Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acytostelium_20leptosomum_20[genbank_20GCA_5F900092245.1_202017-01- 02] 28,227 sequences; 57,256,845 total letters Query= NC_012740.1 Length=166418 Score E Sequences producing significant alignments: (Bits) Value seq3869 159 4e-34 >seq3869 Length=8584 Score = 159 bits (176), Expect = 4e-34 Identities = 289/421 (69%), Gaps = 4/421 (1%) Strand=Plus/Plus Query 139678 CATCAGGTTATTAATCTGTACGCCGTAATCAAGATGACGAATGCGGTTATCTTCCACCCC 139737 |||||| || || |||||||| ||||| || | ||||||| |||||| | || || Sbjct 4353 CATCAGCTTGTTGATCTGTACCCCGTAGTCCATGTGACGAACGCGGTTGGCGTCGGTACC 4412 Query 139738 CTTATTGTTCTTTAACACAATCAGACTTTCAAACTCTAAATGCCATATTGGGTAATAGAG 139797 ||||| || | ||| | ||| ||||| | || | |||||| |||||||| |||| Sbjct 4413 ACGGTTGTTTTTCAGCACCAGCAGGCTTTCCACTTCCAGATGCCACATTGGGTAGAAGAG 4472 Query 139798 AGTCGCCGCCCCGCCACGAATGCCGCCTTGTGAGCATGACTTAACGGCCGTCTGAAAATG 139857 || ||||| ||||| || | |||||| || ||||| || || || || ||||| ||||| Sbjct 4473 GGTTGCCGCGCCGCCGCGCACGCCGCCCTGCGAGCAGGATTTCACCGCGGTCTGGAAATG 4532 Query 139858 TTTCCAGAATGGGATAACGCCAGTATGACGAA--CTTCACCATGCCCGATCTTAGATCCT 139915 || |||| || || ||| || || ||| |||| || | |||| || Sbjct 4533 CTTGTAGAACGGAATGCAGCCGGTGTG--GAAGGCTTCGCCGCCGCGGATCGGGCTGCCC 4590 Query 139916 TCCGCGCGAATCATGCCAGCGTTGATACCGATACCAGCACGCTTGCTAATATACTTGATG 139975 ||||||||| || |||||||| ||||| || || |||| | || || || | Sbjct 4591 AGCGCGCGAATGCGCCCGGCGTTGATGCCGATGCCGGCGCGCTGGGAAACGTATTTCACA 4650 Query 139976 ATTGCATTTGCTGTTTCGTTGATGCCCTGCAATGAGTCATCACTTTCGATCACCACACAC 140035 || || | | || |||||||| | || ||| | | ||||||| ||| || Sbjct 4651 ATCGCGCTGGAGGTGGCGTTGATGGAATCCAGGCTGTCGCCGCACTCGATCAGCACGCAG 4710 Query 140036 GAACTAAATTGGCGTGTTGGGGTACGCACACCTGCCATAATCGGAGTAGGTAGAGAGATT 140095 || || || || || |||||||||||||| || | ||| ||||| || || || |||||| Sbjct 4711 GAGCTGAACTGACGGGTTGGGGTACGCACGCCGGACATGATCGGCGTCGGCAGCGAGATT 4770 Query 140096 T 140096 | Sbjct 4771 T 4771 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 532221745927760