Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acytostelium_20leptosomum_20[genbank_20GCA_5F900092245.1_202017-01- 02] 28,227 sequences; 57,256,845 total letters Query= NC_015284.1 Length=183806 Score E Sequences producing significant alignments: (Bits) Value seq48 170 2e-37 >seq48 Length=607718 Score = 170 bits (188), Expect = 2e-37 Identities = 272/386 (70%), Gaps = 6/386 (2%) Strand=Plus/Minus Query 159409 TCAGCACATGGAACTAATCCTGCATCAGCAGTGATGGCAGGGATGAAAGTTGTAGGTGTC 159468 || || |||||||| ||||| || || |||| ||||| || |||||| |||| || Sbjct 511821 TCTGCTCATGGAACCAATCCGGCTTCTGCAGCAATGGCCGGAATGAAAATTGTGATCGTT 511762 Query 159469 AAGTGTGATGATGATGGCAACATAGACATCAAAGATCTAGAGAAGAAAGCAATCATGA-- 159526 || | | ||| | || || ||||| | | || || | ||||| || || Sbjct 511761 AAATCTCTTGAAAACGGAAATATAGATGTAGAGGACCTTAAAGCTAAAGCC--CAGGAGC 511704 Query 159527 ATACATTTGAACTGTCATGTATTATGATTACATATCCATCTACACATGGTGTATTTGAAA 159586 ||| | ||| || || ||| | ||| | || || || ||||| |||||||| || ||| Sbjct 511703 ATAAAAATGAGCTTTCCTGTTTAATGGTCACTTACCCTTCTACCCATGGTGTGTTCGAAG 511644 Query 159587 CAAACATCAGACAGATATGTAAGATTGTTCATGAGAATGGTGGTCAGGTATATCTTGATG 159646 || ||| | | || || || || | ||||| || || || ||||| ||| | |||| Sbjct 511643 AAAGCATTATTGACATCTGCAACATCATCCATGAAAACGGAGGACAGGTTTATATGGATG 511584 Query 159647 GTGCAAATCTAAATGCACAGGTAGGTCTAGCAAAACCATGTGACTAT-GGTGCAGATGTA 159705 |||||||| | |||||||| |||||| || | | || | | ||| ||||| || || Sbjct 511583 GTGCAAATATGAATGCACAAGTAGGTTTAACCAGTCCCGGACA-TATCGGTGCTGACGTC 511525 Query 159706 TGTCATCTAAACTTACATAAGACATTCTGTATTCCACATGGAGGTGGAGGTCCTGGCGTA 159765 ||||| || ||| | || || || || || |||||||| || ||||| ||||||||| | Sbjct 511524 TGTCACCTGAACCTGCACAAAACTTTTTGCATTCCACACGGTGGTGGTGGTCCTGGCATG 511465 Query 159766 GGTCCTATTGGTGTAGCAAAACATCT 159791 |||||||| ||||| |||||||| || Sbjct 511464 GGTCCTATCGGTGTTGCAAAACACCT 511439 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 587843713484720