 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCACC 138567 || || || ||||| ||| || || | | || | |||||| | ||| ||| Sbjct 1321 ATTCCCTCCTTGTCCTGGATCTTGGCCTTGACGTTCTCGATGGTGTCCGAGCCCTCGACC 1262 Query 138568 TCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 || | || | || |||||||| || |||||||| ||||||||||| Sbjct 1261 TCAAGGGTAATAGTCTTACCAGTGAGTGTTTTTACGAAAATCTGCAT 1215 >seq2999 Length=7307 Score = 82.4 bits (90), Expect = 8e-11 Identities = 101/138 (73%), Gaps = 0/138 (0%) Strand=Plus/Plus Query 57303 CTCGACGTTGCCCAAGTCGCCGACGTGCCGCACGGCCGCGTTGGGAGCGCCGTGTTCGCT 57362 |||||||||||| | |||||||||||| || || | | |||| || ||||||||| Sbjct 411 CTCGACGTTGCCAAGGTCGCCGACGTGGCGAACCTCGTTGGTGGGCGCACCGTGTTCGAG 470 Query 57363 GCCGGTGGGGTTAAAGTGCTCGCCCGCCGACGTGCAGCCGTTGCTGGTGTCGCCGAACTC 57422 | || ||||| |||| | || |||| | ||||||| | |||||| || ||||| Sbjct 471 GTCGTGCGGGTTGTAGTGTGCACCGGCCGCCATGCAGCCATCAGAGGTGTCTCCAAACTC 530 Query 57423 GTGAACGTGAAATCCGTG 57440 ||| ||||| || || || Sbjct 531 GTGTACGTGGAACCCATG 548 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496087300015440