Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acytostelium_20leptosomum_20[genbank_20GCA_5F900092245.1_202017-01- 02] 28,227 sequences; 57,256,845 total letters Query= NC_014661.1 Length=164093 Score E Sequences producing significant alignments: (Bits) Value seq3869 140 3e-28 >seq3869 Length=8584 Score = 140 bits (154), Expect = 3e-28 Identities = 294/437 (67%), Gaps = 6/437 (1%) Strand=Plus/Plus Query 141456 TTGATTTGAAGGCCATAATCCATGTGACGAATACGGTTTTCTTCAACACCTTTGTTGTTC 141515 ||||| || | || || ||||||||||||| ||||| | || ||| |||||| Sbjct 4363 TTGATCTGTACCCCGTAGTCCATGTGACGAACGCGGTTGGCGTCGGTACCACGGTTGTTT 4422 Query 141516 TTCAACACAATCAAGTTTTCCACTTCAAGGTGCCACATAGGGAAGAACATTGTTGCCGAA 141575 |||| ||| | || | |||||||||| || |||||||| ||| |||| | ||||||| Sbjct 4423 TTCAGCACCAGCAGGCTTTCCACTTCCAGATGCCACATTGGGTAGAAGAGGGTTGCCGCG 4482 Query 141576 CCTTTACGAATACCACCTTGAGAACAGCAATGAACCGCTGAGTTAAAGTGCTTCCAGAAA 141635 || || | || || || || ||| | | ||||| | | || ||||| |||| Sbjct 4483 CCGCCGCGCACGCCGCCCTGCGAGCAGGATTTCACCGCGGTCTGGAAATGCTTGTAGAAC 4542 Query 141636 GGTACTACGCCAGTGTGTTTGACTTCGCCTGGGCCAATTTTCGAACCTTCAGCTCGAATC 141695 || | ||| ||||| | ||||||| || || || || ||||| Sbjct 4543 GGAATGCAGCCGGTGTGGAAGGCTTCGCCGCCGCGGATCGGGCTGCCCAGCGCGCGAATG 4602 Query 141696 ATGCCTGCGTTAATCCCGATACCTGCTCGCTTAGAAACATACTTAACAATAGCA---GAG 141752 || ||||| || ||||| || || |||| ||||| || || ||||| || ||| Sbjct 4603 CGCCCGGCGTTGATGCCGATGCCGGCGCGCTGGGAAACGTATTTCACAATCGCGCTGGAG 4662 Query 141753 TTTGCATCATTGATTGAGTCAAGGCTGTCACCAGATTCAATAACTACACATGAACTGAAT 141812 | || | |||| || || |||||||| || | || || | || || || ||||| Sbjct 4663 GTGGCGT---TGATGGAATCCAGGCTGTCGCCGCACTCGATCAGCACGCAGGAGCTGAAC 4719 Query 141813 TGACGAGTTGGGGTACGAACACCAGCCATAATTGGAGTAGGCAACGAGATTTTACGAGTT 141872 ||||| ||||||||||| || || | ||| || || || |||| |||||||||| || Sbjct 4720 TGACGGGTTGGGGTACGCACGCCGGACATGATCGGCGTCGGCAGCGAGATTTTAAAGGTG 4779 Query 141873 GAAACAGCTTCATAAAA 141889 || || || || || || Sbjct 4780 GACACCGCGTCGTAGAA 4796 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 524784371038760