Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acytostelium_20leptosomum_20[genbank_20GCA_5F900092245.1_202017-01- 02] 28,227 sequences; 57,256,845 total letters Query= NC_018088.1 Length=104936 Score E Sequences producing significant alignments: (Bits) Value seq3869 174 1e-38 >seq3869 Length=8584 Score = 174 bits (192), Expect = 1e-38 Identities = 342/506 (68%), Gaps = 0/506 (0%) Strand=Plus/Minus Query 71158 CCAACACCTATTATGGGTGGTGTACGTACTCCAACAAGACAATTTAGTAGTTGTGTAAAG 71217 || || || || ||| || || ||||| ||||| | || || || || || | Sbjct 4760 CCGACGCCGATCATGTCCGGCGTGCGTACCCCAACCCGTCAGTTCAGCTCCTGCGTGCTG 4701 Query 71218 ATTGACAGTGGCGATAGCCTAGATTCAATTAATGCCTCTTCAAGTTCAATTGTTAAGTAT 71277 || || | ||||| ||||| ||||| || || ||| | || || | ||||| || || Sbjct 4700 ATCGAGTGCGGCGACAGCCTGGATTCCATCAACGCCACCTCCAGCGCGATTGTGAAATAC 4641 Query 71278 GTATCCAAACGTGCAGGTATCGGTATCAATGTTGGCAAAATTCGTGCATTAGGAAGTCCT 71337 || ||| | || || || ||||| ||||| | || ||||| || | || || || Sbjct 4640 GTTTCCCAGCGCGCCGGCATCGGCATCAACGCCGGGCGCATTCGCGCGCTGGGCAGCCCG 4581 Query 71338 ATACGCAATGGTGAAGCAGTTCATACTGGTTTAATACCATTCTTAAAGCATTTCCAAACA 71397 || ||| || ||||| | || || || | || || |||| ||||||||||| || Sbjct 4580 ATCCGCGGCGGCGAAGCCTTCCACACCGGCTGCATTCCGTTCTACAAGCATTTCCAGACC 4521 Query 71398 GCAGTCAAATCTTGCTCTCAGGGAGGCTTACGTGGTGGTGCTGCTACAGCGTTCTACCCT 71457 || || ||||| ||||| ||||| ||| | || || || || || || |||||||| Sbjct 4520 GCGGTGAAATCCTGCTCGCAGGGCGGCGTGCGCGGCGGCGCGGCAACCCTCTTCTACCCA 4461 Query 71458 ATGTGGCATTTAGAAGTTGAAAGCCTTTTAGTATTGAAAAATAACAAAGGTGTTGAAGAT 71517 ||||||||| | ||||| |||||||| | || ||||||| ||| ||| || | Sbjct 4460 ATGTGGCATCTGGAAGTGGAAAGCCTGCTGGTGCTGAAAAACAACCGTGGTACCGACGCC 4401 Query 71518 AACCGTGTACGTCATTTAGACTATGCTGTGCAATTCAATAAGCTTATGTACCAACGATTG 71577 ||||| || ||||| | ||||| | || || |||| ||||| |||||| || || Sbjct 4400 AACCGCGTTCGTCACATGGACTACGGGGTACAGATCAACAAGCTGATGTACACCCGTCTG 4341 Query 71578 ATTACAGGTGGCAATATTACATTGTTCTCACCTAATGCAGTTGAAGGTTTATATGACTCA 71637 | | || ||| ||||||| ||||| ||| | || || | |||||| | Sbjct 4340 CTGAAGGGCGGCGATATTACCCTGTTCAGCCCTTCCGACGTCCCGGGCCTGTATGACGCC 4281 Query 71638 TTCTTTGCCGACCAAGATAAGTTTGA 71663 ||||| ||||| || || ||||||| Sbjct 4280 TTCTTCGCCGATCAGGACGAGTTTGA 4255 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 335554923822859