Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acytostelium_20leptosomum_20[genbank_20GCA_5F900092245.1_202017-01- 02] 28,227 sequences; 57,256,845 total letters Query= NC_018282.1 Length=61167 Score E Sequences producing significant alignments: (Bits) Value seq345 96.9 1e-15 >seq345 Length=175672 Score = 96.9 bits (106), Expect = 1e-15 Identities = 178/259 (69%), Gaps = 3/259 (1%) Strand=Plus/Plus Query 4999 AGGCCGCGCTGCTCGTGGTGGATGAGTATTCCATGATTGACGAGCAGATGGGGGAGGACT 5058 ||||| |||| |||| || || |||| || ||| | ||||| ||| | || || Sbjct 165531 AGGCCAAGCTGATCGTCGTCGACGAGTGCTCGATGGTGGACGAACAGCTCGGCCGCGATC 165590 Query 5059 TGCTCAGCTTCGGTTGCCCGATCCTCGCCCTGGGCGATCCCGGACAGCTCCCGCCCGTGG 5118 | | |||||||| ||| || || | |||||||| || || ||||| |||||| | Sbjct 165591 TCATGAGCTTCGGCACCCCCATTCTGGTGCTGGGCGACCCTGGCCAGCTGCCGCCCATAT 165650 Query 5119 GCGGCACCCCCTTCTTCAA-GAACA--AGCCCGACATCCTGCTCACGGAGATTCACCGCC 5175 |||| | |||||||| ||||| |||| || ||||||||| || || ||||| | Sbjct 165651 CCGGCGGCGGCTTCTTCACCGAACACGAGCCGGATTTCCTGCTCAGCGAAATCCACCGGC 165710 Query 5176 AGGCCCAGGACAACCCGATCATCTGGATGTCCAAGGAGGTCCGCGAGGGCCGCGTGCTCC 5235 |||| | |||||||||||| | | || | || || |||||||| || | || Sbjct 165711 AGGCGCGCGACAACCCGATCCTGCGCCTGGCGCTCGACGTGCGCGAGGGACGTGAATTCG 165770 Query 5236 GCCCCGGCGACTACGGTGC 5254 || ||||| | |||||| Sbjct 165771 GCTATGGCGATTTCGGTGC 165789 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 195547231445246