Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acytostelium_20leptosomum_20[genbank_20GCA_5F900092245.1_202017-01- 02] 28,227 sequences; 57,256,845 total letters Query= NC_015273.1 Length=32317 Score E Sequences producing significant alignments: (Bits) Value seq7329 194 3e-45 seq19415 143 5e-30 >seq7329 Length=1002 Score = 194 bits (214), Expect = 3e-45 Identities = 286/398 (72%), Gaps = 8/398 (2%) Strand=Plus/Plus Query 27128 CACGCCGGTTTCATCCTGTACATGACCGATGCGGCGCA-AAGTCAAAGCGATGTCGACAA 27186 || ||||||||||| |||||||||||||| |||||||| ||| | || || ||||| Sbjct 6 CATGCCGGTTTCATTCTGTACATGACCGACGCGGCGCAGAAGGAAGAG-GACATCGACTC 64 Query 27187 GATGCGCGAGGCGTTGAAGAACAGCAAGGGGCCGGGGAATTTCCGAAACCTTTTCATGTA 27246 ||||| || |||||||| || ||||| || || || || ||||| || |||| Sbjct 65 ACTGCGCACCGCACTGAAGAACTCGAAAGGGCCAGGCAACTTTCGCAACCTGTTTGTGTA 124 Query 27247 CGCGCCGAACGGCAAGAAAGACGGCATCCAGCTCATTCCGGTTTCCGAGGTCACGGCGAA 27306 ||||||| ||||||||||||||||| |||||||| ||||| |||||| |||| || Sbjct 125 CGCGCCGGCAGGCAAGAAAGACGGCATTCAGCTCATCCCGGTGAGCGAGGTTGCGGCCAA 184 Query 27307 AGACGAGTTCTTCAACATCAAGAATGTCACGCGCGACGACTTGCTCGCGGCGCATCGCAT 27366 ||||| ||| | ||||| || ||| || ||||| ||||||||||| ||||| Sbjct 185 GGACGAATTCAGCTCGATCAAAAACATCAGCCGTGACGATCTGCTCGCGGCGTTGCGCAT 244 Query 27367 CCCGCCTCAGCTCATGGGGATCGTGCCGAGCAATACCGGCGGATTCGG--CGCAACGGAC 27424 || || ||| | ||||| ||||||||| || | ||||| || || || ||| Sbjct 245 TCCACCGCAGTTGATGGGCATCGTGCCGCAGAACGCGGGCGGTTTTGGGTCGTTGCGG-- 302 Query 27425 AAGGCCGCCGAGGTGTTCGGC-GTGAATGAAATCGCGCCCCTGCAACGGCGCTTTGAACA 27483 |||| || ||||| || ||| || || || | | ||| |||| | | | | || Sbjct 303 GAGGCTGCTGAGGT-TTGGGCGGTCAACGAGCTGGAGCCGTTGCAGGCGAGGCTGGCCCA 361 Query 27484 GCTCAACGAGTGGATCGGCGACGAGGTTGTGCGCTTCA 27521 | ||||||||||| | || || |||||||| | |||| Sbjct 362 GGTCAACGAGTGGCTGGGTGAAGAGGTTGTCAGGTTCA 399 >seq19415 Length=1017 Score = 143 bits (158), Expect = 5e-30 Identities = 237/336 (71%), Gaps = 6/336 (2%) Strand=Plus/Minus Query 26190 CAGCTCGTCAAACAGTTCTATCCGAGCGCGGTCGCGCTCAACTATTCGCCCGAAATCAAG 26249 ||||| || || ||||||| |||| | | || ||| ||| || |||||| |||| Sbjct 929 CAGCTGGTGAAGCAGTTCTTCCCGAACATCACCACGTTCAGCTACTCACCCGAAGTCAAA 870 Query 26250 GGGCGTCTCGTGCTTAAGGGCTTGTCG--GTGATCGGCAAGGGCCGGCTCGAATTCGATG 26307 || || ||||| |||| ||| || || ||| || ||| |||| || ||||||| Sbjct 869 ACCCGCCTGGTGCTGAAGG-CTTA-CGACGTCATCAAAAACGGCAGGCTGGAGTTCGATG 812 Query 26308 CCGGTTGGACAGACCTAGCGCAATCCTTCATGGCCATTCGGAAAACCATGACGGCGAGCG 26367 | || ||||| || | ||||| || || ||||| || || ||||| || || || || Sbjct 811 CGGGCTGGACGGATATGGCGCAGTCATTGATGGCTATCCGCAAAACAATCACCGCCTCCG 752 Query 26368 GCCGAAAGGTGACATACGAGGCGAGCCGCAGCGAGGAAACCGGCCACGCCGATCTAGCGT 26427 | || | | | || ||| ||| | |||| || || || ||||| ||||| ||||||| Sbjct 751 GGCGCATGTTCACTTACACGGCCGGTCGCACAGACGAGACGGGCCATGCCGACCTAGCGT 692 Query 26428 GGGCGTGCCTGCACGCGCTCGATAACGAGCCGCTAG-AGGGCACGACCGCAAACAATACC 26486 ||||| | |||||||| | ||||| || || | |||||| |||| | || ||| Sbjct 691 GGGCGCTGTTCCACGCGCTGCACAACGAACCCCTTGAAGGGCA-GACCACGGCGAACACC 633 Query 26487 GGCTTTATGGAGTTCTCTTAATGAGCAAGCGTAAGC 26522 || |||||||||| || | ||||||| ||||||| Sbjct 632 GGATTTATGGAGTCCTACTGATGAGCAGACGTAAGC 597 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 103258176705346