Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acytostelium_20leptosomum_20[genbank_20GCA_5F900092245.1_202017-01- 02] 28,227 sequences; 57,256,845 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq13335 185 1e-41 seq11521 161 1e-34 seq271 113 6e-20 seq1043 107 2e-18 seq19281 105 8e-18 seq3843 100 4e-16 seq4933 91.5 2e-13 seq3533 91.5 2e-13 seq2691 86.0 8e-12 >seq13335 Length=4250 Score = 185 bits (204), Expect = 1e-41 Identities = 480/722 (66%), Gaps = 11/722 (2%) Strand=Plus/Minus Query 111509 GGATGACATTGACACGAAGAGAGACTACGACTTTGGTTATTTTGGTCTCAAGACCCTCGA 111568 || || ||| ||| ||| | |||| || | || | |||||| ||||||| ||||| Sbjct 2965 GGCTGCCATCGACTACAAGCGCGACTTTGATTATGACTTTTTTGGCTTCAAGACACTCGA 2906 Query 111569 GAAAAGCTACCTCCAAAGACTGGATGGTGTCTTGATGGAAACCCCACAGTACATGTTCAT 111628 ||| |||||||| || | | || | | | || || ||| ||||| | || Sbjct 2905 GAAGAGCTACCTGCAGCGCATCGACAACGAGATTGTCGAGCGTCCCCAGCACATGCTGAT 2846 Query 111629 GCGGGTCGCGATCGGTATCCATGGGGAAGATATTGATTCTGTTTTGGAGACATACGACAA 111688 ||| || ||||||| ||||| || || ||||| | | | | || ||||| Sbjct 2845 GCGTGTGTCGATCGGCATCCACGGCCGCGACATTGACGCCGCCATCCACACCTACGAGCT 2786 Query 111689 GATGTCCCGTGGTATGTTCATCCACGCAACACCAACCCTCTTCAACGCTGGTACACCAAG 111748 | |||| ||| | |||||| || || || || || || |||||| | || || |||| Sbjct 2785 GCTGTCGCGTCGCCTGTTCACGCATGCCACGCCCACGCTGTTCAACTCGGGCACGCCAAT 2726 Query 111749 ACCCCAAATGTCCAGTTGTTTCCTTATTGCAAAC-AAGGAGGATTCAATCAATGGCATTT 111807 ||||| ||||| || ||||| | ||| | ||||| || || ||| |||| || | Sbjct 2725 GCCCCAGATGTCGTCATGCTTCCTGGT-GCAGATGAAGGACGACTCTATCGATGGAATCT 2667 Query 111808 ACGGCACTCTCACTGAATGTGCCCAAATCTCAAAGTGGGCTGGTGGTATCGGGATGCACA 111867 ||| ||||| | | || || ||| |||| ||| || || ||||| || Sbjct 2666 ACGATACTCTGAAGCAGTGCGCATTGATCAGCAAGTCGGCCGGAGGCATCGGTTTGTCGG 2607 Query 111868 TCCATGATGTCAGAGCCAACAAGTCTCGTA--TTAGAGGTACAAATGGTCAATCAGATGG 111925 | || | || | ||| | | |||||| | | || || || ||| || | || Sbjct 2606 TGCACAAGATCCGTGCCG-CGCG-CTCGTACATCCGCGGCACCAACGGTACCTCGAACGG 2549 Query 111926 TATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGTAAACCAAGCTGGGCG 111985 | |||||||||| || || ||||||| ||| || || ||||| |||| | ||| | Sbjct 2548 ACTGGTTCCAATGCTGCGTGTCTTTAACGACACTGCACGTTATGTTGACCAGGGTGGCGG 2489 Query 111986 T---CGCAAGGGATCTATCGCAGTCTATCTTGAGCCATGGCACGCGGATATCATGGAGTT 112042 |||||||| | | || |||| || |||||||||||||| || ||||||||||| Sbjct 2488 CAAGCGCAAGGGCGCCTTTGCCATCTACCTGGAGCCATGGCACGCCGACATCATGGAGTT 2429 Query 112043 CCTTGAGTTGCGTCTCAACCAAGGTGATGAGGAGGCGCGGTGC-CGCGATCTCTTCTCCG 112101 |||||| |||| ||||| || | |||||| || |||| ||||| ||||||| || Sbjct 2428 CCTTGACCTGCGCAAGAACCACGGCAAGGAGGAGATGC-GTGCTCGCGACCTCTTCTACG 2370 Query 112102 CTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAGAGTGGCAATTGGTCTCTCT 112161 | |||||||| | || | || ||| || | ||||||| | | | | ||||| |||| Sbjct 2369 CACTCTGGATCTCTGACTTGTTTATGCAGCGCGTTGAGGCCAACGCCGACTGGTCACTCT 2310 Query 112162 TTTGTCCAGACAAGGCACCCGGTCTCTCCGATGCCGTGGGTGAGGAGTTTGAAGCCCTCT 112221 | || || || |||| || || || |||| || ||| ||| |||| | | |||| Sbjct 2309 TCTGCCCGAACGAGGCGCCAGGCCTTGCCGACACCTGGGGCGAGAAGTTCAACGAACTCT 2250 Query 112222 AC 112223 || Sbjct 2249 AC 2248 >seq11521 Length=1534 Score = 161 bits (178), Expect = 1e-34 Identities = 259/371 (70%), Gaps = 6/371 (2%) Strand=Plus/Plus Query 176699 CTTGGCCAGAAGTAGTGAATCATATTGAGAATGAGACCCTTGATGTGGGAACCGTCGTTA 176758 || ||||| |||| |||||||| |||| | | |||||||||||||||||| |||| | Sbjct 319 CTCGGCCAAAAGTGGTGAATCAAGTTGATGAGCAAACCCTTGATGTGGGAACCATCGTGA 378 Query 176759 TCGGCATCCGTCATGATCATGAGACGACCATACCGAAGCTCGGAAACATCTTGATAGTCC 176818 || ||| ||||||||||| ||| | || || || ||| || || | || ||| Sbjct 379 TCTTGATCAGTCATGATCATCAGATGGCCGTAGCGGAGCGACTTGACGTCGTCGTACTCC 438 Query 176819 TTACCCTGTTGAAGACCCAAGATCTTCTTGAGATCGTTGAACTCTTGGTTTGA---TGTG 176875 || || || || ||||||| ||| | | | ||||| ||||| |||||| || Sbjct 439 TTGCCGTGCTGCAGACCCATGATGGTGACAATGTTGTTGATCTCTTCGTTTGACATTGAA 498 Query 176876 AGCTGTGTGACAGAGGCATCACGAACATTCTTACACTTCCCACGAAGAGGGAAGACACCG 176935 | ||| | || ||||| |||||| ||| || ||||||||| ||| Sbjct 499 TCACGGGTGGCTGA---CTCACGCACATTCAGCAGCTTACCCTTGAGAGGGAAGCATCCG 555 Query 176936 TAGTGATCGCGACCAACCACAGAGAGACCCGCAACCGCGAGCGTTTTCGCAGAATCACCC 176995 ||||| || | || |||||| || ||| || || || || || || |||||||| ||| Sbjct 556 TAGTGGTCCCATCCCACCACACTGATACCGGCGACTGCCAGAGTCTTGGCAGAATCTCCC 615 Query 176996 TCTGTCACGATGAGTGTACACTTGCCAGATTGTGCCGTACCCGCCTTGTTCGCATCATCC 177055 ||||||| ||| | |||||||| | | |||| ||||| || ||| ||| || || ||| Sbjct 616 TCTGTCAAGATCAATGTACACTCGTCTGATTTGGCCGTTCCTGCCAAGTTTGCTTCGTCC 675 Query 177056 AATTTGGGAAT 177066 || ||||| || Sbjct 676 AACTTGGGTAT 686 >seq271 Length=183270 Score = 113 bits (124), Expect = 6e-20 Identities = 217/314 (69%), Gaps = 12/314 (4%) Strand=Plus/Plus Query 15972 TCAAAACCATCCATCTCTGTCAAAAGCTGGTTAATAGTTTGTTCCCGTTCATCATTCGCT 16031 || |||||||||||||| || |||||||| | || ||||| ||||| ||||| || Sbjct 18052 TCGAAACCATCCATCTCGACCAGCAGCTGGTTCAGCGTCTGTTCGCGTTCGTCATT-GCC 18110 Query 16032 GGCATAC-CACCAGCACTGCGTTGCTTTCCCACGGCATCAATCTCATCAATGAAGACGAT 16090 | | | ||| || | ||| || || || ||||| || || || ||||||| ||| Sbjct 18111 GCCGCCCAGACCGGCGCCGCGATGACGGCCGACCGCATCGATTTCGTCGATGAAGATGAT 18170 Query 16091 GCATGGTTGATT----TTCGCGAGCGACTTCAAAGAGATCCCGTACACGCTTGGCGCCCA 16146 ||| ||| ||| ||||| | ||| || | || || |||||| || || | Sbjct 18171 GCAGGGTGCATTCTTCTTCGCCTG----TTCGAACATGTCACGCACACGCGATGCACCGA 18226 Query 16147 CACCAACAAACATCTCCACAAAGTTTGCGGCGGAACATTG-GATGAAGGGGACATTAGAT 16205 |||| || ||||| || || |||| | ||| | || | || ||| || ||||| | | Sbjct 18227 CACCGACGAACATTTCAACGAAGTCGGAACCGG-AGATGGTGAAGAACGGCACATTGGCT 18285 Query 16206 TCACCCGCAATGGCTCGGGCGAGAAGAGTCTTACCCGTACCTGGCTTACCCGCGAGGAGG 16265 ||||| || ||||| || || ||||| |||||||| ||||| || ||| |||| || Sbjct 18286 TCACCGGCGATGGCGCGCGCCAGAAGCGTCTTACCGGTACCGGGAGGACCGACGAGCAGC 18345 Query 16266 GCACCTCGTGGAAT 16279 | || || ||||| Sbjct 18346 ACGCCGCGCGGAAT 18359 >seq1043 Length=1979 Score = 107 bits (118), Expect = 2e-18 Identities = 206/302 (68%), Gaps = 9/302 (3%) Strand=Plus/Minus Query 102033 GAGACATACAGTAAACTCATAGACAAGTATATTAAGGATGGTGCTGAGAAGAAGCA---G 102089 ||||| |||||| ||||| |||| || || ||| | | ||||||||| | | Sbjct 514 GAGACCTACAGTCTTCTCATCGACACCTACATCAAGAACA---CCGAGAAGAAGAACATG 458 Query 102090 CTCTTTGAAGCCATCCAAACAGTTCCATGTATTCAAAAGAAAGCGGATTGGGCTATGAAG 102149 ||||| | |||||| | || | || || | |||||||| || ||||| || Sbjct 457 CTCTTCCACGCCATCGAGACTATCCCCGCCGTTAAGAAGAAAGCCGACTGGGCCTTGCGC 398 Query 102150 TGGTTTGATACAAAGTCGCGTTCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAG 102209 ||| | || || | || || || || ||||| | |||| ||||| ||| ||| Sbjct 397 TGGATC---ACCAACGCTCGCTCATTCGCCGAGCGTTTGGTCGCCTTTGCCGCTGTCGAG 341 Query 102210 GGTATCTTCTTCTCTGGTTCCTTCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATG 102269 ||||||||||| ||| |||||| | || | ||||||||||||||| ||| | ||| Sbjct 340 GGTATCTTCTTTAGTGGCAGTTTCTGCTCGATCTTTTGGCTCAAGAAGCGCGGTTTAATG 281 Query 102270 CCAGGTCTCTGCTTCTCCAACGAGCTTATCTCTCGTGACGAGGGACTCCACCAAGAGTTT 102329 | || | | ||||| |||||||| ||| |||||||||||| | ||| || ||| Sbjct 280 CACGGCTTGTCGTTCTCGAACGAGCTGATCAGTCGTGACGAGGGTTTGCACTGCGACTTT 221 Query 102330 GC 102331 || Sbjct 220 GC 219 >seq19281 Length=570 Score = 105 bits (116), Expect = 8e-18 Identities = 168/241 (70%), Gaps = 0/241 (0%) Strand=Plus/Minus Query 111619 ACATGTTCATGCGGGTCGCGATCGGTATCCATGGGGAAGATATTGATTCTGTTTTGGAGA 111678 ||||| | ||||| ||| |||| || ||||| || || |||||| | | | | | Sbjct 351 ACATGCTGATGCGTGTCTCGATTGGCATCCACGGCACCGACATTGATGCCGCCATCCACA 292 Query 111679 CATACGACAAGATGTCCCGTGGTATGTTCATCCACGCAACACCAACCCTCTTCAACGCTG 111738 | ||| || | | || | || |||||| ||||| || |||||||| |||||||||| Sbjct 291 CCTACAACCTGCTCTCGCAGCGTCTGTTCACTCACGCCACGCCAACCCTGTTCAACGCTG 232 Query 111739 GTACACCAAGACCCCAAATGTCCAGTTGTTTCCTTATTGCAAACAAGGAGGATTCAATCA 111798 | || || | || |||||||| || ||||| | | |||||||| || ||| Sbjct 231 GCACTCCCATCCCTCAAATGTCGTCGTGCTTCCTCGTCCAGATGAAGGAGGACTCGATCG 172 Query 111799 ATGGCATTTACGGCACTCTCACTGAATGTGCCCAAATCTCAAAGTGGGCTGGTGGTATCG 111858 | ||||| |||| |||||||| | || || | ||||| |||| |||||||| |||| Sbjct 171 AGGGCATCTACGACACTCTCAAGCAGTGCGCTCTCATCTCCAAGTCTGCTGGTGGCATCG 112 Query 111859 G 111859 | Sbjct 111 G 111 >seq3843 Length=4024 Score = 100 bits (110), Expect = 4e-16 Identities = 188/271 (69%), Gaps = 4/271 (1%) Strand=Plus/Plus Query 13722 AATTACCGCGAGTCTTACGGACTGTTTGCATGCTCCGGAATCCTCTTCAACCATGAATCA 13781 || || || ||| |||| || ||| || ||| || |||||||||||||| |||||| Sbjct 3376 AACTATCGTGAGGCTTATGGCATGTACGCTTGCAATGGTATCCTCTTCAACCACGAATCA 3435 Query 13782 CCGAGACGAGGTGCAGACTTTGTGACCATGAAGATTACCGAGGGTATCAAACAAATCATG 13841 ||| | |||| || ||||| |||| ||||| ||| || | | | || | Sbjct 3436 CCGCGCAGAGGAGCTACTTTTGTCACCAGAAAGATCACCAAGTTTGTTGCTGCCACCAAG 3495 Query 13842 AAGGGTGAAAAGGAGTTCATTGAAT-TGGGTAACATAAACGCGGAGAGAGATTGGGGTCA 13900 || | |||| | | || | | |||||| | || || || | ||||||||||| Sbjct 3496 CTCGGCAAGAAGG-GCACCCTGCTTCTCGGTAACTTGAATGCCAAGCGTGATTGGGGTCA 3554 Query 13901 CGCGAAGGACTATGTTGAAGCTATGTGGCTCATGCTTCAACAAGAGGAAGCC-GACGAAT 13959 ||| |||||||| || || || |||||| | ||||| || ||||| |||||| ||||| | Sbjct 3555 CGCCAAGGACTACGTCGAGGCAATGTGGTTGATGCTCCAGCAAGA-GAAGCCAGACGACT 3613 Query 13960 ATGTAGTAGCAACGGGTGAGACCCATTCAGT 13990 ||| | || || |||||||| || || || Sbjct 3614 TTGTCATTGCTACTGGTGAGACTCACTCGGT 3644 >seq4933 Length=3897 Score = 91.5 bits (100), Expect = 2e-13 Identities = 142/203 (70%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 16055 CTTTCCCACGGCATCAATCTCATCAATGAAGACGATGCATGGTTGATTTTCGCGAGCGAC 16114 |||||| || | ||||||||||| ||||| | ||||||||| | || | |||| Sbjct 423 CTTTCCTACCGAGTCAATCTCATCGATGAAAATGATGCATGGCTCCTTGGACCTGGCGAG 364 Query 16115 TTCAAAGAGATCCCGTACACGCTTGGCGCCCACACCAACAAACATCTCCACAAAGTTTGC 16174 ||||| | || || |||||||| || || |||||||| | |||| | ||| | | Sbjct 363 ATCAAACAACTCGCGCACACGCTTTGCACCGACACCAACGTATTTCTCGTCGAAGCTAGA 304 Query 16175 GGCGGAACATTGGATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAAGAGT 16234 | | | | || |||||| || | ||||| || ||||| || ||||| || || Sbjct 303 GCCAGTGGTGTAGAGGAAGGGAACGCCCGCCTCACCTGCGATGGCACGTGCGAGGAGGGT 244 Query 16235 CTTACCCGTACCTGGCTTACCCG 16257 ||||||||| ||||||| |||| Sbjct 243 CTTACCCGTTCCTGGCTCGCCCG 221 >seq3533 Length=1137 Score = 91.5 bits (100), Expect = 2e-13 Identities = 118/163 (72%), Gaps = 0/163 (0%) Strand=Plus/Plus Query 102169 GTTCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTT 102228 |||| || || || || | | |||||||| |||||||||||||||||| || Sbjct 789 GTTCATTCGCCGAACGTTTGGTGGCATTTGCTGCGGTTGAGGGTATCTTCTTCAGCGGCA 848 Query 102229 CCTTCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCA 102288 ||| || || || || ||| | ||||| | ||| | |||||||| || ||| |||| Sbjct 849 GCTTTTGTGCCATCTACTGGTTGAAGAAAAGGGGTTTAATGCCAGGCCTTACCTTTTCCA 908 Query 102289 ACGAGCTTATCTCTCGTGACGAGGGACTCCACCAAGAGTTTGC 102331 ||||||| ||| |||||||||||| || ||| || ||||| Sbjct 909 ACGAGCTGATCAGTCGTGACGAGGGTCTACACTGCGACTTTGC 951 >seq2691 Length=892 Score = 86.0 bits (94), Expect = 8e-12 Identities = 157/228 (69%), Gaps = 4/228 (2%) Strand=Plus/Minus Query 16064 GGCATCAATCTCATCAATGAAGACGATGCATGGTTGATTTTCGCGAGCGACTTCAAAGAG 16123 ||| || ||||| |||||||| || |||||||| | | | ||| || |||||||| Sbjct 407 GGCGTCGATCTCGTCAATGAACACAATGCATGGAGCACTCTTGCGTGCCTGCTCAAAGAG 348 Query 16124 ATCCCGTACACGCTTGGCG--CCCACACCAACAAACATCTCCACAAAGTTTGCGGCGGAA 16181 || || ||||| || || || ||||| ||||||||||| ||||||| | | || Sbjct 347 GTCGCGAACACG--TGCCGGTCCGACACCGACAAACATCTCGACAAAGTCCGAACCAGAG 290 Query 16182 CATTGGATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAAGAGTCTTACCC 16241 | ||| || || || | ||| || ||| | || |||||| | ||||| || Sbjct 289 GTCGAGTAGAATGGCACGTTGGCTTCGCCAGCAGTTGCCTTGGCGAGCAACGTCTTTCCG 230 Query 16242 GTACCTGGCTTACCCGCGAGGAGGGCACCTCGTGGAATCTTGGCGCCA 16289 || || || || |||| |||||| ||||| |||||||||||| Sbjct 229 GTTCCAGGTGGTCCGATCAGGATGGCACCGCGTGGGATCTTGGCGCCA 182 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620523378803440