Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acytostelium_20leptosomum_20[genbank_20GCA_5F900092245.1_202017-01- 02] 28,227 sequences; 57,256,845 total letters Query= NC_015293.1 Length=30651 Score E Sequences producing significant alignments: (Bits) Value seq4750 89.7 1e-13 seq360 82.4 1e-11 >seq4750 Length=4641 Score = 89.7 bits (98), Expect = 1e-13 Identities = 182/270 (67%), Gaps = 3/270 (1%) Strand=Plus/Minus Query 1998 TCAACAACAATTTCAGTGGTGTACTTTTCTTGACCTTGTTGGTCAGTCCATTTGCGGGTT 2057 || || | |||||| ||||||||| || ||| | || || ||| | || ||| Sbjct 4284 TCGACGATAATTTCGGTGGTGTACCGTTTGATACCGTCTTTTTC---CCACTCTCGTGTT 4228 Query 2058 TTTAACTTGCCTTCAATGTATAGCTTACTACCCTTACGTACATACTCGCCGATTATTTCA 2117 | | ||| ||||| ||||||| || || || || | |||||| || |||||| Sbjct 4227 TGAAGCTTACCTTCGATGTATACCTGCGATCCTTTCCGCAGATACTCACCAGCGATTTCA 4168 Query 2118 GCTAACTTTCCAAAAACAACAATTCTGTGCCACTCGGTTTCTTCTTTTGGCTCGCCAGTG 2177 || | || ||||| | | || | |||||| ||||| | ||| | || || || Sbjct 4167 GCGACTTTCCCAAACAAAGAAACACGGTGCCATTCGGTCTTTTCGACTTTCTGTCCCGTT 4108 Query 2178 CTTTTATCCTTCCATTTTTCGCTAGTTGCTAGAGTTAGGTTTGCCACTGCATTTCCGTTA 2237 || || |||| | || || ||||| || | || || | |||||||| ||||| Sbjct 4107 TGCTTGTCAGTCCACTGCTCACTTGTTGCAAGGCTGAGATTGGTTACTGCATTACCGTTC 4048 Query 2238 GGTATGTAACGAATTTCTGGATCTTGACCA 2267 |||| ||| ||| ||||||||||||||||| Sbjct 4047 GGTAAGTAGCGAGTTTCTGGATCTTGACCA 4018 >seq360 Length=29890 Score = 82.4 bits (90), Expect = 1e-11 Identities = 183/275 (67%), Gaps = 0/275 (0%) Strand=Plus/Plus Query 2001 ACAACAATTTCAGTGGTGTACTTTTCTTGACCTTGTTGGTCAGTCCATTTGCGGGTTTTT 2060 || || | ||| |||||||| || || ||||| ||| || ||||| |||||||| Sbjct 27273 ACCACCACTTCGGTGGTGTATTTGTCCTGACCGGATTGATCGGTCCACTTGCGGGTACGC 27332 Query 2061 AACTTGCCTTCAATGTATAGCTTACTACCCTTACGTACATACTCGCCGATTATTTCAGCT 2120 | || |||||||||||| | || | || ||||| | |||||| || | ||| || Sbjct 27333 AGCTGGCCTTCAATGTACACCTGAGAGCCTTTACGCAGATACTCACCAGCGACTTCCGCC 27392 Query 2121 AACTTTCCAAAAACAACAATTCTGTGCCACTCGGTTTCTTCTTTTGGCTCGCCAGTGCTT 2180 | || || || | |||| | |||||||||||| | ||||| ||||| || Sbjct 27393 AGTTTGCCGAACAGCACAACGCGGTGCCACTCGGTCTGCTCTTTCATTTCGCCGGTCTGC 27452 Query 2181 TTATCCTTCCATTTTTCGCTAGTTGCTAGAGTTAGGTTTGCCACTGCATTTCCGTTAGGT 2240 || || ||| |||| |||||| || || | ||| || || || || | || Sbjct 27453 TTGTCACGCCAGGATTCGGAAGTTGCCAGCGTGAAGTTGGCGACAGCGCCGCCACTTGGC 27512 Query 2241 ATGTAACGAATTTCTGGATCTTGACCAGCATTACC 2275 ||||| || | ||| || || || || |||||| Sbjct 27513 ATGTAGCGTACTTCCGGGTCCTGCCCCAGATTACC 27547 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 97928763700262