Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acytostelium_20leptosomum_20[genbank_20GCA_5F900092245.1_202017-01- 02] 28,227 sequences; 57,256,845 total letters Query= NC_017974.1 Length=149273 Score E Sequences producing significant alignments: (Bits) Value seq3869 226 3e-54 seq1762 100 3e-16 seq85 87.8 2e-12 >seq3869 Length=8584 Score = 226 bits (250), Expect = 3e-54 Identities = 305/425 (72%), Gaps = 0/425 (0%) Strand=Plus/Plus Query 118117 GATGTCGTCAAAGACGATCGACGGATCTGCCAGGATGTTACGGATGATATGGGTGTATGA 118176 ||||||||| || ||| ||| ||| || | |||||| |||||||| || ||||| || Sbjct 2572 GATGTCGTCGAACACGGTCGCCGGGTCGTTGACGATGTTGCGGATGATGTGAGTGTACGA 2631 Query 118177 GCGAGAGTGGATAGTCTCACTGAACGCCCAAGTCTCGACCCATGTTTCCAGGGTTGTGTC 118236 || ||||| || ||||| ||| ||||| || || ||||| || ||||| | | Sbjct 2632 ACGCGAGTGAATGGTCTCGGAGAAGGCCCAGGTTTCTACCCAGGTCTCCAGCTCCGGGAT 2691 Query 118237 GGACACGATCGGGAGCAGAACTGCATTCGGCCCACGGCCCTGTACAGAATCCAGAAGGAT 118296 ||| | | ||| |||| | ||||||| | ||||||||| | || || || || | Sbjct 2692 GGAGATCAGCGGCAGCAACGCCACATTCGGGCTACGGCCCTGGATGGAGTCGAGCAGCGT 2751 Query 118297 CTGGTACTTCAGGTTGCTGATGAAGATGTGCTTCTCGTGATCCGGCAGATTCATGTAGTC 118356 |||||||||||||||||||||||| || || || || || |||||||| | |||||| Sbjct 2752 CTGGTACTTCAGGTTGCTGATGAAAATATGTTTTTCATGTTCCGGCAGCGCCTGGTAGTC 2811 Query 118357 GATACGGTCACGGGTCACGTTAACTTCTTCCGGACGCCAGAAGAACGCCAGTTGCTTCTC 118416 ||| || || |||| |||| ||| |||||||| ||||||||||| | || ||||| || Sbjct 2812 GATGCGATCGCGGGAAACGTCAACCTCTTCCGGGCGCCAGAAGAAGGAGAGCTGCTTTTC 2871 Query 118417 GATCAGCTTCTCGAACTTGGCGTGTTTCTGCTGGTCATAGCGAGAAACGTTCGGTGTCTC 118476 |||||||| || || || ||| ||| ||||| || ||||| | ||||| | || Sbjct 2872 AATCAGCTTTTCAAAGATGTCGTATTTTTGCTGATCGTAGCGGGCCACGTTAACCGGCTG 2931 Query 118477 GCCGAGGAACATCGGCTGAGTCAGGAAATCGAATTTGTTCTGGTTGAAAGTGCTGTAAGA 118536 ||| | ||||| || | ||| |||| ||| |||| |||||| |||| | Sbjct 2932 GCCAAAAAACATAGGTTCCAGCAGCTGATCGTTTTTCGTCTGTGAAAAAGTGGTGTATGC 2991 Query 118537 CATTG 118541 ||||| Sbjct 2992 CATTG 2996 Score = 203 bits (224), Expect = 3e-47 Identities = 859/1330 (65%), Gaps = 64/1330 (5%) Strand=Plus/Plus Query 119159 CGAGGTGGCTCAAAACCATTCGTGGAGTTAGTGATCTGGCTGGATGTCTCGCAAGGCATC 119218 || || ||||||| || || |||| ||| | |||||| || |||||| | |||||| Sbjct 3466 CGCGGCGGCTCAATGCCGTTGGTGGCGTTGGAGATCTGCGACGAGGTCTCGGACGGCATC 3525 Query 119219 ATCGTGGACAGCGTGGAGTTACGCAGGCCATGAATCGCGATATCGACACGCAGCTTTTCC 119278 | | ||| ||||| ||||| |||||||| ||| | || | |||| |||| Sbjct 3526 AGTGCGGAGAGCGTTGAGTTGCGCAGGCCGTGAGTTTTAATGGACTCGCGCAATGCTTCC 3585 Query 119279 CAGTCCATCTTCAGT--TCCGCAGTGTGGAGAGCATCCACCTCTTTTTTGTAACGGTCGA 119336 ||||| | ||| | ||| || || | |||| ||||| || || |||| Sbjct 3586 CAGTCGTAGTGCAGGGGTTCGC--TGACGATGCCGTCCAGATCTTTCTTATAGGTATCGA 3643 Query 119337 TCGGCAGAATGCCCTGAGAGTAAGTTGTCTCGTGGAAGAGATCACATTTGCCCAGTTCTT 119396 ||||||| |||||||| | || || || |||| ||| || ||| | || Sbjct 3644 TCGGCAGGATGCCCTGCGCATAGGTGGTTTCGTTGAACCACGGGCAGGCGCCTTGCTCGA 3703 Query 119397 TTGCCAGGTCAACCGACGCTTCCAGTAGGTAATACTGGAATGCTTCAGCCAGTTCGTGAA 119456 | ||||| || || || | ||| || || ||||| | ||||| | || ||| Sbjct 3704 TAGCCAGCTCGTTAGAGGCCTTCAGCAGATAGTACTGAATCGCTTCGAACGTTTTGTGCG 3763 Query 119457 -CAGCGTTAGCTGCACGAGGGTCGCTGTACTTCATCCCGCGCTTCGCCAGGTAGTACGCG 119515 ||| ||| || | |||| ||| | || |||||||||| ||||| ||| Sbjct 3764 TCAG-GTTGTTGGCGCTGCCGTCGGAGTAGCGTTTGCCATGCTTCGCCAGATAGTAAGCG 3822 Query 119516 AGGTTGGTCCAGCCAATCCCCAGTGTACGGCGCAGCTTGGT--CTTCTCT-GCCGCCAGA 119572 | |||| || ||| || ||||| ||||| ||| | | | | | | |||||| | Sbjct 3823 AAGTTGATCACGCCGATACCCAGCGTACGACGCCCCATCGCGCCGCGTTTAGCCGCCGGG 3882 Query 119573 ACCGGGTAGTTCTGATAGTCCAGCAGTCGGTCCAGAGCACGAACC-AGTGTACGGACAGG 119631 | ||||| | ||||||||| ||||| ||||||||||| ||| | || | || | Sbjct 3883 ATGGGGTAATCCTGATAGTCGAGCAGCGCATCCAGAGCACGCACCGCCAGCACTGCCA-G 3941 Query 119632 CTCACGCATGTCTTCCAGCTTCTCGATCTTGCCAAGGTTAATGGCAGACAGAGTACACAG 119691 ||| || || || || | ||||| || ||||| | ||| ||||| || ||||| Sbjct 3942 CTCTTCCAGCTCGTCGAGGCTGTCGATAGCCCCGAGGTTGAAGGCCGACAGGGTGCACAG 4001 Query 119692 GGCTACCTCGCCCGGGTCTTCTGGATCGTTAATGTCGTTGATCGGATGCGTCGGCAGCGC 119751 || | ||||| || ||| ||||| | || | | ||| | |||||||| || Sbjct 4002 CGCGATTTCGCC---GTTTTC---GTCGTTGACATCTTCCAGCGGTTTGGTCGGCAGAGC 4055 Query 119752 GATCTCCATACACAGGTTGGACTGCTTCACCGGGGCCTGTTTAGGGTCAAACGGGCTGTT 119811 ||||||| |||||||| ||||| ||||||||| | || || |||||||||| Sbjct 4056 AATCTCCAGGCACAGGTTAGACTGACGCACCGGGGCGACTACCGGATCGAACGGGCTGTG 4115 Query 119812 GGTATTACAGTGGTCAACGTGCTGAACATAAATACGACCAGTTTGTGAACGCTCCTGCCC 119871 ||| || |||||||| |||| ||| | ||| || || || || | ||||||||| Sbjct 4116 GGTGTTGCAGTGGTCGACGTTCTGGATATAGATGCGGCCGGTAGAGGCGCGCTCCTGCAT 4175 Query 119872 AAAGACAGAGAATGCGTCCGCCGCAGGGATAGACTTCTTCGCCACGGAAGGATCTGCTTC 119931 | | ||||| || | || ||| || ||| || ||| | | | | || Sbjct 4176 CATCAGCGAGAACAGCTCAACGGCTTTAATACGCTGCTT----AC-GAATGCTGT-CGTC 4229 Query 119932 CAGTTCCT------CGTAAAGCTGTTGGAATTTCTCCTGATCAGAGAAGAAATATTCGTA 119985 | | || | ||| || | | || | |||||||| | |||||| || || Sbjct 4230 CTGCTCGTACTGGGTGTACAGGCGCTCAAACTCGTCCTGATCGGCGAAGAAGGCGTCATA 4289 Query 119986 CAGCTTACCGCCAGCCACGTTCGGATG----GAACAACGTGATGTTCTTGCCCTGCTGGA 120041 ||| ||| | ||| ||||| | ||||| || || | ||||| | | | Sbjct 4290 CAG------GCCCGGGACG-TCGGAAGGGCTGAACAGGGTAATATCGCCGCCCTTCAGCA 4342 Query 120042 GGCGGGTATAAAGCAGCTTGTTGATCTGGAGGCCGTAGTCCACATGGCGAGCACGAGTGC 120101 | ||||| || | ||||||||||||||| | |||||||||| || ||| | || || Sbjct 4343 GACGGGTGTACATCAGCTTGTTGATCTGTACCCCGTAGTCCATGTGACGAACGCGGTTGG 4402 Query 120102 TCTCGGTGCCACGGTTGTTCTTCAGAACGATCAGGCTCTCAAAATCCCAGTGCCACATCG 120161 ||||| ||||||||||| ||||| || | |||||| || | ||| |||||||| | Sbjct 4403 CGTCGGTACCACGGTTGTTTTTCAGCACCAGCAGGCTTTCCACTTCCAGATGCCACATTG 4462 Query 120162 GGTAGAAATAGTTAGCCGATGCCTTACGGACGCCGCCCTGAGAG-----GTCCACCCAAG 120216 ||||||| | | |||| | || ||||||||||| ||| | |||| | Sbjct 4463 GGTAGAAGAGGGTTGCCGCGCCGCCGCGCACGCCGCCCTGCGAGCAGGATTTCACC---G 4519 Query 120217 AGACTCTTGGTACATGC--GGACAATCGGCACGGTGCCTGCGTGTTTAACCTCACCACCA 120274 | ||| | | |||| | | || ||| | | ||| | ||| | || || || Sbjct 4520 CG-GTCT--GGAAATGCTTGTAGAA-CGGAATGCAGCCGGTGTGGAAGGCTTCGCCGCCG 4575 Query 120275 CGAAT--GGCAGAATCCTGACCACGAATCATGCCGAAGTTCAGGCCGATCCCGGCTCGTT 120332 || || ||| | || | | ||||| ||| ||| | |||||| ||||| || | Sbjct 4576 CGGATCGGGCTG--CCCAGCGCGCGAATGCGCCCGGCGTTGATGCCGATGCCGGCGCGCT 4633 Query 120333 GAGCCGCATATTT-ACCCT-GCGC-CGTGTTGGCGTTAAAGATCTGGTCGATATTATCAC 120389 | | | ||||| || | |||| | | ||||||| ||| || | | || | Sbjct 4634 GGGAAACGTATTTCACAATCGCGCTGGAGGTGGCGTT---GATGGAATCCAGGCTGTCGC 4690 Query 120390 CAGACTCAATCAGTACGCAAGAGCTAAACTGACGGGTCGGGGTACGAACACCCGCCATGA 120449 | |||| ||||| ||||| ||||| ||||||||||| |||||||| || || | ||||| Sbjct 4691 CGCACTCGATCAGCACGCAGGAGCTGAACTGACGGGTTGGGGTACGCACGCCGGACATGA 4750 Query 120450 TCGGGGTCGG 120459 |||| ||||| Sbjct 4751 TCGGCGTCGG 4760 Score = 152 bits (168), Expect = 5e-32 Identities = 350/520 (67%), Gaps = 13/520 (3%) Strand=Plus/Plus Query 117479 GAATCAACCTGGCCGGACAGATACTGACCGTTCTCGGTTTCCTGCGGTGTTACCTGCACA 117538 ||||| | ||||||| ||||| || | || ||||||||| | ||||| || Sbjct 1904 GAATCGATCTGGCCGACGAGATAAGAACTGACTTCCACTTCCTGCGGCGCCACCTGAACG 1963 Query 117539 TTCCCGGTATTCAGGTGGCTGTTGATCCAAGGGATTGGGTTCTTGGTCGGTTTCCCGATC 117598 || ||| ||| | |||||||||| ||||| ||||| | ||| | | || | Sbjct 1964 TTGTCGGAGACCAGCCAGGTGTTGATCCATGGGATCGGGTTGGAG--CGGGT-CTGGAAC 2020 Query 117599 AGTTCACCAAGGCCAACCGCCCGCATACGTTGATCTGTGATGTAGTCGATGTAACCGTCC 117658 | | | ||||| |||||| |||| || || |||||||| |||| ||| | Sbjct 2021 GGCAGATCGAGGCCCACCGCCTGCATGCGGATATTGGTGATGTACTCGACGTACTGGCAG 2080 Query 117659 AGCATACCTTTGTTCAGACCGATCATCGAACCGTCTTTGAACAGGAAGCTGCCCCAGTCT 117718 || ||| |||| ||||| ||||||||||| ||||| ||||||| || |||| ||| Sbjct 2081 AGAATATCTTTATTCAGGCCGATCATCGAGCCGTCGCGGAACAGGTAGTCCGCCCACTCT 2140 Query 117719 TTCTCCTGCACCGATGCGTCGATAAAGCCCTGTCGT-GC-CTCTTCGTAGCAATCCTCTG 117776 ||||||||| || || | || | ||| | || ||| | | ||| || || | Sbjct 2141 TTCTCCTGCTGCGCCGCCAGCACGAA--CAGGTCATAGCACTCCTGCTTGCACTCTTCGG 2198 Query 117777 CCACACGAGCAAA---CAGATCACCTTCGTTACCGTTCTGCATTTCTTTCAGCATATACT 117833 | | || | | |||| ||| | ||| ||| |||||||||| || Sbjct 2199 CGATTTCCGCCATTTCCGGATCG---TCGCTGCCGGAGCGCAGCAGGTTCAGCATATGCT 2255 Query 117834 GAGTGCCGGACAAATGCAAGGCTTCATCACGGGCAATCAGTTCAATAATGTTGGTGTTGC 117893 | ||||||| || |||| |||||||| ||||| ||||| ||||| |||| ||||| Sbjct 2256 GGGTGCCGGTCAGGTGCAGCGCTTCATCGCGGGCGATCAGGCGGATAATTTTGGCGTTGC 2315 Query 117894 CCAGCATTACCCCGCGCTCGCCGAACGCAAATGAGCAGGCGAAGCTCACGTAGAAGCGGA 117953 | ||| | ||| ||| | || || || |||||||||||||| ||||||||||||| Sbjct 2316 CTTCCATCAGTTTGCGTTCGGCAAAGGCGAAGGAGCAGGCGAAGCTGACGTAGAAGCGGA 2375 Query 117954 TCGCTTCCAGTGCGTTGATATTGTGCAGGCACAGGTACAG 117993 |||||||||| || || | | ||||||||| || || Sbjct 2376 TCGCTTCCAGGGCATTAACGCTCATCAGGCACAGATAGAG 2415 >seq1762 Length=3150 Score = 100 bits (110), Expect = 3e-16 Identities = 230/339 (68%), Gaps = 7/339 (2%) Strand=Plus/Plus Query 111101 CCGCCGTATGGGTCGATGTATTCCCCGGTCTCCAGATCCTTTGCGATCGCATTAATGGTC 111160 |||||||| |||||||| ||| | | ||| || |||| |||| || || | ||| Sbjct 1196 CCGCCGTAGGGGTCGATA-ATTGCGCCGTCGGCA--TCCTGGGCGAGGGCGTTGACCGTC 1252 Query 111161 AAGTCCCGGCGGGCCAAATCCTCTTCGATGGTCACATCTGGG-CTGAACATCACCTCGAA 111219 | ||| ||||| || ||| |||||| ||| || || ||| | | | | || | || Sbjct 1253 AGGTCGCGGCGCAGCAGATCGGCTTCGAGGGTGACGTCCGGGGCGGCATAGCAGGTA-AA 1311 Query 111220 ATCGTGGTATCCTGCGCCAGTTGAACGCTCGGTACGGGCAAGGACGTACTCTTCCTTGGT 111279 | || || || ||||| | | |||||||| ||||| ||| | ||||||||| | | Sbjct 1312 ACCGGTATAGCCCGCGCCGGATTTGCGCTCGGTGCGGGCCAGGGCATACTCTTCCCGGCT 1371 Query 111280 CTCAGGATGCAGGTAAACTGGGAATGCGGCACCGACTTGCTCGAAGCC-GAGTGCCATCA 111338 | ||||| ||| | || || || || || || || | |||| | || | | || Sbjct 1372 TTGCGGATGGAGGAACACGGGAAAATCGCGGCCTACCTGTTGATAGCCCGCGT-CTAGCA 1430 Query 111339 TCTCTTCGTGGGTGGAGCCGACCACAACGTAGTCACGGTCTTTGCTCTCAACACCCATCA 111398 ||| || |||||| ||| ||||| || |||| ||||||||| | | || | || Sbjct 1431 TCTGTTGCGGGGTGGCGCCCACCACCACCCAGTCTCGGTCTTTGACCGGCAGCCCTAACA 1490 Query 111399 GTTCATCGCGGACCGCGCCGCCGACCAGATAGATTTTCA 111437 | | || || |||||||| ||||||||||| | |||| Sbjct 1491 GCGCGTCACGCACCGCGCCACCGACCAGATAACTCTTCA 1529 >seq85 Length=367292 Score = 87.8 bits (96), Expect = 2e-12 Identities = 63/72 (88%), Gaps = 2/72 (3%) Strand=Plus/Minus Query 146795 GAACA--ATACGGTGTATAGCGCAGCCTGGTAGCGCATCTGGTTTGGGACCAGAGGGTCG 146852 ||||| |||||| | ||||||||||||||||||||||||||||||||||||||||||| Sbjct 147046 GAACATGATACGGAGCGTAGCGCAGCCTGGTAGCGCATCTGGTTTGGGACCAGAGGGTCG 146987 Query 146853 CTGGTTCGAGTC 146864 |||||| || Sbjct 146986 GGAGTTCGAATC 146975 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 477377104004360