Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acytostelium_20leptosomum_20[genbank_20GCA_5F900092245.1_202017-01- 02] 28,227 sequences; 57,256,845 total letters Query= NC_011589.1 Length=40287 Score E Sequences producing significant alignments: (Bits) Value seq27160 109 1e-19 seq1016 98.7 3e-16 >seq27160 Length=711 Score = 109 bits (120), Expect = 1e-19 Identities = 217/316 (69%), Gaps = 4/316 (1%) Strand=Plus/Minus Query 15794 CGTGATGGCCTTCTCGCGACGCTGCAGCAGCTGTCGGGTGAAGAACTCGCCCGGTTCCAG 15853 ||||| || || || | |||| |||| ||| |||||||| || || || |||||| Sbjct 328 CGTGACGGTCTGCTGGACGCGCTCCAGCGGCTCTCGGGTGAGGAGCTGCAGCGCTTCCAG 269 Query 15854 GGTGCGGCGCAGGCGGCATTCAGCTCGCTGCCGCAGGGGGCAGTGAACGCTGCGGCGGTG 15913 || |||||| | || || |||| ||| || |||| | || || |||||||| Sbjct 268 ATGGCCGCGCAGACAGCCTTTGAGGCGCTTCCGGGGGCGGCAATCAATGCGTCGGCGGTG 209 Query 15914 CTGCAGACCACTCTGCTTGCCGCGATGACCAAGCTGGGCGTGGCCTCGGGCCAGC-TGGG 15972 |||||| || ||| | ||||| || ||| ||||||| | | | ||| |||| Sbjct 208 CTGCAGCAGACGCTGGTAGCCGCTTTGCAGAAGTTGGGCGTCAACGC-CGAAAGCGTGGG 150 Query 15973 GGTCAGCTTCACCCAGGCAGGTCGGGATGCCATCGCTGCGTTCGGTGCCGTCACAGAGAA 16032 | | |||||| | || | || || || || |||||||| |||| || |||| || | Sbjct 149 GATGAGCTTCGGCAAGACCGGCCGCGACGCGATCGCTGCCTTCGCCACCATCACCGATAG 90 Query 16033 CGCCATTGCGACCGGCACGCAGATTGAGGCTGCGTTCAA-AGCTGCCTTGGGAAATGTGG 16091 ||| | | |||||| |||| | ||||| || ||||| ||| ||| | || |||||| Sbjct 89 CGCTCTGTCCACCGGCGTGCAGGTGGAGGCCGCATTCAAGAGC-GCCCTTGGCAATGTGT 31 Query 16092 CAACACTGGACGAGGC 16107 | || |||| ||||| Sbjct 30 CCACCTTGGATGAGGC 15 >seq1016 Length=5115 Score = 98.7 bits (108), Expect = 3e-16 Identities = 92/117 (79%), Gaps = 0/117 (0%) Strand=Plus/Plus Query 10063 TCCGGGCCTTGGGCAAGACCCTGCTCACCTACCAGCGCAAGCATGGCCTGCGAACGGTGA 10122 |||| ||| |||||||| ||||| ||||| ||||||||||| || | || |||| Sbjct 1281 TCCGTGCCCTGGGCAAGCTGCTGCTGACCTATCAGCGCAAGCACGGGTTAAAGACCGTGA 1340 Query 10123 AGGAGATCATCGGTCGCTGGGCGCCACCGGTGGAGAACAACACCACCGCATACGTGC 10179 ||| ||||||| ||||||||||||| | ||||||||| | ||| | || ||||||| Sbjct 1341 AGGCGATCATCAGTCGCTGGGCGCCGTCCGTGGAGAACGATACCGCTGCCTACGTGC 1397 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 128753627876126