Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acytostelium_20leptosomum_20[genbank_20GCA_5F900092245.1_202017-01- 02] 28,227 sequences; 57,256,845 total letters Query= NC_017972.1 Length=280538 Score E Sequences producing significant alignments: (Bits) Value seq9108 199 7e-46 >seq9108 Length=3693 Score = 199 bits (220), Expect = 7e-46 Identities = 295/408 (72%), Gaps = 15/408 (4%) Strand=Plus/Plus Query 22960 TAGGAAACTTCGCACTCTTCATCAGATTCAAAGAACAGAATTTGTGCGCAACCTTCGCCA 23019 ||||| |||||||||||||| || ||||| |||||||| || || || |||||| Sbjct 1946 TAGGACACTTCGCACTCTTCGTCGGATTCGAAGAACAGCATCTGCGCCACGCCTTCGTTG 2005 Query 23020 GCGTAGATCAGTGCCGGGCTTGGT-GTGGTATTGGAAAACTCCAGAGTAAGCGAG-CCTT 23077 |||||||| |||| ||| ||| ||||| ||||| |||||||| || | || | |||| Sbjct 2006 GCGTAGATTTTTGCC-GGCAAGGTGGTGGTGTTGGAGAACTCCAGGGTGA-CGTGCCCTT 2063 Query 23078 TCCATTCTGGTTCCAGCGGCGTGACGTTTACGATGATGCCGCAACGCGCATACGTCGATT 23137 |||||| || ||||||||||| ||||| |||||||||||||| ||||| || || || Sbjct 2064 CCCATTCCGGCTCCAGCGGCGTCACGTTGACGATGATGCCGCAGCGCGCGTAGGTGCTTT 2123 Query 23138 TGCCGAGGCAGATAACTAATACGTCACGCGGAATGTTGAAGTGTTCCGGCGTGTTTGCCA 23197 |||| ||||||||| | || | |||||| || |||| ||| ||| |||| Sbjct 2124 TGCCCAGGCAGATAGTCAGGACATTACGCGGGATACGGAAGAATTCGACGGTGCGCGCCA 2183 Query 23198 GTGCGAAACTGTTCGGCGGAATGAT-CAGGCCTTGGCCGTTTGGAACGTGCTTCGTAACG 23256 | || || ||| ||||| ||||| ||| | | | | ||| ||| ||| ||| Sbjct 2184 GGGCAAAGGAGTTTGGCGGGATGATGCAGACGTCG--CTCTTG--ACG----TCG--ACG 2233 Query 23257 AAATTGTCTTCGGTGAAATTCTTTGGATCGACAACCGCGTTATTCAGGTTGGTGAAAACC 23316 || | | |||| ||| || || |||||||| || || | ||||||||| ||| Sbjct 2234 AAGCTTTTTTCGTCGAAGTTTTTCGGATCGACGGTTGCCGAGTTGATGTTGGTGAACACC 2293 Query 23317 TTGAATTCGTTACCGCAACGAATATCGTAGCCGTAGCTGGAAACACCG 23364 ||||| || | |||| || | |||||||||||||||||||| ||| Sbjct 2294 TTGAACTCATCGGCGCAGCGTACGTCGTAGCCGTAGCTGGAAACCCCG 2341 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 897276895318160