Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acytostelium_20leptosomum_20[genbank_20GCA_5F900092245.1_202017-01- 02] 28,227 sequences; 57,256,845 total letters Query= NC_014459.1 Length=59798 Score E Sequences producing significant alignments: (Bits) Value seq19823 118 4e-22 >seq19823 Length=496 Score = 118 bits (130), Expect = 4e-22 Identities = 232/337 (69%), Gaps = 6/337 (2%) Strand=Plus/Minus Query 54755 CATCAACGCGCACCACAACTACACGCAAAAGGAGCGGCACGGCGACCGTGATGTGTGGCT 54814 ||||||| |||||||||| ||| | |||| |||| || | |||||| | Sbjct 362 CATCAACTGCCACCACAACTTCACCGAGTCGGAGAAGCACTACGGGAAGCAGGTGTGGGT 303 Query 54815 GACCCGTAAGGGGGCGATCGACGCGAACGCCGGTGTGCGGGGCCTGATTCCGGGCTCGAT 54874 | | || ||||| || ||| | ||| |||||||| | |||||| || || || ||||| Sbjct 302 GTCACGGAAGGGAGCCATCCAGGCGGACGCCGGTCGACCGGGCCTCATCCCCGGGTCGAT 243 Query 54875 GGGCACCTGTTCGTATGTCGTG-ACCGGCAAGGGTAATCCCG-AGGCGTTGTGCTCGGCG 54932 ||| ||| || || || ||| | ||| || | |||| || || || ||| | Sbjct 242 GGGGACCGCCTCTTACGTGGTGGAAGGGCTCGGCGA--CCCGCAGTCGCTGAACTCCTCC 185 Query 54933 CCGCACGGTGCGGGCCGCCGGTTCTCGCGCACGAAGGCGCGCAAGCTGTTCACGGTCGAC 54992 ||||||||||| || || || ||| ||| || |||||| | |||||| |||| Sbjct 184 CCGCACGGTGCCGGACGGGAGTACTCCCGCTCGGCGGCGCGGCGGACCTTCACGCACGAC 125 Query 54993 GACCT-CGAGGCGCGTATGGCGGGCATCGAGTACCGCAAGGGCGAGGCGTGGGTCGACGA 55051 | || |||| ||| ||| |||||||||||| ||| | ||| || | ||||||| Sbjct 124 CAGCTGCGAGAGGCG-ATGACGGGCATCGAGTTCCGTGACACCGATGCCTTCATCGACGA 66 Query 55052 GATTCCCGACGCATACAAGCCGATCGACGTCGTGATG 55088 ||| || | || ||||||||||||||| |||||| Sbjct 65 GATCCCGCAGGCGTACAAGCCGATCGACCAGGTGATG 29 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 191167899870240