Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acytostelium_20leptosomum_20[genbank_20GCA_5F900092245.1_202017-01- 02] 28,227 sequences; 57,256,845 total letters Query= NC_016924.1 Length=185139 Score E Sequences producing significant alignments: (Bits) Value seq19 181 1e-40 seq3533 93.3 5e-14 >seq19 Length=770976 Score = 181 bits (200), Expect = 1e-40 Identities = 538/825 (65%), Gaps = 16/825 (2%) Strand=Plus/Minus Query 36883 TTTTTTGATATTCTCCAACTCGTCTTTCGAAAAAATTTGTCTTTCCTTCTAGTGATATAT 36942 |||||||||| || || || ||| | || || ||||| || || |||| || || || Sbjct 360853 TTTTTTGATAATCACCCACACGTTTCTCAAAGAAATTGGTTTTGCCTTGCAGGGAGATCA 360794 Query 36943 TTTCCATAAAATCAAATGGATTAGATGTATTATATATAGTACTACATGATAATTCCTTCA 37002 | |||||||||||||| ||||| | | || |||||| | || | | ||||| || Sbjct 360793 TCTCCATAAAATCAAACGGATTGGTGGCATGATATATTTTGGTATAACCCAGTTCCTGCA 360734 Query 37003 GAAGCCTATCCGCAACAAATTCTATGTATTTACACATTAGTTCATAGTTTATACCAATTA 37062 | || || |||||||| || || || | |||| |||| || || || || | Sbjct 360733 GCCATCTGTCTGCAACAAACTCAATATACTGTGACATCAGTTTTGCATTCATCCCGATCA 360674 Query 37063 GTTTTACTGGAATTGCATCTTGAAGAAATAGTTTTTCTATTATTACAGCATCTT---TAA 37119 | || || | |||||| || |||| ||||| ||| ||| || || ||| Sbjct 360673 GGGCAACCGGCAAGGCATCTGTAATAAATTCCTTTTCGATTTCTACCGCGTCGCGGATAA 360614 Query 37120 CTATATTAACAA-TAACTTCTTCAGTTGGGGGATATTTTAAATATTTAAACAATAAACAT 37178 | || ||| | | || |||||| || ||| | |||| | | | || Sbjct 360613 TTCCATGAACGACTTCCTGGCTCAGTTT----ATTTTTGAGCATTTTATAAAGCAGGCAG 360558 Query 37179 GCAAAATCACAATGTAAACCTTCATCTCTACTTATCAATTCATTAGAAAAGGTTAATCCT 37238 ||||| |||||||| | || |||||||| ||||| |||||| |||||||| ||| Sbjct 360557 GCAAATTCACAATGCATCCCCTCATCTCTGGAAATCAACTCATTACTAAAGGTTAGCCCT 360498 Query 37239 GGCATTAAACCTCtttttttAATCCAAAATATTGCTGCAAAAGATCCAGAA-AAGAAAAT 37297 ||||| | ||||||||||| | ||| || || | || ||| ||| | |||||||| Sbjct 360497 GGCATCAGGCCTCTTTTTTTCAACCAGAAGATCGAA-CAGAAGCTCCCGCTGAAGAAAAT 360439 Query 37298 ACCTTCAACTGCTGCAAATGCTACAAGACGTGTACCGAAAGTTGAACTATAATCAGAAAT 37357 ||||| ||||| || || || || | |||| | ||| || | | | || Sbjct 360438 GCCTTCCACTGCGGCGAAAGCCACCAAACGTTCGGCAAAATTTCCGCCCTCA------AT 360385 Query 37358 CCAtttttttGTCCAATCTGCCTTTAATTTAACACATTCAATTGTTTCAATTGCTTTTAA 37417 ||| || ||| ||||| ||| || ||||| || || || | || | || Sbjct 360384 CCAGCGCAATGCCCATTCTGCTTTTTTCTTTACACAAGGAACCGTCTCTACGGCATGGAA 360325 Query 37418 GAGAAAGtttttttCTTCACTATCTGTTATATAAGTATCAATTAGTAAACTATACATTTC 37477 || || |||||||||| |||| | ||||| ||||| || || | ||| |||| Sbjct 360324 CAGCCTGTCTTTTTCTTCAGGATCTTTAATATAGGTATCGATCAGCAGCGCATAGGTTTC 360265 Query 37478 AGAGTGAATATTTTCAATAGCTATCTGAAAACCATAAAAACACCTAGCTTCAGATAATTG 37537 |||||| || ||||| || ||||| || ||||||||||| | ||||| | | || Sbjct 360264 AGAGTGGATGTTTTCCATCATGATCTGGAAGCCATAAAAACAACGGGCTTCGGGAAGCTG 360205 Query 37538 AACATCGTTAAAAAACCTCTTAGCTAAGTTTTCATTAACTATCCCATCACTAGCTGCAAA 37597 || ||| | | || || || | ||||||||| || || || ||||| || ||||| Sbjct 360204 TACTTCGCTCATGAAGTTCACTGCAAGGTTTTCATTTACAATGCCGTCACTTGCAGCAAA 360145 Query 37598 GAAAGCAAGAACATATTTTATAAAATGTCTTTCATCATTTGATAATTTTTTCCAATCATT 37657 |||||||| | || || ||||| | || | | ||| || | ||| | || Sbjct 360144 AAAAGCAAGTATATGAGAAATGAAATGACGCTCGCCTGTATTTAAGTTGTCCCAGTGCTT 360085 Query 37658 AATATCTTTTGATAAATCAACTTCATCAACGGTCCAAAAACTTGC 37702 || | || | |||| ||| ||| ||||||| |||||||| Sbjct 360084 CTGGTCATCAGAAAGGTCAATTTCTTCAGCGGTCCAGAAACTTGC 360040 >seq3533 Length=1137 Score = 93.3 bits (102), Expect = 5e-14 Identities = 304/469 (65%), Gaps = 5/469 (1%) Strand=Plus/Minus Query 37163 TTTAAACAATAAACATGCAAAATCACAATGTAAACCTTCATCTCTACTTATCAATTCATT 37222 |||| ||| | || ||||| || || |||| ||| || || | ||| |||| || || Sbjct 967 TTTATACAGCATGCAAGCAAAGTCGCAGTGTAGACCCTCGTCACGACTGATCAGCTCGTT 908 Query 37223 AGAAAAGGTTAATCCTGGCATTAAACCTCtttttttAATCCAAAATATTGCTGCAAAAGA 37282 |||||||| | |||||||||||||| ||||| || | ||| | || || |||||| Sbjct 907 GGAAAAGGTAAGGCCTGGCATTAAACCCCTTTTCTTCAACCAGTAGATGGC-ACAAAAGC 849 Query 37283 T-CCAGAAAAGAAAATACCTTCAACTGCTGCAAATGCTACAAGACGTGTACCGAAAGTTG 37341 | || ||||| ||||| ||||| || |||||||| || | |||| |||| || Sbjct 848 TGCCGCTGAAGAAGATACCCTCAACCGCAGCAAATGCCACCAAACGTTCGGCGAA---TG 792 Query 37342 AACTATAATCAGAAATCCAtttttttGTCCAATCTGCCTTTAATTTAACACATTCAATTG 37401 ||| | | | | ||||| | ||| |||||||| || || || | Sbjct 791 AACAAGAGTTGGTGATCCAGCGCAGCGCCCACTCTGCCTTCTTCTTTACGGCGGGGATCG 732 Query 37402 TTTCAATTGCTTTTAAGAGAAAGtttttttCTTCACTATCTGTTATATAAGTATCAATTA 37461 | || || || || || || | ||| | | ||| | | | || || || || | Sbjct 731 TCTCTATCGCGTTGAAAAGCTCCTGTTTCTTTGTGCTACTTTTAACGTATGTGTCGATCA 672 Query 37462 GTAAACTATACATTTCAGAGTGAATATTTTCAATAGCTATCTGAAAACCATAAAAACACC 37521 | ||| || | || | |||||| || ||||| || |||||||| ||||| || || | Sbjct 671 AAAGACTGTAGGTCTCTGCGTGAATGTTCTCAATCGCGATCTGAAAGCCATAGAAGCAGC 612 Query 37522 TAGCTTCAGATAATTGAACATCGTTAAAAAACCTCTTAGCTAAGTTTTCATTAACTATCC 37581 || || | || ||| || || | || | | || | || ||||| || || | Sbjct 611 GGGCCTCTGGTATTTGTACCTCAGACATGAATCGAGTGGCGAGATTCTCATTGACGATAC 552 Query 37582 CATCACTAGCTGCAAAGAAAGCAAGAACATATTTTATAAAATGTCTTTC 37630 | || || |||||||| || || |||| | ||||| |||| ||| Sbjct 551 CGTCTGATGCGGCAAAGAATGCCAGCACATTGGTGATAAAGTGTCGTTC 503 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 592107808421080