Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acytostelium_20leptosomum_20[genbank_20GCA_5F900092245.1_202017-01- 02] 28,227 sequences; 57,256,845 total letters Query= NC_014662.1 Length=165540 Score E Sequences producing significant alignments: (Bits) Value seq2516 125 8e-24 seq2261 102 9e-17 >seq2516 Length=21774 Score = 125 bits (138), Expect = 8e-24 Identities = 132/174 (76%), Gaps = 0/174 (0%) Strand=Plus/Minus Query 62001 GGTGAAAGTACGTGCAATAACGTCACGCTGCTGTTCTGACGTCAGAGAATTAAATCGGAC 62060 ||| || ||||| || || ||||| ||||||||||| | ||||||||| || || || || Sbjct 1949 GGTAAAGGTACGGGCGATTACGTCGCGCTGCTGTTCCGGCGTCAGAGAGTTGAAGCGTAC 1890 Query 62061 AGCATAACCAGAAACACGAATAGTCAGCTGAGGATATTTTTCTGGATGTTGAACTGCATC 62120 || || || ||||||||||| |||||||| ||||||||||| ||||| | ||| || || Sbjct 1889 CGCGTAGCCGGAAACACGAATGGTCAGCTGCGGATATTTTTCCGGATGCTCAACCGCGTC 1830 Query 62121 TTCTAAAGTTTCTTTAGTCAGAACATTCACGTTCAGATGTTGGCCACCTTCAAC 62174 | ||||| | ||| || || |||||||| || || || ||||| || Sbjct 1829 CAGCAGGGTTTCGCGACGCAGCACGTTAACGTTCAGGTGCTGACCGCCTTCGAC 1776 >seq2261 Length=3986 Score = 102 bits (112), Expect = 9e-17 Identities = 133/184 (72%), Gaps = 0/184 (0%) Strand=Plus/Minus Query 61988 ATTACATTTCCTTGGTGAAAGTACGTGCAATAACGTCACGCTGCTGTTCTGACGTCAGAG 62047 ||||||| || ||||| ||||| | |||||| || ||||||||||| ||||| | Sbjct 688 ATTACATGGTCTGAGTGAAGGTACGGGTAATAACATCCTGCTGCTGTTCTTTGGTCAGGG 629 Query 62048 AATTAAATCGGACAGCATAACCAGAAACACGAATAGTCAGCTGAGGATATTTTTCTGGAT 62107 | ||||| || || || || ||||| ||||| || |||||||| ||||||||||| || | Sbjct 628 AGTTAAAACGTACGGCGTAGCCAGATACACGGATGGTCAGCTGCGGATATTTTTCCGGGT 569 Query 62108 GTTGAACTGCATCTTCTAAAGTTTCTTTAGTCAGAACATTCACGTTCAGATGTTGGCCAC 62167 || | || || | |||| ||| || ||||||||||| || || |||| Sbjct 568 TTTCCATCGCGTCGAGCAGCATTTCGCGGTTCATGACGTTCACGTTCAGGTGCTGACCAC 509 Query 62168 CTTC 62171 |||| Sbjct 508 CTTC 505 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 529413137260000