Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acytostelium_20leptosomum_20[genbank_20GCA_5F900092245.1_202017-01- 02] 28,227 sequences; 57,256,845 total letters Query= NC_015326.1 Length=346754 Score E Sequences producing significant alignments: (Bits) Value seq4240 161 2e-34 seq3381 161 2e-34 seq1351 159 8e-34 seq8653 154 3e-32 seq3382 143 6e-29 seq13839 105 1e-17 >seq4240 Length=2116 Score = 161 bits (178), Expect = 2e-34 Identities = 158/204 (77%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 194937 GTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTG 194996 |||||| |||||||| || ||||||||||| || | ||||| | || || |||||||| Sbjct 1646 GTGAAGGGTGGACTCCTTCTGAATATTGTAGTCAGAGAGAGTGCGACCGTCCTCGAGCTG 1587 Query 194997 CTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTT 195056 ||| || || ||||| || || || ||||| || || || || || ||||| || || || Sbjct 1586 CTTTCCGGCAAAGATGAGACGCTGCTGGTCGGGTGGGATTCCCTCCTTGTCCTGGATCTT 1527 Query 195057 TTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGT 195116 |||||||||||| |||||||| || | ||| || |||||||| | |||||||| || Sbjct 1526 GGCCTTGACGTTCTCGATGGTGTCAGAGCCTTCGACCTCAAGGGTGATGGTCTTTCCAGT 1467 Query 195117 CAAAGTTTTTACGAACACTTGCAT 195140 |||||| || ||||| | ||||| Sbjct 1466 CAAAGTCTTGACGAAGATCTGCAT 1443 Score = 147 bits (162), Expect = 5e-30 Identities = 155/204 (76%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 194938 TGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGC 194997 || ||||| ||||| || || |||||||| || | || || | ||||| || | |||| Sbjct 1417 TGGAGAGTTGACTCCTTCTGGATATTGTAGTCAGAGAGGGTACGACCATCCTCCAACTGC 1358 Query 194998 TTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTT 195057 || || || ||||| || ||||| ||||| || ||||| || || ||||| || || || Sbjct 1357 TTTCCGGCAAAGATGAGACGTTGCTGGTCGGGTGGAATTCCCTCCTTGTCCTGGATCTTG 1298 Query 195058 TGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTC 195117 |||||||||||| ||||||||||| | || || |||||||||| ||||| || || Sbjct 1297 GCCTTGACGTTCTCGATGGTGTCCGAGCCCTCGACCTCAAGGGTAATAGTCTTACCAGTG 1238 Query 195118 AAAGTTTTTACGAACACTTGCATT 195141 | ||||||||||| | |||||| Sbjct 1237 AGTGTTTTTACGAAAATCTGCATT 1214 >seq3381 Length=12314 Score = 161 bits (178), Expect = 2e-34 Identities = 167/219 (76%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 194922 GAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCT 194981 |||||| | ||| | ||| ||||| || || |||||||| ||||| ||| ||||||| | Sbjct 1405 GAGTCTGAGAACCAAGTGGAGAGTAGATTCCTTTTGAATGTTGTAGTCGCCAAGAGTACG 1346 Query 194982 CCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTC 195041 ||||| ||||| ||||| || || ||||| || ||||| || || || || || || || Sbjct 1345 ACCATCCTCGAGTTGCTTGCCGGCAAAGATGAGACGTTGCTGATCGGGTGGGATACCCTC 1286 Query 195042 TTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGT 195101 || ||||| || || |||||||||||| || || ||||||| || || || ||||| Sbjct 1285 CTTATCTTGGATCTTGGCCTTGACGTTCTCGATAGTATCCGAACCCTCAACCTCGAGGGT 1226 Query 195102 AACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 | |||||||| |||||||| || || || | |||||| Sbjct 1225 GATAGTCTTTCCGGTCAAAGTCTTCACAAAGATTTGCAT 1187 Score = 147 bits (162), Expect = 5e-30 Identities = 164/219 (75%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 194922 GAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCT 194981 |||||| | || | |||||| ||||||||||| || || ||||| || | || || | Sbjct 1177 GAGTCTAAGGACCAAGTGAAGGGTGGACTCTTTCTGGATGTTGTAGTCACCGAGGGTACG 1118 Query 194982 CCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTC 195041 |||||||| | ||||| || || || || || || || ||||| || ||||| ||||| Sbjct 1117 ACCATCTTCCAATTGCTTTCCAGCAAAAATGAGACGCTGCTGGTCGGGTGGAATACCTTC 1058 Query 195042 TTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGT 195101 ||||||||||| || |||||| ||||||||||||||||| | || || ||||| || Sbjct 1057 CTTGTCTTGAATCTTAGCCTTGACATTCTCAATGGTGTCCGAGCCCTCAACCTCAAGAGT 998 Query 195102 AACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 | |||||| || || | ||| || || || | ||||| Sbjct 997 GATCGTCTTGCCAGTGAGAGTCTTGACAAAGATCTGCAT 959 Score = 143 bits (158), Expect = 6e-29 Identities = 163/219 (74%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 194922 GAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCT 194981 |||||| | ||| | ||| ||||| || || ||||| || ||||| ||| ||||||| | Sbjct 1633 GAGTCTGAGAACCAAGTGGAGAGTAGATTCCTTTTGGATGTTGTAGTCGCCAAGAGTGCG 1574 Query 194982 CCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTC 195041 ||||| ||||||||||| || || ||||| | || || ||||| || || || || || Sbjct 1573 GCCATCCTCGAGCTGCTTGCCAGCAAAGATCAAACGCTGCTGGTCGGGTGGGATACCCTC 1514 Query 195042 TTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGT 195101 || ||||| || ||| ||| |||||||||||||| || || | ||| || || || || Sbjct 1513 CTTATCTTGGATCTTTGCCTTTACGTTCTCAATGGTATCAGAGCCTTCAACCTCGAGAGT 1454 Query 195102 AACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 | ||||| || || | ||| || ||||| | ||||| Sbjct 1453 GATAGTCTTACCAGTAAGAGTCTTGACGAAGATCTGCAT 1415 Score = 127 bits (140), Expect = 5e-24 Identities = 159/218 (73%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 194923 AGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTC 194982 ||||| | || || ||||||||||||||||| || || ||||| || | || || | Sbjct 948 AGTCTGAGGACGAGATGAAGAGTGGACTCTTTCTGGATGTTGTAGTCACCGAGGGTGCGA 889 Query 194983 CCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCT 195042 ||||| ||||||||||| || || ||||| || || || || || || || || || || Sbjct 888 CCATCCTCGAGCTGCTTGCCAGCAAAGATGAGACGCTGCTGATCGGGTGGGATACCCTCC 829 Query 195043 TTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTA 195102 || ||||| || || ||| || || ||||| ||||| || | || || || || || Sbjct 828 TTATCTTGGATCTTAGCCTTAACATTTTCAATAGTGTCGGAGCCCTCAACCTCCAGTGTG 769 Query 195103 ACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 | ||||| || |||||||| || || || | |||||| Sbjct 768 ATGGTCTTGCCAGTCAAAGTCTTAACAAAGATTTGCAT 731 >seq1351 Length=12664 Score = 159 bits (176), Expect = 8e-34 Identities = 166/218 (76%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 194923 AGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTC 194982 |||||||| || | |||||| |||||||| |||||||| || || ||| ||||||| | Sbjct 5149 AGTCTCAATACCAAGTGAAGGGTGGACTCCTTTTGAATGTTATAGTCGCCAAGAGTGCGA 5090 Query 194983 CCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCT 195042 ||||| || |||||||| || || ||||| || || || ||||| || || || || || Sbjct 5089 CCATCCTCAAGCTGCTTGCCGGCAAAGATGAGACGCTGCTGGTCGGGTGGGATTCCCTCC 5030 Query 195043 TTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTA 195102 ||||||||||| || |||||||||||| |||||||| || | || || ||||| || Sbjct 5029 TTGTCTTGAATCTTGGCCTTGACGTTCTCGATGGTGTCAGAGCCCTCAACCTCAAGTGTG 4970 Query 195103 ACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 | ||||| || || | || || ||||| | ||||| Sbjct 4969 ATGGTCTTGCCAGTGAGGGTCTTGACGAAGATCTGCAT 4932 Score = 143 bits (158), Expect = 6e-29 Identities = 154/204 (75%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 194937 GTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTG 194996 |||||| |||||||| |||||||| ||||| || | || || | ||||| || ||||| Sbjct 4907 GTGAAGGGTGGACTCCTTTTGAATGTTGTAGTCACCGAGGGTGCGTCCATCCTCAAGCTG 4848 Query 194997 CTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTT 195056 ||| || || ||||| || || || ||||| || ||||| || || |||||||| || || Sbjct 4847 CTTGCCGGCAAAGATGAGACGCTGCTGGTCGGGTGGAATACCCTCCTTGTCTTGGATCTT 4788 Query 195057 TTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGT 195116 |||||||||||| |||||||| || | || || || || || | |||||||| || Sbjct 4787 GGCCTTGACGTTCTCGATGGTGTCGGATCCCTCGACCTCCAGAGTGATGGTCTTTCCAGT 4728 Query 195117 CAAAGTTTTTACGAACACTTGCAT 195140 | ||| || || || | |||||| Sbjct 4727 TAGAGTCTTCACAAAGATTTGCAT 4704 Score = 129 bits (142), Expect = 1e-24 Identities = 154/210 (73%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 194931 AACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTC 194990 ||| | |||||| |||||||| |||||||| ||||| || | || || | ||||| || Sbjct 4685 AACCAAGTGAAGGGTGGACTCCTTTTGAATGTTGTAGTCACCGAGGGTGCGTCCATCCTC 4626 Query 194991 GAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTG 195050 || ||||| || || ||||| | ||||| ||||| || || || || || ||||| || Sbjct 4625 AAGTTGCTTGCCGGCAAAGATCAAACGTTGCTGGTCGGGTGGGATACCCTCCTTGTCCTG 4566 Query 195051 AATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTT 195110 || || |||||||||||| |||||||| || | || || || ||||| | ||||| Sbjct 4565 GATCTTGNNCTTGACGTTCTCGATGGTGTCGGATCCCTCGACCTCGAGGGTGATGGTCTT 4506 Query 195111 TCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || || | || || ||||| | ||||| Sbjct 4505 GCCAGTGAGGGTCTTGACGAAGATCTGCAT 4476 >seq8653 Length=1535 Score = 154 bits (170), Expect = 3e-32 Identities = 157/205 (77%), Gaps = 0/205 (0%) Strand=Plus/Plus Query 194937 GTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTG 194996 ||| || || ||||| || ||||| ||||| ||| | ||||| | || ||||| || || Sbjct 217 GTGGAGGGTAGACTCCTTCTGAATGTTGTAGTCGCCGAGAGTGCGACCGTCTTCAAGTTG 276 Query 194997 CTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTT 195056 ||| || || ||||| | |||||||| || || || || ||||||||||||||||| || Sbjct 277 CTTGCCGGCAAAGATCAAACGTTGTTGATCGGGTGGGATACCTTCTTTGTCTTGAATCTT 336 Query 195057 TTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGT 195116 | |||||||||||| || ||||| || | || || || || || | |||||||| || Sbjct 337 TGCCTTGACGTTCTCGATAGTGTCAGAGCCCTCGACCTCTAGTGTGATGGTCTTTCCAGT 396 Query 195117 CAAAGTTTTTACGAACACTTGCATT 195141 ||| || ||||| || | ||||||| Sbjct 397 CAATGTCTTTACAAAGATTTGCATT 421 Score = 105 bits (116), Expect = 1e-17 Identities = 139/193 (72%), Gaps = 0/193 (0%) Strand=Plus/Plus Query 194949 CTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGCTTACCTGCGAA 195008 ||| || ||||| ||||| || | || || | ||||| ||||||||||| || || || Sbjct 1 CTCCTTCTGAATGTTGTAGTCACCGAGGGTACGACCATCCTCGAGCTGCTTGCCGGCAAA 60 Query 195009 GATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTGCTTGACGTT 195068 ||| || || || || || || || || || || || ||||| || || ||||||||| Sbjct 61 GATGAGACGCTGCTGATCGGGTGGGATTCCCTCCTTATCTTGGATCTTGGCCTTGACGTT 120 Query 195069 CTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTCAAAGTTTTTAC 195128 ||| || ||||| || | || || || ||||| | ||||| || || | ||| || || Sbjct 121 CTCGATAGTGTCAGAGCCCTCAACCTCGAGGGTGATAGTCTTGCCAGTGAGAGTCTTCAC 180 Query 195129 GAACACTTGCATT 195141 || | |||||| Sbjct 181 AAAGATCTGCATT 193 >seq3382 Length=4522 Score = 143 bits (158), Expect = 6e-29 Identities = 154/204 (75%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 194937 GTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTG 194996 |||||| |||||||| ||||| || ||||| || | || || | || || || | ||| Sbjct 4156 GTGAAGGGTGGACTCCTTTTGGATGTTGTAGTCAGAGAGGGTACGACCGTCCTCCAACTG 4097 Query 194997 CTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTT 195056 ||| || || ||||| || || || ||||| || || || || || |||||||| || || Sbjct 4096 CTTTCCGGCAAAGATGAGACGCTGCTGGTCGGGTGGGATTCCCTCCTTGTCTTGGATCTT 4037 Query 195057 TTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGT 195116 |||||||||||| ||||| || |||| || || |||||||| | |||||||| || Sbjct 4036 GGCCTTGACGTTCTCGATGGTATCGGAACCCTCAACCTCAAGGGTGATGGTCTTTCCGGT 3977 Query 195117 CAAAGTTTTTACGAACACTTGCAT 195140 || ||| || ||||| | |||||| Sbjct 3976 CAGAGTCTTGACGAAAATTTGCAT 3953 Score = 123 bits (136), Expect = 6e-23 Identities = 149/203 (73%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 194938 TGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGC 194997 || ||||| ||||| || || |||||||| || | || || | ||||| || | |||| Sbjct 4383 TGGAGAGTTGACTCCTTCTGGATATTGTAGTCAGAGAGGGTACGACCATCCTCCAACTGC 4324 Query 194998 TTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTT 195057 || || || ||||| || ||||| ||||| || ||||| || || ||||| || || || Sbjct 4323 TTTCCGGCAAAGATGAGACGTTGCTGGTCGGGTGGAATTCCCTCCTTGTCCTGGATCTTG 4264 Query 195058 TGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTC 195117 ||||||||| ||||||||||| || | || || || ||||| | ||||| || || Sbjct 4263 GCCTTGACGTTTTCAATGGTGTCGGATCCCTCGACCTCGAGGGTGATGGTCTTGCCAGTG 4204 Query 195118 AAAGTTTTTACGAACACTTGCAT 195140 | || || ||||| | ||||| Sbjct 4203 AGGGTCTTGACGAAGATCTGCAT 4181 Score = 87.8 bits (96), Expect = 4e-12 Identities = 87/113 (77%), Gaps = 0/113 (0%) Strand=Plus/Minus Query 195028 GGAGGAATGCCTTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTT 195087 || || || || || |||||||| || || |||||||||||| |||||||| || | Sbjct 4521 GGTGGGATACCCTCCTTGTCTTGGATCTTGGCCTTGACGTTCTCGATGGTGTCAGAGCCC 4462 Query 195088 TCCACTTCAAGGGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || || |||||||| | |||||||| |||||||| || ||||| | ||||| Sbjct 4461 TCAACCTCAAGGGTGATGGTCTTTCCAGTCAAAGTCTTGACGAAGATCTGCAT 4409 >seq13839 Length=228 Score = 105 bits (116), Expect = 1e-17 Identities = 103/133 (77%), Gaps = 0/133 (0%) Strand=Plus/Minus Query 194937 GTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTG 194996 |||||| |||||||| |||||||| ||||| || | || || | ||||| || ||||| Sbjct 133 GTGAAGGGTGGACTCCTTTTGAATGTTGTAGTCACCGAGGGTGCGTCCATCCTCAAGCTG 74 Query 194997 CTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTT 195056 ||| || || ||||| || || || ||||| || || || || || ||||||||||| || Sbjct 73 CTTGCCGGCAAAGATGAGACGCTGCTGGTCGGGTGGGATTCCCTCCTTGTCTTGAATCTT 14 Query 195057 TTGCTTGACGTTC 195069 |||||||||| Sbjct 13 GGCCTTGACGTTC 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1109080346618109