Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acytostelium_20leptosomum_20[genbank_20GCA_5F900092245.1_202017-01- 02] 28,227 sequences; 57,256,845 total letters Query= NC_015286.1 Length=175230 Score E Sequences producing significant alignments: (Bits) Value seq19411 111 2e-19 seq7351 82.4 9e-11 >seq19411 Length=388 Score = 111 bits (122), Expect = 2e-19 Identities = 69/74 (93%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 22476 GGGGAATTAGCTCAGTTGGTAGAGCGCCTGCTTTGCAAGCAGGATGTCAGGAGTTCGAGT 22535 |||| |||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct 40 GGGGCCTTAGCTCAGTTGGTAGAGCGCCTGCTTTGCAAGCAGGATGTCAGGAGTTCGAAT 99 Query 22536 CTCCTATTCTCCAC 22549 |||||| |||||| Sbjct 100 CTCCTAGGCTCCAC 113 >seq7351 Length=226 Score = 82.4 bits (90), Expect = 9e-11 Identities = 101/133 (76%), Gaps = 5/133 (4%) Strand=Plus/Minus Query 22481 ATTAGCTCAGTTGGTAGAGCGCCTGCTTTGCAAGCAGGATGTCAGGAGTTCGAGTCTCCT 22540 |||||||||| ||| ||||| ||| | || |||| ||| ||| | |||||| || | | Sbjct 215 ATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCGGCGGTTCGA-TCCCGT 157 Query 22541 ATTCTCCACTCAATCC--TCTTTAGCTCAGC-GGTAGAGCGGTTGACTGTTAATCAATTG 22597 || || | | | | || ||||||||| |||||||| ||||||| ||||||||||| Sbjct 156 CATCACC-CACCACCGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTG 98 Query 22598 GTCCCTGGTTCGA 22610 ||| | ||||||| Sbjct 97 GTCGCAGGTTCGA 85 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 560410196474800