Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acytostelium_20leptosomum_20[genbank_20GCA_5F900092245.1_202017-01- 02] 28,227 sequences; 57,256,845 total letters Query= NC_018843.1 Length=103299 Score E Sequences producing significant alignments: (Bits) Value seq3869 713 0.0 >seq3869 Length=8584 Score = 713 bits (790), Expect = 0.0 Identities = 1271/1838 (69%), Gaps = 54/1838 (3%) Strand=Plus/Minus Query 68245 GCGCGACGAATACTTCGGCTATGCCGCCACCGTGCAGCTGGCGAGCAAGTATCTCGTTCA 68304 ||||||| ||||| ||| || ||| |||||||| |||||||||| || || Sbjct 4968 GCGCGACATGAACTTCTCCTACGCAGCCGTTAAGCAGCTGGAAGGCAAGTATCTGGTACA 4909 Query 68305 AAACCGTGTAACTGGCGCTATCTACGAAGGGCCACAGCAACTCTACATGCTGGTCGGCAT 68364 |||||| || || |||| || || || | | ||| ||||| || ||||||| | Sbjct 4908 AAACCGCGTCACCGGCGAAATTTATGAGAGCGCGCAGTTCCTCTATATTCTGGTCGCCGC 4849 Query 68365 GTGCCTGTTCCAGAATTGGGAAGATGGCTGCGCCGGTAAGACGCGTCTGGAGATGGTTAA 68424 ||||||||| ||| | || | |||| | ||||||||||| | || Sbjct 4848 TTGCCTGTTCTCGAACT------AT--CCGCGCG----AAACGCGTCTGGACTATATCAA 4801 Query 68425 GGGCTTCTACGATG---TGACCAGTACATTCAAGTTGTCTCTGCCAACGCCAATTATGGC 68481 | | |||||||| | || ||| | || || | || ||||| ||||| || ||| | Sbjct 4800 GCGTTTCTACGACGCGGTGTCCA---CCTTTAAAATCTCGCTGCCGACGCCGATCATGTC 4744 Query 68482 CGGCGTGCGCACCCCTACTCGCCAGTTCTCCAGCTGCGTGCTGATTGAA-GCTGCTGATA 68540 ||||||||| ||||| || || |||||| | |||||||||||| || || || || | Sbjct 4743 CGGCGTGCGTACCCCAACCCGTCAGTTCAGCTCCTGCGTGCTGATCGAGTGCGGC-GACA 4685 Query 68541 GTCTGAAAGGGATTAGCGCTGCGTCTTCCGCAATCATCGACTACGTGTCACGTCGCGCGG 68600 | ||| | || | ||| | || ||| || | | ||||| || | ||||| | Sbjct 4684 GCCTGGATTCCATCAACGCCACCTCCAGCGCGATTGTGAAATACGTTTCCCAGCGCGCCG 4625 Query 68601 GCATTGGTATTGGCTTTGGGCGTCTGCGTGCGCTGGGCAGTGAGATCCGCAATGGCGAGG 68660 |||| || || | ||||| | || ||||||||||| ||||||| ||||| | Sbjct 4624 GCATCGGCATCAACGCCGGGCGCATTCGCGCGCTGGGCAGCCCGATCCGCGGCGGCGAAG 4565 Query 68661 CCACCCACACTGGCGTTTTTCCATTCCTGAAACACTTCCAGACGGCGGTGAAATCCTGCT 68720 || |||||| ||| |||| ||| || || |||||||| |||||||||||||||| Sbjct 4564 CCTTCCACACCGGCTGCATTCCGTTCTACAAGCATTTCCAGACCGCGGTGAAATCCTGCT 4505 Query 68721 CTCAGGGCGGTGTTCGCGGCGGCGCTGCTACAGCGTTCTATCCGATCTGGCACTTGGAAG 68780 | |||||||| || ||||||||||| || || ||||| || || ||||| |||||| Sbjct 4504 CGCAGGGCGGCGTGCGCGGCGGCGCGGCAACCCTCTTCTACCCAATGTGGCATCTGGAAG 4445 Query 68781 TTGAAAGTCTGCTGGTGCTGAAAAACAACCGTGGCATTGAAGAGAACCGCGTTCGTCATC 68840 | ||||| |||||||||||||||||||||||||| | || | |||||||||||||| Sbjct 4444 TGGAAAGCCTGCTGGTGCTGAAAAACAACCGTGGTACCGACGCCAACCGCGTTCGTCACA 4385 Query 68841 TCGACTATGGCGTGATGATCAACCGTCTGATGTATCGCCGCCTGGTGCGCAACGAAAACA 68900 | ||||| || || ||||||| |||||||| ||| ||| || || | | Sbjct 4384 TGGACTACGGGGTACAGATCAACAAGCTGATGTACACCCGTCTGCTGAAGGGCGGCGATA 4325 Query 68901 TTACGCTGTTCAGCCCACACGATGTGCCGGGCCTGTACGACGCGTTCTTTGTTGATCAGG 68960 |||| ||||||||||| ||| || ||||||||||| ||||| ||||| | ||||||| Sbjct 4324 TTACCCTGTTCAGCCCTTCCGACGTCCCGGGCCTGTATGACGCCTTCTTCGCCGATCAGG 4265 Query 68961 ACAAGTTCGAAGAGCTGTACCTGAAGTACGAAGCCGACGAGAGCATCCGTAAGAAATCTA 69020 || |||| || |||||| ||||||| ||||| ||||| |||||| | || Sbjct 4264 ACGAGTTTGAGCGCCTGTACACCCAGTACGAGCAGGACGACAGCATTCGTAAGCAGCGTA 4205 Query 69021 TCCCGGCCGTCGACCTGTTCTCTACGCTGATGCAGGAGCGTGCCTCCACTGGTCGTGTTT 69080 | ||||| || |||||||| | ||||||||||||| ||||| || || || | | Sbjct 4204 TTAAAGCCGTTGAGCTGTTCTCGCTGATGATGCAGGAGCGCGCCTCTACCGGCCGCATCT 4145 Query 69081 ATATTGCCAACGTCGACCACATGAACGATCACGGCGCATTCGTTCCGGAAATTGCACCGG 69140 |||| |||||||||||| ||| ||| || | |||| ||||| | | || |||| Sbjct 4144 ATATCCAGAACGTCGACCACTGCAACACCCACAGCCCGTTCGATCCGGTAGTCGCCCCGG 4085 Query 69141 TACACCAGTCCAATCTCTGTATGGAGATCACGCTACCGACCAAGCCACTG---GCGTTCA 69197 | | ||||| || || || ||||||| | || |||||||| || ||| | ||| Sbjct 4084 TGCGTCAGTCTAACCTGTGCCTGGAGATTGCTCTGCCGACCAAACCGCTGGAAGATGTCA 4025 Query 69198 CTGACGATCCGAACGGGGAAATCGCGCTTTGCACCCTGTCTGCGTTCAACCTGGGCGCGA 69257 ||||| ||||| ||||||||||| ||||||||||| || |||||||| || || | Sbjct 4024 ACGACGA---AAACGGCGAAATCGCGCTGTGCACCCTGTCGGCCTTCAACCTCGGGGCTA 3968 Query 69258 TCCGCACGCTGGACTCACTGAAAGACGTGGCGTTTTACGCTGTGGCGGCACTGGACTCTC 69317 || || || ||| ||| |||| |||| | || ||| || ||||| | | Sbjct 3967 TCGACAGCCTCGACGAGCTGGAAGAGCTGGCAGTGCTGGCGGTGCGTGCTCTGGATGCGC 3908 Query 69318 TGCTCGACTATCAGGACTACCCTATGGCTGCTGCAGAAATCCCGGCTAAAGCTCGTCGTA 69377 |||||||||||||||| ||||| || | || || || | || | | ||||||| Sbjct 3907 TGCTCGACTATCAGGATTACCCCATCCCGGCGGCTAAACGCGGCGCGATGGGGCGTCGTA 3848 Query 69378 GTCTGGGTATTGGCGTGACCAACTTTGCTTACTATCTGGCGAAGAACGGCTTTAACTACT 69437 |||||||| ||||||| |||||| |||||||||||||||||| | ||| ||||| Sbjct 3847 CGCTGGGTATCGGCGTGATCAACTTCGCTTACTATCTGGCGAAGCATGGCAAACGCTACT 3788 Query 69438 CTGAC-GCTGCGGGCAACCAGCTGGTGCATGAGACCTTCGAAGCCATTCAGTACTACCTG 69496 | ||| || || | |||| | ||| ||| | || |||||||| ||||||||||| ||| Sbjct 3787 CCGACGGCAGC-GCCAACAACCTGACGCACAAAACGTTCGAAGCGATTCAGTACTATCTG 3729 Query 69497 CTCGATGCGAGCTGCCGA-CTGGCCGAAGCGAAAGGTGCATGTGACTGGTTCTCCCACAC 69555 || || | || ||| ||||| | | |||| || || |||||| | | || Sbjct 3728 CT-GAAGGCCTCTAACGAGCTGGCTATCGAGCAAGGCGCCTGCCCGTGGTTCAACGAAAC 3670 Query 69556 CAAATACGCACAGGGCCAGCTGCCAGTCGACCACTATCGCAAAACGCTGGATACCAAC-C 69614 || || || |||||| ||||| |||| |||| ||| ||||| || | Sbjct 3669 CACCTATGCGCAGGGCATCCTGCCGATCGATACCTATAAGAAAGATCTGGACGGCATCGT 3610 Query 69615 CGGAGACATCTTTCGAGCTGAAAATGCCGTGGGAAGAGCTGCGTGGCCGTATCCGTGA-- 69672 | | || | | | | | | | ||||||| |||| || ||| | | Sbjct 3609 CAGCGAACCCCTGC------ACTACGAC-TGGGAAGCATTGCG----CGAGTCCATTAAA 3561 Query 69673 --GCATGGTCTGCGTAACTCAACTCTGACCGCTCAAATGCCGTGTGAGACGTCCAGCCAG 69730 || || ||||| |||||||| || |||| | ||||||| ||||| || ||| Sbjct 3560 ACTCACGGCCTGCGCAACTCAACGCTCTCCGCACTGATGCCGTCCGAGACCTCGTCGCAG 3501 Query 69731 ATCACCAACTCCACCAATGGTATTGAGCCGCCCCGCGGCC-CG---GTATCCGTGAAGTC 69786 ||| ||||| ||||||| || ||||||||||| ||||||| || ||||| || | Sbjct 3500 ATCTCCAACGCCACCAACGGCATTGAGCCGCCGCGCGGCCACGTGAGTATC----AAAGC 3445 Query 69787 TTCCAAAGACGGCATCGTGAAGATGGTCGTTCCAGACTTCGCTCAACTGAAAGACCAGTA 69846 ||||| ||||| ||| || ||| || || || | || | ||| | || || Sbjct 3444 GTCCAAGGACGGTATCCTGCGCCAGGTGGTGCCGGATTACGAAAACCTGCAGAACGCCTA 3385 Query 69847 CGAGTACCTGTGGGATATGCCGGATAACCGCGGCTATCTGACTAAGGTGGCCATCATTCA 69906 |||| |||||||| |||||| | ||| ||| |||||| ||||| ||||| || Sbjct 3384 CGAGCTGCTGTGGGAGATGCCGAACAACGACGGTTATCTGCAGCTGGTGGGTATCATGCA 3325 Query 69907 GAAGTTCTTCGATCAGGCCATCTCTGCGAACACCAACTACGACCCGACTCGCTTCCCTGG 69966 |||||| |||| ||| | |||||||| ||||| |||||||| ||||| |||||||| Sbjct 3324 GAAGTTTATCGACCAGTCGATCTCTGCCAACACTAACTACGATCCGACGCGCTTCCCGTC 3265 Query 69967 CGACAAGGTTCCAATGATGAAGCTGCTGGAAGATCTGCTGTTTGCGTATCAGCAAGGTGT 70026 || || || || ||| | || |||| |||| ||||| || ||| | || || Sbjct 3264 CGGAAAAGTGCCGATGCAGCAGTTGCTCAAAGACCTGCTCAACGCCTATAAATTCGGCGT 3205 Query 70027 GAAGACGCTTTATTACCACAACACGCGTGATGGCGCTG 70064 || ||||| || || |||||||| ||||||||||||| Sbjct 3204 CAAAACGCTGTACTATCACAACACCCGTGATGGCGCTG 3167 Score = 295 bits (326), Expect = 4e-75 Identities = 484/695 (70%), Gaps = 22/695 (3%) Strand=Plus/Minus Query 70308 GGAACCTATGTTCCTCGGCCAGTCTGTCAACGTAGCACGCTACGATCAGCAAAAGTACCG 70367 |||||||||||| | |||||| | || ||||| || ||||||||||||||||| ||| Sbjct 2950 GGAACCTATGTTTTTTGGCCAGCCGGTTAACGTGGCCCGCTACGATCAGCAAAAATACGA 2891 Query 70368 TGACTTCGAAAAGCTGATTGAAAAACAACTTTCGTTCTTCTGGCGCCCTGAAGAAGTCGA 70427 ||| ||||||||||||||||| || || || |||||||||||||| ||||| || || Sbjct 2890 CATCTTTGAAAAGCTGATTGAAAAGCAGCTCTCCTTCTTCTGGCGCCCGGAAGAGGTTGA 2831 Query 70428 CATTACCACTGACCGCATCGACTTCAATACCAAGCTGCAAGAGCACGAGCGCCATATTTT 70487 | || || || |||||||||| | | | ||||| || || || |||||||| Sbjct 2830 CGTTTCCCGCGATCGCATCGACTACCAGGC---GCTGCCGGAACATGAAAAACATATTTT 2774 Query 70488 CCTGAGCAACCTGCGTTACCAGACGCTGTTGGATTCCGTTCAGGGTCGCAGTCCTAACGC 70547 | | ||||||||| |||||||||||| | || ||| | ||||| || || || || | Sbjct 2773 CATCAGCAACCTGAAGTACCAGACGCTGCTCGACTCCATCCAGGGCCGTAGCCCGAATGT 2714 Query 70548 AACACTGCTGCCGCTGATCTCCATTCCTGAGCTGGAGACATGGGTCGAGACCTGGTCGTT 70607 | ||||||||||||||||||| || ||||||||||| ||||| || |||||| | || Sbjct 2713 GGCGTTGCTGCCGCTGATCTCCATCCCGGAGCTGGAGACCTGGGTAGAAACCTGGGCCTT 2654 Query 70608 CTCCGAGACGATTCACAGCCGCAGCTATACGCACATTATCCGCGGTATGGTGGATGACCC 70667 ||||||||| |||||| || || || ||||| |||||| || || | ||||| Sbjct 2653 CTCCGAGACCATTCACTCGCGTTCGTACACTCACATCATCCGCAACATCGTCAACGACCC 2594 Query 70668 TAGCATCGTTTTCGACGGCATCGTCACGGACGAAGAGATCATCAGCCGGGCTGTAAGCAT 70727 | ||| ||||||| ||||||||| |||| ||||| | || || | | |||| Sbjct 2593 GGCGACCGTGTTCGACGACATCGTCACCAACGAGCAGATCCAGAAACGTGCGGAAGGCAT 2534 Query 70728 CTCAAGCGAATATGACAGACTGTACGAAATGACCTGCGCTCGCCAGCATCTTGGCGAAGA 70787 ||| | | || || ||| |||||||||| || | || | || ||||||| Sbjct 2533 CTCTCACTATTACGATTCGCTGATCGAAATGACCAGCTACTGGCATCTGCTGGGCGAAGG 2474 Query 70788 C-----GAATTTGAACGGCTGTA---TGTCAGCGAGTTTGATGGCAAGCCCTACCCTCTC 70839 | | | |||||| | || | | || | || || ||| | Sbjct 2473 CACCCACACCGTCAACGGCAAAACCGTGACCGTGAATCTG--CGCGAGCTGAA---AAAG 2419 Query 70840 CAGCGCCAGCTGTTCCGAACACTGGTGTCGGTGAATGCACTGGAGGCGATTCGCTTCTAC 70899 | | | | |||| | ||| || || ||||| ||||| ||||| ||||||||| Sbjct 2418 AAACTCTATCTGTGC------CTGATGAGCGTTAATGCCCTGGAAGCGATCCGCTTCTAC 2365 Query 70900 GTGAGCTTTGCGTGTACGTTCGCCTTTGGTGAGCGGAAGCTGCTGGAGGGCAACACGAAG 70959 || ||||| || || | |||||||||| || || || ||| |||| |||||| | || Sbjct 2364 GTCAGCTTCGCCTGCTCCTTCGCCTTTGCCGAACGCAAACTGATGGAAGGCAACGCCAAA 2305 Query 70960 ATCATGCGCTTTATCGCGCGCGACGAGGCTCTACA 70994 || || ||| | ||||| ||||| || || || || Sbjct 2304 ATTATCCGCCTGATCGCCCGCGATGAAGCGCTGCA 2270 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 330318325919220