Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acytostelium_20leptosomum_20[genbank_20GCA_5F900092245.1_202017-01- 02] 28,227 sequences; 57,256,845 total letters Query= NC_018504.1 Length=123876 Score E Sequences producing significant alignments: (Bits) Value seq8653 134 1e-26 seq3381 134 1e-26 >seq8653 Length=1535 Score = 134 bits (148), Expect = 1e-26 Identities = 167/229 (73%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 101241 TTCCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGG 101300 ||||||| | | ||| | || || || |||||||| || || || || ||||| ||| Sbjct 192 TTCCTCCACGGAGACGCAGCACCAAGTGGAGGGTAGACTCCTTCTGAATGTTGTAGTCGC 251 Query 101301 CGATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCG 101360 ||| ||| | | || || | |||||| || ||||| |||||||| ||||||||||| | Sbjct 252 CGAGAGTGCGACCGTCTTCAAGTTGCTTGCCGGCAAAGATCAAACGTTGTTGATCGGGTG 311 Query 101361 GAATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCA 101420 | || |||||||| |||||||| ||| || || | || | ||||||||| || | Sbjct 312 GGATACCTTCTTTGTCTTGAATCTTTGCCTTGACGTTCTCGATAGTGTCAGAGCCCTCGA 371 Query 101421 CTTCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 | || || |||| || || || || || || |||||||| || ||||| Sbjct 372 CCTCTAGTGTGATGGTCTTTCCAGTCAATGTCTTTACAAAGATTTGCAT 420 >seq3381 Length=12314 Score = 134 bits (148), Expect = 1e-26 Identities = 155/209 (74%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 101261 ACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCC 101320 || || |||||||| || ||||| || || ||||| || ||| || | |||| ||| Sbjct 1167 ACCAAGTGAAGGGTGGACTCTTTCTGGATGTTGTAGTCACCGAGGGTACGACCATCTTCC 1108 Query 101321 AATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGA 101380 |||||||| || ||||| || | |||||| || ||||| ||||| ||||| || |||||| Sbjct 1107 AATTGCTTTCCAGCAAAAATGAGACGCTGCTGGTCGGGTGGAATACCTTCCTTGTCTTGA 1048 Query 101381 ATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTG 101440 || || || ||| | || | ||||| || || || |||||||||| ||| ||| Sbjct 1047 ATCTTAGCCTTGACATTCTCAATGGTGTCCGAGCCCTCAACCTCAAGAGTGATCGTCTTG 988 Query 101441 CCGGTTAAAGTTTTTACAAATATCTGCAT 101469 || || | ||| || ||||| |||||||| Sbjct 987 CCAGTGAGAGTCTTGACAAAGATCTGCAT 959 Score = 122 bits (134), Expect = 7e-23 Identities = 153/210 (73%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 101260 AACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTC 101319 ||| || || || |||||||| ||||| || ||||| ||| | | ||| | | |||| || Sbjct 1624 AACCAAGTGGAGAGTAGATTCCTTTTGGATGTTGTAGTCGCCAAGAGTGCGGCCATCCTC 1565 Query 101320 CAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTG 101379 | ||||| || ||||| ||||||||||| || ||||| || || || || |||||||| Sbjct 1564 GAGCTGCTTGCCAGCAAAGATCAAACGCTGCTGGTCGGGTGGGATACCCTCCTTATCTTG 1505 Query 101380 AATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTT 101439 || ||| ||||| | || | || ||||| ||| || || ||||||| || || Sbjct 1504 GATCTTTGCCTTTACGTTCTCAATGGTATCAGAGCCTTCAACCTCGAGAGTGATAGTCTT 1445 Query 101440 GCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 || || | ||| || || || |||||||| Sbjct 1444 ACCAGTAAGAGTCTTGACGAAGATCTGCAT 1415 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 396142073667039