Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acytostelium_20leptosomum_20[genbank_20GCA_5F900092245.1_202017-01- 02] 28,227 sequences; 57,256,845 total letters Query= NC_013085.1 Length=194454 Score E Sequences producing significant alignments: (Bits) Value seq19411 100 4e-16 seq102 93.3 5e-14 >seq19411 Length=388 Score = 100 bits (110), Expect = 4e-16 Identities = 66/73 (90%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 176306 TGGAGAATAGGAGACTCGAACTCCTGACAGCCTGCTTGCAAAGCAGGTGCTCTACCAACT 176365 ||||| ||||||| |||||||||||||| ||||||||||||||||| |||||||||||| Sbjct 112 TGGAGCCTAGGAGATTCGAACTCCTGACATCCTGCTTGCAAAGCAGGCGCTCTACCAACT 53 Query 176366 GAGCTAATTCCCC 176378 ||||||| |||| Sbjct 52 GAGCTAAGGCCCC 40 >seq102 Length=326246 Score = 93.3 bits (102), Expect = 5e-14 Identities = 75/88 (85%), Gaps = 2/88 (2%) Strand=Plus/Minus Query 31291 GCGGAGAGGGTGGGATTCGAACCCACGG-AGGCTTTCACCT-CGCTAGTTTTCAAGACTA 31348 |||||| ||||||||||||||||||||| ||||| |||||| ||| ||||||||||| Sbjct 107298 GCGGAGGGGGTGGGATTCGAACCCACGGTAGGCTCTCACCTACGCCGGTTTTCAAGACCG 107239 Query 31349 GAGCCTTCAACCACTCGACCACCTCTCC 31376 | ||||| |||| |||| ||||| |||| Sbjct 107238 GTGCCTTAAACCGCTCGGCCACCCCTCC 107211 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 621905291040880