Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acytostelium_20leptosomum_20[genbank_20GCA_5F900092245.1_202017-01- 02] 28,227 sequences; 57,256,845 total letters Query= NC_014649.1 Length=1181549 Score E Sequences producing significant alignments: (Bits) Value seq2036 152 4e-31 seq19 143 2e-28 seq7273 102 6e-16 seq10595 89.7 4e-12 seq2 86.0 5e-11 >seq2036 Length=5547 Score = 152 bits (168), Expect = 4e-31 Identities = 455/696 (65%), Gaps = 12/696 (2%) Strand=Plus/Plus Query 518021 CGATTATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAA 518080 || ||||| ||||| ||||||||||| | ||| | || | || || | || | || Sbjct 29 CGGTTATCGAAATCCTCACCTCCCAAGTGAGTGTCACCAGCGGTGGCCTTGACCTCAAAG 88 Query 518081 AGTCCATCTTCAA--GAGACAAAAGAGTTACATCATGGGTTCCACCACCCATATCAAAAA 518138 | ||||| |||| | || |||||| ||||| || |||||||||| ||| || | Sbjct 89 ACACCATCCTCAATGGTGAGCAAAGAG--ACATCGAACGTACCACCACCCAAATCGAAGA 146 Query 518139 TAAGTACATTCATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAG 518198 | || | | || | | || || || ||||| || |||| || || |||| Sbjct 147 TGAGGATGTGACGCTCGGAGGTTGACTTCTTCTCGAGACCGTAGGCAATGGCGGCGGCAG 206 Query 518199 TTGGTTCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGG 518258 |||| || || || || | | || || || ||||| || ||||| || |||| Sbjct 207 TTGGCTCGTTGATGATACGCTGGACGTTGAGCTTGGCAATGACACCGGCATCCTTGGTGG 266 Query 518259 CTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCAGTTACTTCTT 518318 |||| | || || ||||| || || || || ||||| || ||||| | || | | Sbjct 267 CTTGACGCTGGGAGTCGTTGAAGTAGGCTGGGACAGTGATGACGGCGTTGTCGACGTTCT 326 Query 518319 TACCAATATAAGCGCTTGCCGTTTGTTTCATTTTACTTAAAATCATTGATGAAATTTGTT 518378 | || | || || || || | ||||| || | | ||| | || |||| | Sbjct 327 TGCCGAGGTAGGCTTCGGCAGTCTCCTTCATCTTGAGGAGCACCATGGCAGAGATTTCCT 386 Query 518379 CTGGGGAATATTGCTTGGATTCATT-TTGATATGATACTTCAAAATATGGTTTATTACCA 518437 ||||||| | ||||| ||| |||| | |||| | ||| || | | Sbjct 387 CTGGGGAGAAGGTCTTGGTCTCACCCTTGAACTCG-ACTTGGATGAGTGGCTTGT---CT 442 Query 518438 ACATTA---ATAACTTTAAATGGCCAGTATTTCATATCTGATTGAACACTTTGGTCATTA 518494 | || || || || |||||||||| |||||||| || || || |||| | Sbjct 443 TCCTTGGAGATGACCTTGAATGGCCAGTGCTTCATATCCGACTGCACGACAGAGTCACTG 502 Query 518495 AAATCTCTACCAATTAATCGTTTTGCATCAAAAATAGTATTGGTTGGATTAATTGCAGCT 518554 || | | |||||| || || || || ||||| | ||| |||||||| || || ||| | Sbjct 503 AACTTGCGACCAATCAAACGCTTGGCGTCAAAGACAGTGTTGGTTGGGTTCATGGCAACC 562 Query 518555 TGATATTTGGCTGCATCTCCAATCAGATGTTCTGTCTCTGTAAATGAAACATATGATGGA 518614 || | ||||| ||||||||||| ||| | || || ||||| || | || || |||||| Sbjct 563 TGGTTCTTGGCGGCATCTCCAATGAGACGCTCAGTGTCTGTGAAGGCGACGTACGATGGA 622 Query 518615 GTTGTGCGATTACCTTGATCATTCGCAATAATTTCAACTTTACCATTTTGCCATACACCT 518674 || || | ||||| ||||| || ||||| || || || | |||||||||| || || Sbjct 623 GTAGTTCTGTTACCCTGATCGTTGGCAATGATCTCGACACGATCATTTTGCCAAACTCCG 682 Query 518675 ACACAACTAAAAGTTGTTCCTAAATCAATACCAATA 518710 ||||| | ||||| |||||||| || || ||| Sbjct 683 ACACACGAGTATGTTGTACCTAAATCGATTCCTATA 718 >seq19 Length=770976 Score = 143 bits (158), Expect = 2e-28 Identities = 253/366 (69%), Gaps = 7/366 (2%) Strand=Plus/Minus Query 518027 TCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCA 518086 ||||| || ||||| |||| | |||| || || | | |||||| |||| ||| Sbjct 316629 TCAAAGTCATCACCACCCAGGTGGGTATCACCGTCAGTTGATTTTACTTCAAAAACACCA 316570 Query 518087 TCTTCAAGAGACAAAAGAGTTACATCATGGGTTCCACCACCCATATCAAAAATAAGTACA 518146 || | || ||| | || || ||||| || |||||||| ||||| | || | Sbjct 316569 TCACCCAGTTCCAATACAGAAACGTCATGTGTACCACCACCACAGTCAAACACAACAATT 316510 Query 518147 TTCATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCA 518206 ||||| ||||||| | |||||| | |||||| || ||||| || ||||| ||||| Sbjct 316509 TTCATGTCTTTGTGTGC---TTTATCCAAACCATAGGCTAAAGCCGCTGCAGTAGGTTCG 316453 Query 518207 TTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTT 518266 ||||| || || ||| | | ||| ||||| || || ||||| || || || | | Sbjct 316452 TTAATGATCCTTTTTACAGTTAAACCTGCAATCTCACCAGCCTCTTTTGTAGCCTGACGT 316393 Query 518267 TGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCAGTTACTTCTTTACCAATA 518326 |||| || || ||||| |||||||| || || || || ||||||||||| | ||| || Sbjct 316392 TGTGCGTCATTGAAATAAGCAGGAACTGTGATCACAGCTTCAGTTACTTCCTGACC--TA 316335 Query 518327 TAAGCGCTT--GCCGTTTGTTTCATTTTACTTAAAATCATTGATGAAATTTGTTCTGGGG 518384 || ||| || |||| ||||||||| | |||||||| ||||| | || ||| | Sbjct 316334 AAAAGTCTTCGGCAGTTTTTTTCATTTTCTGCAGAATCATTGCAGAAATCTCTTGTGGAG 316275 Query 518385 AATATT 518390 ||||| Sbjct 316274 TATATT 316269 >seq7273 Length=4713 Score = 102 bits (112), Expect = 6e-16 Identities = 101/131 (77%), Gaps = 0/131 (0%) Strand=Plus/Minus Query 518174 AGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATTAAGACCA 518233 ||||| || |||| ||||| ||||||||||| || || |||| | ||||| |||||| Sbjct 525 AGACCGTAGGCAATGGCAGCTGCAGTTGGTTCGTTCATGATTCGCTGTACATTCAGACCA 466 Query 518234 GCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCAGGAACA 518293 ||||| | ||||| |||||||| || |||| ||||| ||||||||| | || || || Sbjct 465 GCAATAGTCCCTGCGTCTTTAGTAGCCTGTCGTTGTGCATCGTTAAAGTGCGCCGGCACT 406 Query 518294 GTAATAACGGC 518304 || || || || Sbjct 405 GTGATGACAGC 395 >seq10595 Length=2791 Score = 89.7 bits (98), Expect = 4e-12 Identities = 146/210 (70%), Gaps = 8/210 (4%) Strand=Plus/Plus Query 518504 CCAATTAATCGTTTTGCATCAAAAATAGTATTGGTTGGATTAATTGCAGCTTGATATTTG 518563 ||||| | || || |||||||| || || |||| |||||| ||||| | || | ||| Sbjct 254 CCAATGAGTCTCTTGGCATCAAAGATGGTGTTGGATGGATTCATTGCCACCTGGTTCTTG 313 Query 518564 GCTGCATCTCCAATCAGATGTTCTGTC----TCTGTAAATGAAACATATGATGGAGTTGT 518619 || ||||| || ||||| ||| || || | |||| ||||| |||||| || Sbjct 314 GCAGCATCACCGATCAG----TCTCTCGACATCGTTGAATGCGACATAACTTGGAGTAGT 369 Query 518620 GCGATTACCTTGATCATTCGCAATAATTTCAACTTTACCATTTTGCCATACACCTACACA 518679 || || || || |||| ||| || || ||| || |||||||||||||| ||||| Sbjct 370 CTTGTTGCCCTGGTCGTTCGGAATGATCTCTACTCTATTGTTTTGCCATACACCAACACA 429 Query 518680 ACTAAAAGTTGTTCCTAAATCAATACCAAT 518709 | ||||| || | ||||||||||| Sbjct 430 TGAGTATGTTGTACCAAGGTCAATACCAAT 459 >seq2 Length=372010 Score = 86.0 bits (94), Expect = 5e-11 Identities = 112/155 (72%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 322238 CCTAAACCGTATGCAAGAGCTGCTGCAGTTGGTTCATTAATTATTTTAAGAACATCTAAA 322297 |||||||| || ||||| |||||||||||||||||| | ||| | ||||| || Sbjct 293845 CCTAAACCATAGGCAAGGCTTGCTGCAGTTGGTTCATTGACTATACGTAATACATCCAAT 293904 Query 322298 CCCGCAATTTTAGCAGAATCAAGAGTTGCTTGTCTCTGTGCGTCATTAAAATATGCTGGT 322357 || || | ||| | | |||| | || || || | ||| |||||||||||| || || Sbjct 293905 CCGGCCAGTTTGCCGGCATCACGTGTAGCCTGACGCTGGCTGTCATTAAAATAAGCAGGA 293964 Query 322358 ACAGTAATAACTGCTTTATTAATAGGTTTTTGTAA 322392 |||||||| ||||| |||| ||| ||| ||| Sbjct 293965 ACAGTAATGACTGCCCGGTTAACTGGTGTTTTTAA 293999 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3779421683280262